BLASTX nr result
ID: Angelica27_contig00022317
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica27_contig00022317 (771 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value KZM92608.1 hypothetical protein DCAR_020027 [Daucus carota subsp... 433 e-148 XP_017254804.1 PREDICTED: putative pentatricopeptide repeat-cont... 433 e-148 XP_010664915.1 PREDICTED: putative pentatricopeptide repeat-cont... 305 4e-98 XP_019174103.1 PREDICTED: pentatricopeptide repeat-containing pr... 276 2e-86 XP_010671552.1 PREDICTED: pentatricopeptide repeat-containing pr... 263 3e-81 XP_010255177.1 PREDICTED: pentatricopeptide repeat-containing pr... 261 2e-80 KNA15281.1 hypothetical protein SOVF_099680 [Spinacia oleracea] 245 3e-74 XP_006852897.2 PREDICTED: putative pentatricopeptide repeat-cont... 218 1e-64 XP_008777992.1 PREDICTED: putative pentatricopeptide repeat-cont... 219 2e-64 XP_010909359.1 PREDICTED: pentatricopeptide repeat-containing pr... 214 1e-62 XP_020102032.1 pentatricopeptide repeat-containing protein At1g1... 206 5e-60 ERN14364.1 hypothetical protein AMTR_s00033p00222240 [Amborella ... 195 3e-57 XP_009409010.1 PREDICTED: pentatricopeptide repeat-containing pr... 196 1e-55 XP_018684570.1 PREDICTED: pentatricopeptide repeat-containing pr... 169 2e-45 ONK61925.1 uncharacterized protein A4U43_C08F34980 [Asparagus of... 112 6e-26 5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 105 1e-22 5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ... 103 6e-22 5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 103 6e-22 XP_002984987.1 hypothetical protein SELMODRAFT_20977, partial [S... 103 9e-22 5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 103 1e-21 >KZM92608.1 hypothetical protein DCAR_020027 [Daucus carota subsp. sativus] Length = 501 Score = 433 bits (1113), Expect = e-148 Identities = 211/256 (82%), Positives = 226/256 (88%) Frame = -3 Query: 769 RKESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVL 590 R+ESYGALI ALCRENEG LGKEV+RVM +G VDCFSYYVLFRCFCRNGNVDEADWVL Sbjct: 136 RRESYGALIGALCRENEGELGKEVMRVMGGLGIEVDCFSYYVLFRCFCRNGNVDEADWVL 195 Query: 589 RALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVI 410 R LVKR+F++DICVYGNF+Y LCK GKFREAKKLFLRLTKQD VGGYK +DFLKEGRRVI Sbjct: 196 RELVKREFYIDICVYGNFLYGLCKTGKFREAKKLFLRLTKQDGVGGYKNVDFLKEGRRVI 255 Query: 409 FQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVA 230 FQLK EDNVPNILA+ESYFRSLCD+GRLDEAEV+LKKMMNSR VPEICVYGSFIKALF A Sbjct: 256 FQLKCEDNVPNILAYESYFRSLCDIGRLDEAEVLLKKMMNSRIVPEICVYGSFIKALFAA 315 Query: 229 DRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANCSN 50 DRDKDAIRF QVEKKKGLVKVDEIASYVI GLCQ KLDEAVR F+ET + G F N +N Sbjct: 316 DRDKDAIRFLQVEKKKGLVKVDEIASYVIKGLCQKRKLDEAVRIFDET-SVLGEFLNRTN 374 Query: 49 VCNCILNRYWTENRLA 2 +CNCIL YW E R A Sbjct: 375 