BLASTX nr result

ID: Angelica27_contig00025621 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00025621
         (654 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017237002.1 PREDICTED: protein CASC3-like isoform X2 [Daucus ...   137   8e-34
XP_017237000.1 PREDICTED: protein CASC3-like isoform X1 [Daucus ...   137   8e-34

>XP_017237002.1 PREDICTED: protein CASC3-like isoform X2 [Daucus carota subsp.
           sativus]
          Length = 700

 Score =  137 bits (345), Expect = 8e-34
 Identities = 89/163 (54%), Positives = 94/163 (57%), Gaps = 4/163 (2%)
 Frame = +3

Query: 177 MESVENQELEYESDPEES---LTMMRRREASXXXXXXXXLVGTSGMPIRGVDFRVSDCES 347
           M SVE QELEYESDPEES   LTMMRRREAS        LV  SGMP+R VD RVS+CE 
Sbjct: 1   MASVEKQELEYESDPEESRLSLTMMRRREASDDEDEEKDLVDGSGMPVRRVDSRVSNCEY 60

Query: 348 EDEGAPAEYNDEGFVVQVXXXXXXXXXXXXYV-ERVSVSHVKIVALEVDEVSGINRVXXX 524
           +DEGAPAEYNDE F VQ             YV ERVSVS V +VAL +DEV GINRV   
Sbjct: 61  DDEGAPAEYNDEEFEVQ--GEELDGEIEGEYVEERVSVSDVTVVALGLDEVPGINRVEEG 118

Query: 525 XXXXXXXVYLEGYDQFGAXXXXXXXXXXXXXXXXXXXPFAVPT 653
                  VY EGYDQFG                    PFAVPT
Sbjct: 119 EKENDGGVYFEGYDQFG----DNVVNERVEGEKKENEPFAVPT 157


>XP_017237000.1 PREDICTED: protein CASC3-like isoform X1 [Daucus carota subsp.
           sativus] XP_017237001.1 PREDICTED: protein CASC3-like
           isoform X1 [Daucus carota subsp. sativus]
          Length = 701

 Score =  137 bits (345), Expect = 8e-34
 Identities = 89/163 (54%), Positives = 94/163 (57%), Gaps = 4/163 (2%)
 Frame = +3

Query: 177 MESVENQELEYESDPEES---LTMMRRREASXXXXXXXXLVGTSGMPIRGVDFRVSDCES 347
           M SVE QELEYESDPEES   LTMMRRREAS        LV  SGMP+R VD RVS+CE 
Sbjct: 1   MASVEKQELEYESDPEESRLSLTMMRRREASDDEDEEKDLVDGSGMPVRRVDSRVSNCEY 60

Query: 348 EDEGAPAEYNDEGFVVQVXXXXXXXXXXXXYV-ERVSVSHVKIVALEVDEVSGINRVXXX 524
           +DEGAPAEYNDE F VQ             YV ERVSVS V +VAL +DEV GINRV   
Sbjct: 61  DDEGAPAEYNDEEFEVQ--GEELDGEIEGEYVEERVSVSDVTVVALGLDEVPGINRVEEG 118

Query: 525 XXXXXXXVYLEGYDQFGAXXXXXXXXXXXXXXXXXXXPFAVPT 653
                  VY EGYDQFG                    PFAVPT
Sbjct: 119 EKENDGGVYFEGYDQFG----DNVVNERVEGEKKENEPFAVPT 157


Top