BLASTX nr result

ID: Angelica27_contig00026537 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00026537
         (331 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM92032.1 hypothetical protein DCAR_020603 [Daucus carota subsp...   149   7e-40
XP_017257323.1 PREDICTED: mediator of RNA polymerase II transcri...   149   1e-39

>KZM92032.1 hypothetical protein DCAR_020603 [Daucus carota subsp. sativus]
          Length = 631

 Score =  149 bits (375), Expect = 7e-40
 Identities = 77/109 (70%), Positives = 87/109 (79%)
 Frame = -3

Query: 329 KKLH*MVVQKEFSLQQHKLSIQSAGYSSQSLTSSLPATDHEKQSFCAENTVPLQRPLTQV 150
           KK+  MVVQKE+ L+ HKL IQSAGYS Q LTSSLP+TDHE QSFC ENT+ LQRP+  V
Sbjct: 269 KKMQQMVVQKEYGLEHHKLCIQSAGYSPQILTSSLPSTDHENQSFCTENTIHLQRPVVPV 328

Query: 149 EQSQTAIRNYTPAGSSPEKSAFPLSIEFDAPEISLQPEPFKRLIKVVKS 3
           EQSQT+ R Y PAGSS +  A PLSIEFD  EISLQP+P KRLIKVV+S
Sbjct: 329 EQSQTSRRKYAPAGSSQDTGA-PLSIEFDTQEISLQPQPVKRLIKVVES 376


>XP_017257323.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like [Daucus carota subsp. sativus]
          Length = 670

 Score =  149 bits (375), Expect = 1e-39
 Identities = 77/109 (70%), Positives = 87/109 (79%)
 Frame = -3

Query: 329 KKLH*MVVQKEFSLQQHKLSIQSAGYSSQSLTSSLPATDHEKQSFCAENTVPLQRPLTQV 150
           KK+  MVVQKE+ L+ HKL IQSAGYS Q LTSSLP+TDHE QSFC ENT+ LQRP+  V
Sbjct: 308 KKMQQMVVQKEYGLEHHKLCIQSAGYSPQILTSSLPSTDHENQSFCTENTIHLQRPVVPV 367

Query: 149 EQSQTAIRNYTPAGSSPEKSAFPLSIEFDAPEISLQPEPFKRLIKVVKS 3
           EQSQT+ R Y PAGSS +  A PLSIEFD  EISLQP+P KRLIKVV+S
Sbjct: 368 EQSQTSRRKYAPAGSSQDTGA-PLSIEFDTQEISLQPQPVKRLIKVVES 415


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