ICNCILGNYWKEGRSA 390 Score = 62.8 bits (151), Expect = 1e-07 Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 13/219 (5%) Frame = -3 Query: 736 LCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVD 557 LC + G K+V ++ G DC + +++ C N + + + V L +D Sbjct: 45 LCEIKKLGRAKDVFLKLKSEGKLKDCILFSLVYDCLVANSGIHDVEVVWNELCGNDLKID 104 Query: 556 ICVYGNFMYALCKLGKFREAKKLFLRLT------KQDNVGGY-------KKLDFLKEGRR 416 +C +++ +CK E K +F R+ ++++ G + + KE R Sbjct: 105 VC---DYVVYVCKFCGREEIKGIFERVVMGGRVLRRESYGALIGALCRENEGELGKEVMR 161 Query: 415 VIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALF 236 V+ L E + ++ FR C G +DEA+ VL++++ +ICVYG+F+ L Sbjct: 162 VMGGLGIE---VDCFSYYVLFRCFCRNGNVDEADWVLRELVKREFYIDICVYGNFLYGLC 218 Query: 235 VADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGK 119 + ++A + F L K D + Y + + G+ Sbjct: 219 KTGKFREAKKLF-----LRLTKQDGVGGYKNVDFLKEGR 252 >XP_017254804.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Daucus carota subsp. sativus] Length = 546 Score = 433 bits (1113), Expect = e-148 Identities = 211/256 (82%), Positives = 226/256 (88%) Frame = -3 Query: 769 RKESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVL 590 R+ESYGALI ALCRENEG LGKEV+RVM +G VDCFSYYVLFRCFCRNGNVDEADWVL Sbjct: 186 RRESYGALIGALCRENEGELGKEVMRVMGGLGIEVDCFSYYVLFRCFCRNGNVDEADWVL 245 Query: 589 RALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVI 410 R LVKR+F++DICVYGNF+Y LCK GKFREAKKLFLRLTKQD VGGYK +DFLKEGRRVI Sbjct: 246 RELVKREFYIDICVYGNFLYGLCKTGKFREAKKLFLRLTKQDGVGGYKNVDFLKEGRRVI 305 Query: 409 FQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVA 230 FQLK EDNVPNILA+ESYFRSLCD+GRLDEAEV+LKKMMNSR VPEICVYGSFIKALF A Sbjct: 306 FQLKCEDNVPNILAYESYFRSLCDIGRLDEAEVLLKKMMNSRIVPEICVYGSFIKALFAA 365 Query: 229 DRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANCSN 50 DRDKDAIRF QVEKKKGLVKVDEIASYVI GLCQ KLDEAVR F+ET + G F N +N Sbjct: 366 DRDKDAIRFLQVEKKKGLVKVDEIASYVIKGLCQKRKLDEAVRIFDET-SVLGEFLNRTN 424 Query: 49 VCNCILNRYWTENRLA 2 +CNCIL YW E R A Sbjct: 425 ICNCILGNYWKEGRSA 440 Score = 63.9 bits (154), Expect = 5e-08 Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 13/223 (5%) Frame = -3 Query: 748 LISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRK 569 +I LC + G K+V ++ G DC + +++ C N + + + V L Sbjct: 91 VIQYLCEIKKLGRAKDVFLKLKSEGKLKDCILFSLVYDCLVANSGIHDVEVVWNELCGND 150 Query: 568 FHVDICVYGNFMYALCKLGKFREAKKLFLRLT------KQDNVGGY-------KKLDFLK 428 +D+C +++ +CK E K +F R+ ++++ G + + K Sbjct: 151 LKIDVC---DYVVYVCKFCGREEIKGIFERVVMGGRVLRRESYGALIGALCRENEGELGK 207 Query: 427 EGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFI 248 E RV+ L E + ++ FR C G +DEA+ VL++++ +ICVYG+F+ Sbjct: 208 EVMRVMGGLGIE---VDCFSYYVLFRCFCRNGNVDEADWVLRELVKREFYIDICVYGNFL 264 Query: 247 KALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGK 119 L + ++A + F L K D + Y + + G+ Sbjct: 265 YGLCKTGKFREAKKLF-----LRLTKQDGVGGYKNVDFLKEGR 302 >XP_010664915.