BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus22_contig00038489
         (528 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subte...   139   2e-36
gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]      130   1e-31
gb|PNY10806.1| histone deacetylase [Trifolium pratense]               130   1e-31
gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]        119   8e-30
gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan]        104   2e-24
gb|PNY05793.1| histone deacetylase [Trifolium pratense]               108   6e-24
gb|PNX92906.1| retrovirus-related Pol polyprotein from transposo...   103   3e-22
gb|PNX90864.1| retrovirus-related Pol polyprotein from transposo...   101   4e-22
dbj|GAU26016.1| hypothetical protein TSUD_64040 [Trifolium subte...   102   5e-22
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   102   6e-22
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   102   6e-22
gb|PNY02599.1| retrovirus-related Pol polyprotein from transposo...   102   7e-22
gb|PNX89801.1| retrovirus-related Pol polyprotein from transposo...   100   9e-22
gb|PNX89792.1| retrovirus-related Pol polyprotein from transposo...   100   9e-22
gb|PNX79443.1| retrovirus-related Pol polyprotein from transposo...   100   1e-21
gb|PNY12956.1| retrovirus-related Pol polyprotein from transposo...   101   1e-21
gb|PNX63176.1| retrovirus-related Pol polyprotein from transposo...    98   2e-21
gb|PNX99033.1| retrovirus-related Pol polyprotein from transposo...   100   2e-21
gb|PNX94499.1| retrovirus-related Pol polyprotein from transposo...   100   2e-21
gb|PNX92752.1| histone deacetylase [Trifolium pratense]               100   2e-21

>dbj|GAU15285.1| hypothetical protein TSUD_03520 [Trifolium subterraneum]
          Length = 392

 Score =  139 bits (350), Expect = 2e-36
 Identities = 81/174 (46%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           IG+ IS+QD++D +L+GLPEEYN FVMMI+GR +SPSL ++EGLLLVQE+QLEK  QELS
Sbjct: 165 IGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLYDIEGLLLVQESQLEKFRQELS 224

Query: 349 NAPVSANLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGNQRPVCQLCG 170
               SANL H+  G    G+                          + TGN RP CQLCG
Sbjct: 225 TPSASANLAHSRGGRGNSGAR-----------GRGRSTRGRGRPAASPTGN-RPTCQLCG 272

Query: 169 KLGHSVIDCWHRYDDTFVPRHYTRPQSGKNADSSNKKEAADKPSTSTQPQVNFA 8
           K GH VIDCW+R+D+ FVP       S   +D+S  K   + P   T    NFA
Sbjct: 273 KYGHHVIDCWYRFDENFVP---APNSSVLKSDTSGPKTNHESPQACT---ANFA 320


>gb|PNY10805.1| histone deacetylase, partial [Trifolium pratense]
          Length = 720

 Score =  130 bits (326), Expect = 1e-31
 Identities = 73/139 (52%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           IG+ IS+QD++D +L+GLPEEYN FVMMI+GR +SPSL ++EGLLLVQE+QL K  QELS
Sbjct: 166 IGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLFDIEGLLLVQESQLAKFRQELS 225

Query: 349 NAPVSANLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGNQRPVCQLCG 170
               SAN+ H SNGGR G S                       ++ ++TG  RP CQLC 
Sbjct: 226 LPAASANVAH-SNGGR-GNSG---------ARGRGRSARGRGRASSSSTGT-RPTCQLCN 273

Query: 169 KLGHSVIDCWHRYDDTFVP 113
           K GH V DCW+RYD+ FVP
Sbjct: 274 KYGHHVRDCWYRYDENFVP 292


>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
          Length = 1441

 Score =  130 bits (326), Expect = 1e-31
 Identities = 73/139 (52%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           IG+ IS+QD++D +L+GLPEEYN FVMMI+GR +SPSL ++EGLLLVQE+QL K  QELS
Sbjct: 166 IGDSISEQDQIDSILEGLPEEYNPFVMMIYGRSDSPSLFDIEGLLLVQESQLAKFRQELS 225

Query: 349 NAPVSANLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGNQRPVCQLCG 170
               SAN+ H SNGGR G S                       ++ ++TG  RP CQLC 
Sbjct: 226 LPAASANVAH-SNGGR-GNSG---------ARGRGRSARGRGRASSSSTGT-RPTCQLCN 273

