BLASTX nr result

ID: Angelica27_contig00040204 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00040204
         (265 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017218766.1 PREDICTED: DNA ligase 6 isoform X2 [Daucus carota...   100   6e-23
XP_017218765.1 PREDICTED: DNA ligase 6 isoform X1 [Daucus carota...   100   6e-23
KZM88814.1 hypothetical protein DCAR_025889 [Daucus carota subsp...   100   6e-23

>XP_017218766.1 PREDICTED: DNA ligase 6 isoform X2 [Daucus carota subsp. sativus]
          Length = 1152

 Score =  100 bits (250), Expect = 6e-23
 Identities = 55/87 (63%), Positives = 59/87 (67%)
 Frame = -3

Query: 263 LAPDTGAPGIRVEKSPLSMKFNSLGTKPAIKHNISXXXXXXXXXXXXXXXXRTGSSKELT 84
           L PDT A   R EKSPLS++FNSLGTKPAIKH+IS                RTGSSKE T
Sbjct: 524 LTPDTKAHDTRAEKSPLSLRFNSLGTKPAIKHDISPAKKKRNIKNKPSKRARTGSSKEAT 583

Query: 83  EPKQNTITKFFSKLVYPDPEGDKLVNV 3
            P Q+TITKFFSKLV PDP  DKLVNV
Sbjct: 584 VPTQHTITKFFSKLVCPDPGADKLVNV 610


>XP_017218765.1 PREDICTED: DNA ligase 6 isoform X1 [Daucus carota subsp. sativus]
          Length = 1401

 Score =  100 bits (250), Expect = 6e-23
 Identities = 55/87 (63%), Positives = 59/87 (67%)
 Frame = -3

Query: 263 LAPDTGAPGIRVEKSPLSMKFNSLGTKPAIKHNISXXXXXXXXXXXXXXXXRTGSSKELT 84
           L PDT A   R EKSPLS++FNSLGTKPAIKH+IS                RTGSSKE T
Sbjct: 524 LTPDTKAHDTRAEKSPLSLRFNSLGTKPAIKHDISPAKKKRNIKNKPSKRARTGSSKEAT 583

Query: 83  EPKQNTITKFFSKLVYPDPEGDKLVNV 3
            P Q+TITKFFSKLV PDP  DKLVNV
Sbjct: 584 VPTQHTITKFFSKLVCPDPGADKLVNV 610


>KZM88814.1 hypothetical protein DCAR_025889 [Daucus carota subsp. sativus]
          Length = 1407

 Score =  100 bits (250), Expect = 6e-23
 Identities = 55/87 (63%), Positives = 59/87 (67%)
 Frame = -3

Query: 263 LAPDTGAPGIRVEKSPLSMKFNSLGTKPAIKHNISXXXXXXXXXXXXXXXXRTGSSKELT 84
           L PDT A   R EKSPLS++FNSLGTKPAIKH+IS                RTGSSKE T
Sbjct: 524 LTPDTKAHDTRAEKSPLSLRFNSLGTKPAIKHDISPAKKKRNIKNKPSKRARTGSSKEAT 583

Query: 83  EPKQNTITKFFSKLVYPDPEGDKLVNV 3
            P Q+TITKFFSKLV PDP  DKLVNV
Sbjct: 584 VPTQHTITKFFSKLVCPDPGADKLVNV 610


Top