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Vitis vinifera] Length = 536 Score = 305 bits (782), Expect = 4e-98 Identities = 155/258 (60%), Positives = 193/258 (74%), Gaps = 2/258 (0%) Frame = -3 Query: 769 RKESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVL 590 R++SY LI ALCRENEG L KEV+R M+ GFR D + +VLFRCFCRNGN+DEAD +L Sbjct: 172 RQQSYAGLIGALCRENEGVLAKEVLRQMKSRGFRCDDITSFVLFRCFCRNGNLDEADLIL 231 Query: 589 RALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQD--NVGGYKKLDFLKEGRR 416 R LVKR++H+D+CVYG+F++ LCK GKFREA KLF +L K+D V G + LKEGRR Sbjct: 232 RKLVKRRYHIDVCVYGSFIHGLCKSGKFREAGKLFRKLIKKDCFKVDG---AELLKEGRR 288 Query: 415 VIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALF 236 IFQL E VP ++A+E YFRSLC G+LDEAEV+LKKMM RTVPEICV+GSF+KAL Sbjct: 289 AIFQLNCEGVVPEVMAYEIYFRSLCSAGKLDEAEVLLKKMMKRRTVPEICVHGSFVKALC 348 Query: 235 VADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANC 56 A R+ DA++FF VE+KKGL++VDE+A +VI LC GK+D+A R F+ET A G F N Sbjct: 349 RAGREVDAMKFFYVERKKGLIQVDELAGFVIKELCGIGKVDDAGRIFHETLAN-GGFVNP 407 Query: 55 SNVCNCILNRYWTENRLA 2 + NCIL YW R+A Sbjct: 408 TAASNCILASYWEVGRVA 425 Score = 74.3 bits (181), Expect = 1e-11 Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 36/259 (13%) Frame = -3 Query: 757 YGALISALCRENE----GGL-------------GKEVVRVMRDVGFRVDC-------FSY 650 YG+ I LC+ + G L G E+++ R F+++C +Y Sbjct: 246 YGSFIHGLCKSGKFREAGKLFRKLIKKDCFKVDGAELLKEGRRAIFQLNCEGVVPEVMAY 305 Query: 649 YVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFL---- 482 + FR C G +DEA+ +L+ ++KR+ +ICV+G+F+ ALC+ G+ +A K F Sbjct: 306 EIYFRSLCSAGKLDEAEVLLKKMMKRRTVPEICVHGSFVKALCRAGREVDAMKFFYVERK 365 Query: 481 -RLTKQDNVGGYKKLDFLKEGR-----RVIFQLKSEDNVPNILAFES-YFRSLCDMGRLD 323 L + D + G+ + G+ R+ + + N A + S ++GR+ Sbjct: 366 KGLIQVDELAGFVIKELCGIGKVDDAGRIFHETLANGGFVNPTAASNCILASYWEVGRVA 425 Query: 322 EAEVVLKKMMNSRTV-PEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYV 146 EAE + M P++ Y + + A+ F + ++ + Sbjct: 426 EAEKLFGSMQTGGFGWPDLLTYTTMVSGYCNQGNVSKAVSLFGEIAHSNIPVNGKLYEII 485 Query: 145 IMGLCQNGKLDEAVRFFNE 89 + GLC G+L EA + NE Sbjct: 486 VRGLCDGGRLKEAHMYLNE 504 >XP_019174103.1 PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like [Ipomoea nil] Length = 542 Score = 276 bits (705), Expect = 2e-86 Identities = 135/254 (53%), Positives = 177/254 (69%) Frame = -3 Query: 766 KESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLR 587 ++S ALI ALCR NEG L KE+ M D G VD SY+V+F+CFCRNG+VDEAD +LR Sbjct: 186 RQSLVALIGALCRVNEGSLAKELAGEMLDRGIAVDDLSYFVIFQCFCRNGDVDEADLILR 245 Query: 586 ALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIF 407 L K KFH D+C+YG+F++ALCK GK REA KLF RL K+D+ KK LKEGRR IF Sbjct: 246 KLWKTKFHFDVCIYGSFLHALCKSGKLREANKLFCRLIKRDSSEVSKKAAILKEGRRAIF 305 