BLASTX nr result

ID: Angelica27_contig00040216 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00040216
         (430 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017241357.1 PREDICTED: transcription termination factor MTERF...    85   1e-16
KZN11154.1 hypothetical protein DCAR_003810 [Daucus carota subsp...    85   1e-16
XP_017237381.1 PREDICTED: transcription termination factor MTEF1...    83   7e-16
XP_017241692.1 PREDICTED: transcription termination factor MTERF...    58   5e-07
XP_017240264.1 PREDICTED: uncharacterized protein LOC108213040 [...    58   5e-07
KZN11150.1 hypothetical protein DCAR_003806 [Daucus carota subsp...    57   1e-06
XP_017230185.1 PREDICTED: uncharacterized protein LOC108204973 i...    57   1e-06
XP_017230184.1 PREDICTED: uncharacterized protein LOC108204973 i...    57   1e-06
XP_017230183.1 PREDICTED: uncharacterized protein LOC108204973 i...    57   1e-06
XP_017230180.1 PREDICTED: uncharacterized protein LOC108204973 i...    57   1e-06

>XP_017241357.1 PREDICTED: transcription termination factor MTERF8,
           chloroplastic-like [Daucus carota subsp. sativus]
          Length = 400

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 47/82 (57%), Positives = 52/82 (63%)
 Frame = -1

Query: 247 ILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNADS 68
           +LV M+ SHLQTL  KH TLPNLN+C IRPI  S + KR                   DS
Sbjct: 3   MLVCMFKSHLQTLIIKHQTLPNLNHCLIRPIFRSYSPKR-----------------TIDS 45

Query: 67  SEFKISFLKNKCGLSGKDLVRA 2
           SEFKISFLKNKCGLSGK L+RA
Sbjct: 46  SEFKISFLKNKCGLSGKHLIRA 67


>KZN11154.1 hypothetical protein DCAR_003810 [Daucus carota subsp. sativus]
          Length = 424

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 47/82 (57%), Positives = 52/82 (63%)
 Frame = -1

Query: 247 ILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNADS 68
           +LV M+ SHLQTL  KH TLPNLN+C IRPI  S + KR                   DS
Sbjct: 27  MLVCMFKSHLQTLIIKHQTLPNLNHCLIRPIFRSYSPKR-----------------TIDS 69

Query: 67  SEFKISFLKNKCGLSGKDLVRA 2
           SEFKISFLKNKCGLSGK L+RA
Sbjct: 70  SEFKISFLKNKCGLSGKHLIRA 91


>XP_017237381.1 PREDICTED: transcription termination factor MTEF1,
           chloroplastic-like isoform X1 [Daucus carota subsp.
           sativus]
          Length = 395

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 46/82 (56%), Positives = 51/82 (62%)
 Frame = -1

Query: 247 ILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNADS 68
           +LV M+ SHLQTL   H TLPNLN+C IRPI  S + KR                   DS
Sbjct: 3   MLVCMFKSHLQTLIINHRTLPNLNHCLIRPIFRSYSPKR-----------------TIDS 45

Query: 67  SEFKISFLKNKCGLSGKDLVRA 2
           SEFKISFLKNKCGLSGK L+RA
Sbjct: 46  SEFKISFLKNKCGLSGKHLIRA 67


>XP_017241692.1 PREDICTED: transcription termination factor MTERF2,
           chloroplastic-like [Daucus carota subsp. sativus]
          Length = 399

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = -1

Query: 250 LILVNMYNSHLQTLNFKHPTLPNL-NYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNA 74
           ++LV +Y S LQ L  KH  L  L N C   PI  +  TK          TT    PTNA
Sbjct: 3   MMLVYIYKSRLQALTAKHLDLHILKNLCLKTPIFRNYRTK---------TTT----PTNA 49

Query: 73  DSSEFKISFLKNKCGLSGKDLVRA 2
           +SSEFKISFL+N+ GLS K L+RA
Sbjct: 50  ESSEFKISFLQNEYGLSKKSLIRA 73


>XP_017240264.1 PREDICTED: uncharacterized protein LOC108213040 [Daucus carota
           subsp. sativus]
          Length = 402