Query: 169 KLGHSVIDCWHRYDDTFVP 113
           K GH V DCW+RYD+ FVP
Sbjct: 274 KYGHHVRDCWYRYDENFVP 292


>gb|KYP36809.1| hypothetical protein KK1_042047 [Cajanus cajan]
          Length = 280

 Score =  119 bits (299), Expect = 8e-30
 Identities = 70/198 (35%), Positives = 101/198 (51%), Gaps = 26/198 (13%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ ++DQD++D +LDGLPE+YNSF+MMI+GR +S S+++VE LLLVQEAQLEK+ Q+L+
Sbjct: 78  VGDLVTDQDQIDTILDGLPEDYNSFIMMIYGRSDSISVTDVESLLLVQEAQLEKYRQDLT 137

Query: 349 NAPVSANLVH----------------------TSNGGRYGGSNHXXXXXXXXXXXXXXXX 236
           +  VS N+V                       ++ GGRY G  +                
Sbjct: 138 SPSVSVNVVQGPQDSQFQSQSQFVSNRGGFQFSTRGGRYRGGRYRCRGRNRCGGRYRGGR 197

Query: 235 XXXXXSTEAATGNQRPVCQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQSGKNADSSNKKE 56
                      G QRP CQLC K GH    CW+R+D+ F+     +P    N        
Sbjct: 198 YRGRGRNRG--GGQRPTCQLCYKYGHDAFHCWNRFDEAFI-----QPSQPPNLSQRQGHG 250

Query: 55  AADKPS---TSTQPQVNF 11
           +A +P    T+  PQ +F
Sbjct: 251 SAQQPQAFVTTQTPQGSF 268


>gb|KYP36193.1| hypothetical protein KK1_042704 [Cajanus cajan]
          Length = 221

 Score =  104 bits (259), Expect = 2e-24
 Identities = 60/154 (38%), Positives = 82/154 (53%), Gaps = 23/154 (14%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +GE +++QD++D +LDGLPE+YNSFVMMI+GR +S S+++VE LLLVQEAQLEK+ Q+L+
Sbjct: 78  VGELVTNQDQIDTILDGLPEDYNSFVMMIYGRSDSISVTDVESLLLVQEAQLEKYRQDLT 137

Query: 349 NAPVSANLVH----------------------TSNGGRYGGSNHXXXXXXXXXXXXXXXX 236
           +  VS N V                       ++ GGRY G  +                
Sbjct: 138 SPSVSVNAVQGPQDSHFQSQSQFVSNRGGFQFSNRGGRYCGGRYRGRGRNRG-------- 189

Query: 235 XXXXXSTEAATGNQRPVCQLCGKLGHSVIDCWHR 134
                      G QRP CQLC K G+    CW+R
Sbjct: 190 -----------GGQRPTCQLCYKYGYDAFHCWNR 212


>gb|PNY05793.1| histone deacetylase [Trifolium pratense]
          Length = 1485

 Score =  108 bits (269), Expect = 6e-24
 Identities = 64/180 (35%), Positives = 88/180 (48%), Gaps = 7/180 (3%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           IG+ +SDQ+ +D +L+GLPEE+NSFVMMI+ R ++P++ +VE LL+VQEAQ EK  QEL+
Sbjct: 187 IGDTVSDQEHIDAILEGLPEEFNSFVMMIYSRLDTPTVEDVEALLMVQEAQFEKFRQELA 246

Query: 349 NAPVSANLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATG------NQRP 188
           +  VSANL  +         NH                           G      +   
Sbjct: 247 SPNVSANLAQSEAKTSAESVNHENTEVGTEHYAAGGKGRGRGRGRGRGRGRSSKNPHSDS 306

Query: 187 VCQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQSGKNADSSNKKEAADKPSTSTQPQVNFA 8
            CQ+CGK GH    CW+RYD    P+ +  P     A SSN        +   +P  N A
Sbjct: 307 TCQICGKNGHEASGCWYRYDPNPTPKQFKFPGF---ASSSNPSMRPPSYNPYMRPNANLA 363


>gb|PNX92906.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1196

 Score =  103 bits (256), Expect = 3e-22
 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 10/142 (7%)
 Frame = -3