Query: 406 QLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVAD 227 Q+ E +P I+A+E+YFRSLC GR++EA+ +LK M R EIC+YGSFI ALF A Sbjct: 306 QMSWEGAIPEIVAYEAYFRSLCSAGRINEAQELLKDMKKKRNSLEICIYGSFINALFRAG 365 Query: 226 RDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANCSNV 47 R +DA++FF VE KG+++++++A +VI GLC +G+LDEA+ FN A C+ Sbjct: 366 RAEDALKFFDVESYKGVIRMEDMARFVITGLCYDGRLDEALEIFNNGIA-------CART 418 Query: 46 CNCILNRYWTENRL 5 NCIL+ YW R+ Sbjct: 419 LNCILDGYWRARRV 432 Score = 60.1 bits (144), Expect = 9e-07 Identities = 57/262 (21%), Positives = 104/262 (39%), Gaps = 35/262 (13%) Frame = -3 Query: 709 GKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMY 530 G+ + M G + +Y FR C G ++EA +L+ + K++ ++IC+YG+F+ Sbjct: 300 GRRAIFQMSWEGAIPEIVAYEAYFRSLCSAGRINEAQELLKDMKKKRNSLEICIYGSFIN 359 Query: 529 ALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFR 350 AL + G+ +A K F +V YK + +++ R + Sbjct: 360 ALFRAGRAEDALKFF-------DVESYKGVIRMEDMARFVIT------------------ 394 Query: 349 SLCDMGRLDEA--------------EVVLKKMMNSRTVPE-----------------ICV 263 LC GRLDEA +L +R V E + Sbjct: 395 GLCYDGRLDEALEIFNNGIACARTLNCILDGYWRARRVVEAERLFQRLQGGGFGYYNVST 454 Query: 262 YGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETA 83 YG+ I A+R + + + + +I GLC G++++A+++FN Sbjct: 455 YGTMINGYCNEGNVSKAVRLLDEMLSRKMSVNQTLYAMIIGGLCACGRVEQALQYFNAMV 514 Query: 82 ----AAFGRFANCSNVCNCILN 29 A G+ C ++ + +LN Sbjct: 515 ENGHAVSGK--RCESLLHLLLN 534 >XP_010671552.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Beta vulgaris subsp. vulgaris] KMT20573.1 hypothetical protein BVRB_1g005550 [Beta vulgaris subsp. vulgaris] Length = 551 Score = 263 bits (671), Expect = 3e-81 Identities = 129/253 (50%), Positives = 176/253 (69%) Frame = -3 Query: 766 KESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLR 587 ++SY ALI LCR +EG + K VV M GFRVD +Y V+F+CFCRNG++D ADWVLR Sbjct: 189 RQSYVALIGVLCRYDEGLMAKSVVHEMYYRGFRVDDVTYIVVFQCFCRNGDLDGADWVLR 248 Query: 586 ALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIF 407 L+ F VD+C+YG+FMY LC++GKFREA KLF +L K+D G K LKEGRR IF Sbjct: 249 KLINGGFDVDVCIYGSFMYGLCEVGKFREASKLFDKLIKRDCFSG-SKAGLLKEGRRAIF 307 Query: 406 QLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVAD 227 QL + +P ++ +E Y RSLC +G+LD+AE++LKK+M ++ +ICVYGSFIKALF Sbjct: 308 QLSYKGVIPEMMVYEMYVRSLCAVGKLDDAELLLKKIMKKSSMAQICVYGSFIKALFRVG 367 Query: 226 RDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANCSNV 47 R++DA++FF VE KKG V DE+A +VI+ LC+ G +D+A++ F+E F + + Sbjct: 368 REEDALKFFNVECKKGFVCSDELARFVIVQLCEKGGVDDAMKIFDEFTGK-STFISTVAL 426 Query: 46 CNCILNRYWTENR 8 CNC+L W R Sbjct: 427 CNCLLGSLWDAGR 439 Score = 62.8 bits (151), Expect = 1e-07 Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 34/249 (13%) Frame = -3 Query: 751 ALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKR 572 A+ LC+ + K V ++D F++ ++F C ++GN+D+ + V + Sbjct: 93 AIFEGLCKLKKLNRAKNVFLHLKDNLKVYPYFAFSLVFDCLVKDGNLDDVE-VQWNDISN 151 Query: 571 KFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFL-------KEG--- 422 + +++ +++ +CK G F E KK++ R+ V G + L EG Sbjct: 152 GYEINL---SDYVIYVCKCGDFDEIKKVYERVLMGSRVLGRQSYVALIGVLCRYDEGLMA 208 Query: 421 RRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKA 242 + V+ ++ + + + F+ C G LD A+ VL+K++N ++C+YGSF+ Sbjct: 209 KSVVHEMYYRGFRVDDVTYIVVFQCFCRNGDLDGADWVLRKLINGGFDVDVCIYGSFMYG 268 Query: 241 LFVADRDKDAIRFFQ--------VEKKKGLVK--------------VDEIASY--VIMGL 134 L + ++A + F K GL+K + E+ Y + L Sbjct: 269 LCEVGKFREASKLFDKLIKRDCFSGSKAGLLKEGRRAIFQLSYKGVIPEMMVYEMYVRSL 328 Query: 133 CQNGKLDEA 107 C GKLD+A Sbjct: 329 CAVGKLDDA 337 >XP_010255177.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Nelumbo nucifera] Length = 564 Score = 261 bits (666), Expect = 2e-80 Identities = 133/255 (52%), Positives = 176/255 (69%) Frame = -3 Query: 769 RKESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVL 590 R +SY ALI ALCRE++G L K V++ M+ G + D +Y ++F+CFCRNG + EAD +L Sbjct: 200 RFQSYIALIGALCRESKGHLAKAVLQEMKRKGLKPDNLTYLIMFQCFCRNGELSEADSIL 259 Query: 589 RALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVI 410 R LV+RK+ +DIC+YG+F+Y LCK K+REA KLF RL K D+ G LK+GRR I Sbjct: 260 RKLVRRKYDMDICIYGSFIYGLCKSSKYREADKLFKRLIKVDD-SGVSGNGSLKQGRRAI 318 Query: 409 FQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVA 230 FQL + VP I+A+E Y RSLCDMG+LDEAE +LK+MM RTVPE CVY SFIKALF A Sbjct: 319 FQLNCKGAVPEIMAYEYYCRSLCDMGKLDEAETLLKEMMRKRTVPEGCVYRSFIKALFQA 378 Query: 229 DRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANCSN 50 RD+DAIRFF KKKG V+ +EIA +++MGLC+ ++D+A F + G + Sbjct: 379 GRDEDAIRFFNAMKKKGFVRQEEIAGFIVMGLCEMDRVDDAWMIFYDIFVK-GSVLVERS 437 Query: 49 VCNCILNRYWTENRL 5 + NC++ Y RL Sbjct: 438 ISNCLIGSYLKVRRL 452 >KNA15281.1 hypothetical protein SOVF_099680 [Spinacia oleracea] Length = 572 Score = 245 bits (625), Expect = 3e-74 Identities = 121/269 (44%), Positives = 173/269 (64%), Gaps = 15/269 (5%) Frame = -3 Query: 766 KESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLR 587 ++SY ALI LCR NEG + K ++ M GF +D +Y V+F+C CRNG+++ ADW LR Sbjct: 195 RQSYVALIGVLCRYNEGSMAKLLLHEMYCRGFNIDDVTYIVIFQCLCRNGDLNAADWELR 254 Query: 586 ALVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIF 407 ++ F VD+C+Y +FM+ LCK GKF+EAKKLF +L K+D G K +FLK+GRRV+F Sbjct: 255 KMITAGFDVDMCIYESFMHGLCKNGKFKEAKKLFDKLMKRDCFTGSSKPEFLKKGRRVVF 314 Query: 406 QLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVAD 227 QL P I+ +E Y RSLC +G+LD+AEV+LKKMM ++ ++CVYGSFI ALF Sbjct: 315 QLNYNGEFPEIMVYEMYIRSLCVVGKLDDAEVLLKKMMKKSSMAQVCVYGSFINALFRNG 374 Query: 226 RDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFN-------ETAAAFGR 68 R++DA++FF VE KKGLV +++A Y+ C+ ++D+A +FFN + GR Sbjct: 