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 37/83 (44%), Positives = 46/83 (55%)
 Frame = -1

Query: 250 LILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNAD 71
           L+LV +Y     TL  KH T      C  +PII S ++KRI PI             N D
Sbjct: 3   LLLVYLYIRQSLTLVTKHQTFRTS--CLAKPIIRSYSSKRIIPI-------------NVD 47

Query: 70  SSEFKISFLKNKCGLSGKDLVRA 2
           S++FK+ FLKNKCGLSGK L+ A
Sbjct: 48  SADFKLWFLKNKCGLSGKPLLNA 70


>KZN11150.1 hypothetical protein DCAR_003806 [Daucus carota subsp. sativus]
          Length = 396

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -1

Query: 250 LILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNAD 71
           ++LV +Y    +T N KH T  NLN C + PII    TK+I               + AD
Sbjct: 2   MMLVYLYKRQSKTSNVKHETFHNLNQCLLGPIIRCYRTKKI--------------ISAAD 47

Query: 70  SSEFKISFLKNKCGLSGKDLVRA 2
            + F+  FLKNKCGLSG+  +R+
Sbjct: 48  QTAFRTLFLKNKCGLSGEAAIRS 70


>XP_017230185.1 PREDICTED: uncharacterized protein LOC108204973 isoform X4 [Daucus
           carota subsp. sativus]
          Length = 400

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -1

Query: 250 LILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNAD 71
           ++LV +Y    +T N KH T  NLN C + PII    TK+I               + AD
Sbjct: 2   MMLVYLYKRQSKTSNVKHETFHNLNQCLLGPIIRCYRTKKI--------------ISAAD 47

Query: 70  SSEFKISFLKNKCGLSGKDLVRA 2
            + F+  FLKNKCGLSG+  +R+
Sbjct: 48  QTAFRTLFLKNKCGLSGEAAIRS 70


>XP_017230184.1 PREDICTED: uncharacterized protein LOC108204973 isoform X3 [Daucus
           carota subsp. sativus]
          Length = 401

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -1

Query: 250 LILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNAD 71
           ++LV +Y    +T N KH T  NLN C + PII    TK+I               + AD
Sbjct: 2   MMLVYLYKRQSKTSNVKHETFHNLNQCLLGPIIRCYRTKKI--------------ISAAD 47

Query: 70  SSEFKISFLKNKCGLSGKDLVRA 2
            + F+  FLKNKCGLSG+  +R+
Sbjct: 48  QTAFRTLFLKNKCGLSGEAAIRS 70


>XP_017230183.1 PREDICTED: uncharacterized protein LOC108204973 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 404

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -1

Query: 250 LILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNAD 71
           ++LV +Y    +T N KH T  NLN C + PII    TK+I               + AD
Sbjct: 2   MMLVYLYKRQSKTSNVKHETFHNLNQCLLGPIIRCYRTKKI--------------ISAAD 47

Query: 70  SSEFKISFLKNKCGLSGKDLVRA 2
            + F+  FLKNKCGLSG+  +R+
Sbjct: 48  QTAFRTLFLKNKCGLSGEAAIRS 70


>XP_017230180.1 PREDICTED: uncharacterized protein LOC108204973 isoform X1 [Daucus
           carota subsp. sativus] XP_017230181.1 PREDICTED:
           uncharacterized protein LOC108204973 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 429

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = -1

Query: 250 LILVNMYNSHLQTLNFKHPTLPNLNYCSIRPIIYSVTTKRIQPIIICSVTTKRIQPTNAD 71
           ++LV +Y    +T N KH T  NLN C + PII    TK+I               + AD
Sbjct: 2   MMLVYLYKRQSKTSNVKHETFHNLNQCLLGPIIRCYRTKKI--------------ISAAD 47

Query: 70  SSEFKISFLKNKCGLSGKDLVRA 2
            + F+  FLKNKCGLSG+  +R+
Sbjct: 48  QTAFRTLFLKNKCGLSGEAAIRS 70


Top