Query: 523 GEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELSN 347
           G+ +++++++D +L+GLPEE+NSFVMM++ R E+PS+ E+E LLL+QEAQ EK  QEL+N
Sbjct: 153 GDVVTEKEQVDAILEGLPEEFNSFVMMVYSRSENPSVEEIEALLLLQEAQFEKFRQELAN 212

Query: 346 APVSANLVHTSNG---------GRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGNQ 194
             VSAN+               G+  G+ H                       ++A  N 
Sbjct: 213 PSVSANVAQVETASNSPNMDLEGQESGTEH-YNVNAYRGRGRGKGRGRGKGKAQSAPNNG 271

Query: 193 RPVCQLCGKLGHSVIDCWHRYD 128
           +  CQ+C K  H  I+CW+RYD
Sbjct: 272 KVQCQICSKPNHEAINCWYRYD 293


>gb|PNX90864.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 401

 Score =  101 bits (252), Expect = 4e-22
 Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S Q+++D VL+GLPEEYNSFVM+++ R E+P++ +VE LLL+QE Q EK  QEL+
Sbjct: 174 VGDVVSVQEQVDAVLEGLPEEYNSFVMLVYSRFETPTVEDVEALLLLQEVQFEKFRQELT 233

Query: 349 NAPVSANLVHTSNGG---------RYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSAN+ H ++           +  G+ H                     +  A T  
Sbjct: 234 NPSVSANVAHMNSKSNSPNQEGESQESGTEHYYANANRGRGRGKGRGRGRGKAQIAPTSG 293

Query: 196 QRPVCQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQSGKNADSSNK 62
            +  CQ+CGK  H   +CWHRY     P        G NA +S++
Sbjct: 294 -KVQCQICGKSNHDAANCWHRY----APPSSRTNARGYNAGNSSR 333


>dbj|GAU26016.1| hypothetical protein TSUD_64040 [Trifolium subterraneum]
          Length = 942

 Score =  102 bits (254), Expect = 5e-22
 Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           + E +S+Q+++D +LDGLPE++NSFVMM++ R ++P++ ++EGLL++QEAQ EK  QEL+
Sbjct: 175 MSEVVSEQEQVDAILDGLPEDFNSFVMMVYSRFDTPTVEDIEGLLMLQEAQFEKFRQELA 234

Query: 349 NAPVSANLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGNQRPV----- 185
           N  VSAN+    +   +   +                         A   ++ P+     
Sbjct: 235 NPNVSANVAQMESKNHHSNQDTEDTESVNESYGSNTYRGRGRGKGRARGRDKAPITPNAG 294

Query: 184 ---CQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQSGKNADSSNKKEAADKPSTSTQPQVN 14
              CQ+C K  H   +CW+RYD          P S  NA   N        STS QPQ N
Sbjct: 295 KVQCQICAKHNHDAANCWYRYDP---------PSSRYNARGYN------AGSTSRQPQYN 339


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  102 bits (254), Expect = 6e-22
 Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S+Q+++D +L+GLPEE+NSFVMM++ R ++P++ +VE LLL+QEAQ EK  QEL+
Sbjct: 139 VGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELT 198

Query: 349 NAPVSANLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEA-------ATGNQR 191
           +  VSAN+ HT        S H                                A    +
Sbjct: 199 SPSVSANVAHTETNASDSNSEHESQELGTEHYNVNANRGRGRGKGRGRGRGKGQAQNQGK 258

Query: 190 PVCQLCGKLGHSVIDCWHRYD 128
             CQ+C K  H  I+CW+RYD
Sbjct: 259 VKCQICAKPNHDAINCWYRYD 279


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Glycine soja]
          Length = 1417

 Score =  102 bits (254), Expect = 6e-22
 Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S+Q+++D +L+GLPEE+NSFVMM++ R ++P++ +VE LLL+QEAQ EK  QEL+
Sbjct: 139 VGDMVSEQEQVDSILEGLPEEFNSFVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELT 198

Query: 349 NAPVSANLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEA-------ATGNQR 191
           +  VSAN+ HT        S H                                A    +
Sbjct: 199 SPSVSANVAHTETNASDSNSEHESQELGTEHYNVNANRGRGRGKGRGRGRGKGQAQNQGK 258