375 REEDALKFFHVECKKGLVCSNQLARYMFFQYCEKDRVDDATKFFNIRTVSSCKDGCGPGR 434 Query: 67 FANCSN--------VCNCILNRYWTENRL 5 + N CNC+L W+ R+ Sbjct: 435 VGSGQNRARINPVADCNCLLGSLWSVGRI 463 Score = 60.1 bits (144), Expect = 9e-07 Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 7/214 (3%) Frame = -3 Query: 709 GKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMY 530 G+ VV + G + Y + R C G +D+A+ +L+ ++K+ +CVYG+F+ Sbjct: 309 GRRVVFQLNYNGEFPEIMVYEMYIRSLCVVGKLDDAEVLLKKMMKKSSMAQVCVYGSFIN 368 Query: 529 ALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAF----- 365 AL + G+ +A K F K+ V + R + FQ +D V + F Sbjct: 369 ALFRNGREEDALKFFHVECKKGLVCSNQL------ARYMFFQYCEKDRVDDATKFFNIRT 422 Query: 364 ESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQVEKK 185 S + C GR+ + N + + + +L+ R +A ++F++ K Sbjct: 423 VSSCKDGCGPGRVGSGQ-------NRARINPVADCNCLLGSLWSVGRILEAEKYFEL-MK 474 Query: 184 KGLVKVDEIASYVIM--GLCQNGKLDEAVRFFNE 89 G + +A+Y +M G C NG + +A+ F E Sbjct: 475 NGELAPPNLATYRVMVCGFCNNGDIRKALDIFEE 508 >XP_006852897.2 PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Amborella trichopoda] Length = 514 Score = 218 bits (556), Expect = 1e-64 Identities = 115/253 (45%), Positives = 163/253 (64%) Frame = -3 Query: 763 ESYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRA 584 +SY ALI LC++NE L EV+R M GF+ D ++ ++F+CFCR G V EAD +LR+ Sbjct: 141 QSYLALIGGLCQKNEAFLAGEVLRAMEQNGFQPDYITHLLMFQCFCRLGLVYEADIILRS 200 Query: 583 LVKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQ 404 ++ + + +DICVYG+F++ LCK GK REA KLF +L ++ ++ +K GRR IFQ Sbjct: 201 MIMKNYTLDICVYGSFIHGLCKSGKLREADKLFKKLINKETT---LRVPNVKPGRRAIFQ 257 Query: 403 LKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADR 224 L +P I+A+E+Y RSLC++G+L+EA VVLK +M+ R VPE CVYGSFI+ L A R Sbjct: 258 LNVSGAIPEIMAYEAYCRSLCNVGQLEEAGVVLKALMSKRNVPETCVYGSFIRGLCRAGR 317 Query: 223 DKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANCSNVC 44 +A+ FF +KKG V EI VI LC+ K +EA+ F+E + G F ++V Sbjct: 318 VSEAMEFFNTMRKKGWVSNVEITLCVIKALCEIAKTNEALGLFDELSK--GGFVPTTSVI 375 Query: 43 NCILNRYWTENRL 5 N L YW E +L Sbjct: 376 NDFLTGYWRERQL 388 Score = 66.6 bits (161), Expect = 6e-09 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 10/194 (5%) Frame = -3 Query: 748 LISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRK 569 +I LC N+ K+V+ + F Y ++ C ++G + + + ++ Sbjct: 42 VIHRLCEINQLVRAKKVLSQLTRNPKISGFFLYSIVIHCIVKDGRIKDVECTFEEIIGNG 101 Query: 568 FHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEG----------R 419 +I V FM LCKLGK REAK + R+ ++ + Y+ L G Sbjct: 102 SLANINV-STFMNYLCKLGKAREAKNVCQRVLMENVILEYQSYLALIGGLCQKNEAFLAG 160 Query: 418 RVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKAL 239 V+ ++ P+ + F+ C +G + EA+++L+ M+ +ICVYGSFI L Sbjct: 161 EVLRAMEQNGFQPDYITHLLMFQCFCRLGLVYEADIILRSMIMKNYTLDICVYGSFIHGL 220 Query: 238 FVADRDKDAIRFFQ 197 + + ++A + F+ Sbjct: 221 CKSGKLREADKLFK 234 >XP_008777992.