BLASTX nr result

ID: Angelica27_contig00033535 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00033535
         (225 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017237137.1 PREDICTED: nuclear pore complex protein NUP88 [Da...    72   5e-13
XP_012855492.1 PREDICTED: nuclear pore complex protein NUP88 [Er...    58   5e-08
XP_018821834.1 PREDICTED: nuclear pore complex protein NUP88 iso...    56   2e-07
KVI09973.1 Nucleoporin Nup88 [Cynara cardunculus var. scolymus]        56   2e-07
XP_018821833.1 PREDICTED: nuclear pore complex protein NUP88 iso...    56   2e-07
XP_011084912.1 PREDICTED: LOW QUALITY PROTEIN: nuclear pore comp...    55   3e-07
XP_006378662.1 hypothetical protein POPTR_0010s19700g [Populus t...    54   8e-07
KDO68998.1 hypothetical protein CISIN_1g003591mg [Citrus sinensis]     54   1e-06
XP_006435724.1 hypothetical protein CICLE_v10030725mg [Citrus cl...    54   1e-06
XP_009344829.1 PREDICTED: nuclear pore complex protein NUP88 [Py...    54   2e-06
OAY38426.1 hypothetical protein MANES_10G013600 [Manihot esculenta]    53   2e-06
XP_010262847.1 PREDICTED: nuclear pore complex protein NUP88 iso...    53   2e-06
OAY38427.1 hypothetical protein MANES_10G013600 [Manihot esculenta]    53   2e-06
XP_010262845.1 PREDICTED: nuclear pore complex protein NUP88 iso...    53   2e-06
XP_012087570.1 PREDICTED: nuclear pore complex protein NUP88 [Ja...    53   3e-06
XP_002271517.1 PREDICTED: nuclear pore complex protein NUP88 [Vi...    53   3e-06
XP_019439391.1 PREDICTED: nuclear pore complex protein NUP88 [Lu...    52   4e-06
XP_004308934.1 PREDICTED: nuclear pore complex protein NUP88 [Fr...    52   4e-06
XP_019197885.1 PREDICTED: nuclear pore complex protein NUP88 [Ip...    52   5e-06
XP_011035953.1 PREDICTED: nuclear pore complex protein NUP88-lik...    52   5e-06

>XP_017237137.1 PREDICTED: nuclear pore complex protein NUP88 [Daucus carota subsp.
           sativus] KZN03051.1 hypothetical protein DCAR_011807
           [Daucus carota subsp. sativus]
          Length = 796

 Score = 72.0 bits (175), Expect = 5e-13
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDSTDF 104
           +DQIS LRSAVEKLSLVNSENTEKVKMVESALKSRDSTD+
Sbjct: 757 NDQISRLRSAVEKLSLVNSENTEKVKMVESALKSRDSTDY 796


>XP_012855492.1 PREDICTED: nuclear pore complex protein NUP88 [Erythranthe guttata]
           EYU22347.1 hypothetical protein MIMGU_mgv1a001479mg
           [Erythranthe guttata]
          Length = 811

 Score = 57.8 bits (138), Expect = 5e-08
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDSTD 107
           DD IS L+S++ KLSL+NSEN++KVK+VESALKSRD TD
Sbjct: 773 DDNISQLKSSLAKLSLLNSENSKKVKLVESALKSRDITD 811


>XP_018821834.1 PREDICTED: nuclear pore complex protein NUP88 isoform X2 [Juglans
           regia]
          Length = 712

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDSTDF 104
           D  IS L+S++EKLSLVNSENT+K K+VE+ALKSR+S+ F
Sbjct: 673 DTHISQLKSSLEKLSLVNSENTKKAKLVEAALKSRESSRF 712


>KVI09973.1 Nucleoporin Nup88 [Cynara cardunculus var. scolymus]
          Length = 740

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 25/38 (65%), Positives = 36/38 (94%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDST 110
           DD+IS L+S++ KLS+VNSENT+KVK+V+SAL++R+ST
Sbjct: 702 DDEISRLKSSIAKLSIVNSENTKKVKLVDSALRNREST 739


>XP_018821833.1 PREDICTED: nuclear pore complex protein NUP88 isoform X1 [Juglans
           regia]
          Length = 803

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDSTDF 104
           D  IS L+S++EKLSLVNSENT+K K+VE+ALKSR+S+ F
Sbjct: 764 DTHISQLKSSLEKLSLVNSENTKKAKLVEAALKSRESSRF 803


>XP_011084912.1 PREDICTED: LOW QUALITY PROTEIN: nuclear pore complex protein NUP88
           [Sesamum indicum]
          Length = 811

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 25/39 (64%), Positives = 36/39 (92%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDSTD 107
           +D+IS L+S++EKLSL+NSEN+ KVK+VESAL+SR+ +D
Sbjct: 773 EDEISQLKSSLEKLSLINSENSRKVKLVESALRSREISD 811


>XP_006378662.1 hypothetical protein POPTR_0010s19700g [Populus trichocarpa]
           ERP56459.1 hypothetical protein POPTR_0010s19700g
           [Populus trichocarpa]
          Length = 807

 Score = 54.3 bits (129), Expect = 8e-07
 Identities = 26/38 (68%), Positives = 35/38 (92%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDST 110
           D QIS L+S++ KLSLVNSENT+KVK+VESALK+++S+
Sbjct: 769 DAQISQLKSSITKLSLVNSENTKKVKLVESALKNQESS 806


>KDO68998.1 hypothetical protein CISIN_1g003591mg [Citrus sinensis]
          Length = 808

