BLASTX nr result

ID: Angelica27_contig00033111 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00033111
         (552 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017257323.1 PREDICTED: mediator of RNA polymerase II transcri...   227   9e-68
KZM92032.1 hypothetical protein DCAR_020603 [Daucus carota subsp...   223   3e-66
XP_019077463.1 PREDICTED: mediator of RNA polymerase II transcri...    64   9e-09
XP_010653646.1 PREDICTED: mediator of RNA polymerase II transcri...    64   9e-09

>XP_017257323.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like [Daucus carota subsp. sativus]
          Length = 670

 Score =  227 bits (579), Expect = 9e-68
 Identities = 112/155 (72%), Positives = 136/155 (87%)
 Frame = +2

Query: 83  YMQMQMLRERYASELEMIYKMVKDPCPVPLSEASLTRYHKKIGVAKMIIRVLSIRKADLA 262
           ++++QMLRE Y+SE+E+I+KMVKDPCP  LS ASLTR+ KK+GVA+MI RVLS R+ADLA
Sbjct: 35  HLEIQMLRESYSSEVEIIHKMVKDPCPKALSGASLTRHQKKLGVARMITRVLSSREADLA 94

Query: 263 RYSKDKVRQRLNSIKWHLDAIRIKRHGAVSHHEQGHPPADHSTSQLQRNMNMEVISSQLD 442
           RYSKDKVRQRLN+IKWHL+AIR KR G++SHHE  HPPADH  S  Q+N NME+ISSQ+D
Sbjct: 95  RYSKDKVRQRLNTIKWHLEAIRSKRLGSMSHHEH-HPPADHFKSHSQKNDNMEMISSQMD 153

Query: 443 QGLTDQHACLPQSSIQQGFSLSQENSVSSLCTDSL 547
           QGLT+QHA LPQSSIQQGFS+S+ENS++SLC D L
Sbjct: 154 QGLTNQHASLPQSSIQQGFSVSRENSINSLCNDKL 188


>KZM92032.1 hypothetical protein DCAR_020603 [Daucus carota subsp. sativus]
          Length = 631

 Score =  223 bits (567), Expect = 3e-66
 Identities = 111/150 (74%), Positives = 131/150 (87%)
 Frame = +2

Query: 98  MLRERYASELEMIYKMVKDPCPVPLSEASLTRYHKKIGVAKMIIRVLSIRKADLARYSKD 277
           MLRE Y+SE+E+I+KMVKDPCP  LS ASLTR+ KK+GVA+MI RVLS R+ADLARYSKD
Sbjct: 1   MLRESYSSEVEIIHKMVKDPCPKALSGASLTRHQKKLGVARMITRVLSSREADLARYSKD 60

Query: 278 KVRQRLNSIKWHLDAIRIKRHGAVSHHEQGHPPADHSTSQLQRNMNMEVISSQLDQGLTD 457
           KVRQRLN+IKWHL+AIR KR G++SHHE  HPPADH  S  Q+N NME+ISSQ+DQGLT+
Sbjct: 61  KVRQRLNTIKWHLEAIRSKRLGSMSHHEH-HPPADHFKSHSQKNDNMEMISSQMDQGLTN 119

Query: 458 QHACLPQSSIQQGFSLSQENSVSSLCTDSL 547
           QHA LPQSSIQQGFS+S+ENS++SLC D L
Sbjct: 120 QHASLPQSSIQQGFSVSRENSINSLCNDKL 149


>XP_019077463.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           isoform X2 [Vitis vinifera]
          Length = 945

 Score = 64.3 bits (155), Expect = 9e-09
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
 Frame = +2

Query: 23  PLDSTSPGLHAYVDDWFIETYMQMQMLRERYASELEMIYKMVKDPCPVPLSEASLTRYHK 202
           P++ST+   +    DW+ + Y ++Q +RE+  SEL   YK V   C   L      ++  
Sbjct: 233 PVESTAHIENPNTADWYDQAYQKLQPVREKVLSELLKAYKSVHSICLKALEPGVAEKWKN 292

Query: 203 KIGVAKMIIRVLSIRKADLARYSKDKVRQRLNSIKWHLDAIRIKRHGAVSHH-EQGHPPA 379
           K    + +IR L + ++D+    KDKV    + I  +  +I  K HG+  +   Q   P 
Sbjct: 293 KKSTLEKMIRFLQLSRSDIVHCPKDKVVYYQHMILNYWSSI-CKSHGSAQNQGPQLQVPG 351

Query: 380 DHSTSQLQRNMNMEVISSQLDQGLTDQHACLPQSSIQQGFSLSQENSVS 526
             S +QLQ+  NM+   S ++   +     +   S  QG   SQ N+ S
Sbjct: 352 SQSLTQLQQQRNMKPSLSPMNLISSTPAGTISMLSTHQGVPNSQPNTSS 400


>XP_010653646.1 PREDICTED: mediator of RNA polymerase II transcription subunit 15a
           isoform X1 [Vitis vinifera]
          Length = 1095

 Score = 64.3 bits (155), Expect = 9e-09
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
 Frame = +2

Query: 23  PLDSTSPGLHAYVDDWFIETYMQMQMLRERYASELEMIYKMVKDPCPVPLSEASLTRYHK 202
           P++ST+   +    DW+ + Y ++Q +RE+  SEL   YK V   C   L      ++  
Sbjct: 383 PVESTAHIENPNTADWYDQAYQKLQPVREKVLSELLKAYKSVHSICLKALEPGVAEKWKN 442

Query: 203 KIGVAKMIIRVLSIRKADLARYSKDKVRQRLNSIKWHLDAIRIKRHGAVSHH-EQGHPPA 379
           K    + +IR L + ++D+    KDKV    + I  +  +I  K HG+  +   Q   P 
Sbjct: 443 KKSTLEKMIRFLQLSRSDIVHCPKDKVVYYQHMILNYWSSI-CKSHGSAQNQGPQLQVPG 501

Query: 380 DHSTSQLQRNMNMEVISSQLDQGLTDQHACLPQSSIQQGFSLSQENSVS 526
             S +QLQ+  NM+   S ++   +     +   S  QG   SQ N+ S
Sbjct: 502 SQSLTQLQQQRNMKPSLSPMNLISSTPAGTISMLSTHQGVPNSQPNTSS 550


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