Query: 190 PVCQLCGKLGHSVIDCWHRYD 128
             CQ+C K  H  I+CW+RYD
Sbjct: 259 VKCQICAKPNHDAINCWYRYD 279


>gb|PNY02599.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 956

 Score =  102 bits (253), Expect = 7e-22
 Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 10/160 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S+Q+++D +L+GLPEE+NSFVMMI+ R +SP++ +VE LLL+QEAQ EK  QELS
Sbjct: 181 VGDVVSEQEQVDAILEGLPEEFNSFVMMIYSRFDSPTVEDVEALLLLQEAQFEKFKQELS 240

Query: 349 NAPVSANLVHTSNGG---------RYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
              VSA++ HT                G+ H                     S  +A G 
Sbjct: 241 TPTVSAHVAHTEAKSSESVNDQDLSEAGTAHYNVNSNRGRGKGKSRGRGRGRSQSSAQGK 300

Query: 196 QRPVCQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQSGKNA 77
            +  CQ+CGK  H  I  WH+YD    P     P  G NA
Sbjct: 301 VQ--CQICGKPNHDAIGYWHKYD----PSTMRTPNRGYNA 334


>gb|PNX89801.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 403

 Score =  100 bits (249), Expect = 9e-22
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S+Q+++D +L+GLPEE+NSFVMM++ R ESP++ +VE LLL+QE Q EK  QEL+
Sbjct: 175 VGDTVSEQEQVDAILEGLPEEFNSFVMMVYSRFESPTVEDVEALLLLQEVQFEKFRQELT 234

Query: 349 NAPVSANLVHTSNGGRYG---------GSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSAN+ H  +              G+ H                       +  + +
Sbjct: 235 NPSVSANIAHKESKNSNSSDDADEQEIGTEH-YNVNVSRGRGRGKGRGRGRGKAQFKSNS 293

Query: 196 QRPVCQLCGKLGHSVIDCWHRYD 128
           ++  CQ+C K  H   +CWHRY+
Sbjct: 294 KKVQCQICAKPNHDAANCWHRYE 316


>gb|PNX89792.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 403

 Score =  100 bits (249), Expect = 9e-22
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S+Q+++D +L+GLPEE+NSFVMM++ R ESP++ +VE LLL+QE Q EK  QEL+
Sbjct: 175 VGDTVSEQEQVDAILEGLPEEFNSFVMMVYSRFESPTVEDVEALLLLQEVQFEKFRQELT 234

Query: 349 NAPVSANLVHTSNGGRYG---------GSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSAN+ H  +              G+ H                       +  + +
Sbjct: 235 NPSVSANIAHKESKNSNSSDDADEQEIGTEH-YNVNVSRGRGRGKGRGRGRGKAQFKSNS 293

Query: 196 QRPVCQLCGKLGHSVIDCWHRYD 128
           ++  CQ+C K  H   +CWHRY+
Sbjct: 294 KKVQCQICAKPNHDAANCWHRYE 316


>gb|PNX79443.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 429

 Score =  100 bits (249), Expect = 1e-21
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S+Q+++D +L+GLPEE+NSFVMM++ R ESP++ +VE LLL+QE Q EK  QEL+
Sbjct: 1   VGDTVSEQEQVDAILEGLPEEFNSFVMMVYSRFESPTVEDVEALLLLQEVQFEKFRQELT 60

Query: 349 NAPVSANLVHTSNGGRYG---------GSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSAN+ H  +              G+ H                       +  + +
Sbjct: 61  NPSVSANIAHKESKNSNSSDDADEQEIGTEH-YNVNVSRGRGRGKGRGRGRGKAQFKSNS 119

Query: 196 QRPVCQLCGKLGHSVIDCWHRYD 128
           ++  CQ+C K  H   +CWHRY+
Sbjct: 120 KKVQCQICAKPNHDAANCWHRYE 142


>gb|PNY12956.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 823

 Score =  101 bits (251), Expect = 1e-21
 Identities = 60/166 (36%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +++Q+++D +L+GLPE++NSFVMM++ R E+P + +VE LLL+QE Q EK  QEL+
Sbjct: 170 VGDVVTEQEQVDAILEGLPEDFNSFVMMVYSRFETPKVEDVEALLLLQEVQFEKFRQELT 229

Query: 349 NAPVSA---------NLVHTSNGGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSA         N ++ +   +  G+ H                       +AA   
Sbjct: 230 NPNVSAHVAQSETRSNNLNMTTEEQELGTEHYNVAVNRGRGRGKGXXGRGRGKAQAAPNT 289