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDSTDF 104
           D QIS LRS +EKLSLVNSEN +KVK+VESALK ++S+ +
Sbjct: 769 DAQISQLRSLMEKLSLVNSENLKKVKLVESALKKQESSRY 808


>XP_006435724.1 hypothetical protein CICLE_v10030725mg [Citrus clementina]
           XP_006486326.1 PREDICTED: nuclear pore complex protein
           NUP88 [Citrus sinensis] ESR48964.1 hypothetical protein
           CICLE_v10030725mg [Citrus clementina]
          Length = 808

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDSTDF 104
           D QIS LRS +EKLSLVNSEN +KVK+VESALK ++S+ +
Sbjct: 769 DAQISQLRSLMEKLSLVNSENLKKVKLVESALKKQESSRY 808


>XP_009344829.1 PREDICTED: nuclear pore complex protein NUP88 [Pyrus x
           bretschneideri]
          Length = 809

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 24/38 (63%), Positives = 36/38 (94%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDST 110
           + Q+S L+S++EKLSL+NSEN++KVK+VESALKSR+++
Sbjct: 770 ESQVSQLKSSLEKLSLLNSENSKKVKLVESALKSRETS 807


>OAY38426.1 hypothetical protein MANES_10G013600 [Manihot esculenta]
          Length = 673

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 26/38 (68%), Positives = 35/38 (92%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDST 110
           D Q+S L+S++ KLSLVNSEN++KVK+VESALKSR+S+
Sbjct: 635 DIQMSQLKSSLAKLSLVNSENSKKVKLVESALKSRESS 672


>XP_010262847.1 PREDICTED: nuclear pore complex protein NUP88 isoform X2 [Nelumbo
           nucifera] XP_019053953.1 PREDICTED: nuclear pore complex
           protein NUP88 isoform X2 [Nelumbo nucifera]
          Length = 681

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 34/37 (91%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDS 113
           D Q+S LRS VEKLSLVN++N++KVK+VESAL+S++S
Sbjct: 635 DSQVSHLRSLVEKLSLVNTDNSKKVKLVESALRSQES 671


>OAY38427.1 hypothetical protein MANES_10G013600 [Manihot esculenta]
          Length = 800

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 26/38 (68%), Positives = 35/38 (92%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDST 110
           D Q+S L+S++ KLSLVNSEN++KVK+VESALKSR+S+
Sbjct: 762 DIQMSQLKSSLAKLSLVNSENSKKVKLVESALKSRESS 799


>XP_010262845.1 PREDICTED: nuclear pore complex protein NUP88 isoform X1 [Nelumbo
           nucifera]
          Length = 815

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 34/37 (91%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDS 113
           D Q+S LRS VEKLSLVN++N++KVK+VESAL+S++S
Sbjct: 769 DSQVSHLRSLVEKLSLVNTDNSKKVKLVESALRSQES 805


>XP_012087570.1 PREDICTED: nuclear pore complex protein NUP88 [Jatropha curcas]
           KDP44779.1 hypothetical protein JCGZ_01279 [Jatropha
           curcas]
          Length = 803

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 35/38 (92%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDST 110
           D Q+S L+SA+ KLSLVNSEN++KVK+VESALKS++S+
Sbjct: 764 DIQMSQLKSALAKLSLVNSENSKKVKLVESALKSQESS 801


>XP_002271517.1 PREDICTED: nuclear pore complex protein NUP88 [Vitis vinifera]
           CBI25491.3 unnamed protein product, partial [Vitis
           vinifera]
          Length = 814

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDST 110
           D QIS L+SA+ KLSLVNSEN ++VK+VESALKS++ T
Sbjct: 775 DAQISQLKSAIAKLSLVNSENAKRVKVVESALKSQERT 812


>XP_019439391.1 PREDICTED: nuclear pore complex protein NUP88 [Lupinus
           angustifolius] OIW14223.1 hypothetical protein
           TanjilG_21363 [Lupinus angustifolius]
          Length = 803

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 24/36 (66%), Positives = 35/36 (97%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRD 116
           D+QIS L+S++EKLSL+NSENT+KVK+VES+LK+++
Sbjct: 758 DNQISVLKSSLEKLSLLNSENTKKVKLVESSLKNKE 793


>XP_004308934.1 PREDICTED: nuclear pore complex protein NUP88 [Fragaria vesca
           subsp. vesca]
          Length = 808

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRD 116
           + QIS L+S +EKLSLVNSENT+KVK+VESAL+S +
Sbjct: 770 ESQISQLKSCLEKLSLVNSENTKKVKLVESALRSEE 805


>XP_019197885.1 PREDICTED: nuclear pore complex protein NUP88 [Ipomoea nil]
           XP_019197886.1 PREDICTED: nuclear pore complex protein
           NUP88 [Ipomoea nil] XP_019197887.1 PREDICTED: nuclear
           pore complex protein NUP88 [Ipomoea nil]
          Length = 811

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 23/37 (62%), Positives = 35/37 (94%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRDS 113
           D+Q++ L++++EKLSL NSENT+KVK+VESALK+R++
Sbjct: 775 DNQMTQLKASLEKLSLTNSENTKKVKLVESALKTREA 811


>XP_011035953.1 PREDICTED: nuclear pore complex protein NUP88-like [Populus
           euphratica]
          Length = 811

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 33/36 (91%)
 Frame = -3

Query: 223 DDQISSLRSAVEKLSLVNSENTEKVKMVESALKSRD 116
           D QIS L+S++ KLSLVNSENT+KVK++ESALK+++
Sbjct: 773 DAQISQLKSSITKLSLVNSENTKKVKLIESALKNQE 808


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