Query: 196 QRPVCQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQS-GKNADSSNK 62
            +  CQ+CGK  H  I CW+RYD         +PQS G NA +S++
Sbjct: 290 GKAQCQICGKSNHEAIICWYRYDP-------PKPQSRGYNAANSSR 328


>gb|PNX63176.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 273

 Score = 97.8 bits (242), Expect = 2e-21
 Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           IG+ +S+QD++D +LDGLPEEYN FVMM++GR +SPSL ++EGLLLVQE+QLEK  QEL+
Sbjct: 188 IGDSVSEQDQIDSILDGLPEEYNPFVMMMYGRSDSPSLFDIEGLLLVQESQLEKFRQELA 247

Query: 349 NAPVSANLVHTSNGGRYGGS 290
               SAN+ HT  G    GS
Sbjct: 248 VPNASANVAHTKGGRNSSGS 267


>gb|PNX99033.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1101

 Score =  100 bits (250), Expect = 2e-21
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 10/143 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S+Q+++D +L+GLPEE+NSFVMM++ R +SP++ +VE LLL+QEAQ EK  QELS
Sbjct: 175 VGDSVSEQEQVDAILEGLPEEFNSFVMMVYSRFDSPTVEDVEALLLLQEAQFEKFKQELS 234

Query: 349 NAPVSANLVHTSNGGRYG---------GSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSAN+ H                  S H                     +   + G 
Sbjct: 235 NPSVSANVAHADAQSSDSVNNQDLPETASEHYNVNVHRGRGRGKGKGRGRGRNQHQSQG- 293

Query: 196 QRPVCQLCGKLGHSVIDCWHRYD 128
            +  CQ+C K  H  I+CW+RYD
Sbjct: 294 -KVECQICSKSNHDAINCWYRYD 315


>gb|PNX94499.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1434

 Score =  100 bits (250), Expect = 2e-21
 Identities = 59/165 (35%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ ++ Q++ D +L+GLPEE+NSFVMMI+ R ESP++ E+E LLL+QEAQ EK  QEL+
Sbjct: 176 VGDVVTVQEQADAILEGLPEEFNSFVMMIYSRFESPTVEEIEALLLLQEAQFEKFRQELA 235

Query: 349 NAPVSANLVHTSNGG---------RYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSAN+                +  G+ H                     +   A G 
Sbjct: 236 NPSVSANVAKVDTNSNNPSVDSEDQESGTEHYYVTASRGRGRGKGRGRGRGKAQAVAAGG 295

Query: 196 QRPVCQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQSGKNADSSNK 62
            +  CQ+CGK  H    CW+RYD      H      G NA  S++
Sbjct: 296 -KVQCQICGKPNHEAAGCWYRYDPPTAKPH----ARGYNAGQSSR 335


>gb|PNX92752.1| histone deacetylase [Trifolium pratense]
          Length = 1455

 Score =  100 bits (250), Expect = 2e-21
 Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
 Frame = -3

Query: 526 IGEPISDQDKLDVVLDGLPEEYNSFVMMIFGR-ESPSLSEVEGLLLVQEAQLEKHNQELS 350
           +G+ +S Q+++D +L+GLPEE+NSFVMMI+ R E+P++ +VE LLL+QE Q EK  QEL+
Sbjct: 172 VGDVVSVQEQVDAILEGLPEEFNSFVMMIYSRFETPTVEDVEALLLLQEVQFEKFRQELA 231

Query: 349 NAPVSANLVHT---SN------GGRYGGSNHXXXXXXXXXXXXXXXXXXXXXSTEAATGN 197
           N  VSAN+ HT   SN        +  G+ H                      T+ +  N
Sbjct: 232 NPSVSANIAHTEVHSNEPVMEAANQESGTEHYNATANRGRGRGKGKGRGRGR-TQNSHNN 290

Query: 196 QRPVCQLCGKLGHSVIDCWHRYDDTFVPRHYTRPQSGKNADSSNKKEAADKP 41
            +  CQ+C +  H    CW+RYD +       +PQ+     SSN + +   P
Sbjct: 291 GKVHCQICDRPNHDATICWYRYDSS-----NAKPQARGYNTSSNPRPSHFNP 337