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Phoenix dactylifera] Length = 541 Score = 219 bits (557), Expect = 2e-64 Identities = 122/258 (47%), Positives = 159/258 (61%), Gaps = 3/258 (1%) Frame = -3 Query: 769 RKESYGALISALCRENEG--GLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADW 596 R+E Y ALI A+C N GL + V+R M + GF D +Y+ LF+ FCR GNV EAD Sbjct: 169 RREGYVALIGAMCEGNNPNPGLARNVLREMEEKGFEADVLTYFALFQSFCRTGNVLEADS 228 Query: 595 VLRALVKRKFH-VDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGR 419 VLR LV R H +D+ VYGNF Y+LCK G+ REA+KLF +L K+D + LK GR Sbjct: 229 VLRTLVDRWDHELDVSVYGNFFYSLCKSGRLREARKLFDKLAKKDRGLEVNPVPCLKPGR 288 Query: 418 RVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKAL 239 RVIFQL + V ++AFE+Y RSLC GR+++AE +LK+ VPEICV SFI+AL Sbjct: 289 RVIFQLSPSNKVTKVMAFEAYVRSLCSAGRVEDAERMLKEAARKSMVPEICVCRSFIEAL 348 Query: 238 FVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFAN 59 F A R DAI FF+ EK++ + +A+ VI GLC+ G++DE R E F Sbjct: 349 FRAGRVDDAIGFFEAEKRRRHAEAGAMAAAVIEGLCEMGRVDEGCRLLCEMVDE--GFVP 406 Query: 58 CSNVCNCILNRYWTENRL 5 + V N IL YW E R+ Sbjct: 407 TAKVWNWILESYWEEGRV 424 >XP_010909359.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63400-like [Elaeis guineensis] Length = 539 Score = 214 bits (545), Expect = 1e-62 Identities = 121/259 (46%), Positives = 160/259 (61%), Gaps = 3/259 (1%) Frame = -3 Query: 769 RKESYGALISALCRENEGG--LGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADW 596 R+E Y ALI A+C N L + V+R M + GF D +Y+ LFR FCR GNV EAD Sbjct: 169 RREGYVALIGAICEGNNPNPRLARNVLREMEEKGFEADELTYFSLFRSFCRTGNVLEADS 228 Query: 595 VLRALVKRKFH-VDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGR 419 VLR+LV R H +DI VYGNF Y LCK G++REA+KLF +L+K+D LK GR Sbjct: 229 VLRSLVDRWDHELDISVYGNFFYGLCKSGRWREARKLFDKLSKKDGRLEVNPSPRLKPGR 288 Query: 418 RVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKAL 239 R+IFQ + V ++AFE+Y RSLC GR+++AE +LK+ V EICVY S+I+AL Sbjct: 289 RIIFQFSPSNKVTKVMAFEAYVRSLCSAGRVEDAERMLKEAARKNAVLEICVYRSYIEAL 348 Query: 238 FVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFAN 59 F A R DAI FF+ EK+K ++V +A VI GLC+ G++DE + E F Sbjct: 349 FRAGRVDDAIGFFEAEKRKRHIEVGGMAVAVIEGLCKRGRVDEGCQLLCEILDE--GFVP 406 Query: 58 CSNVCNCILNRYWTENRLA 2 + V N I+ YW E R+A Sbjct: 407 TAKVWNWIVESYWEEGRVA 425 >XP_020102032.1 pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like [Ananas comosus] Length = 478 Score = 206 bits (523), Expect = 5e-60 Identities = 118/257 (45%), Positives = 161/257 (62%), Gaps = 5/257 (1%) Frame = -3 Query: 760 SYGALISALCR-ENEGG-LGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLR 587 +Y ALI ALC+ EN LG+ V+R M + GF D +Y LFR FCR GN EAD +LR Sbjct: 117 AYSALIGALCKGENPNPVLGRHVLREMEEKGFEADELTYIALFRSFCRIGNPLEADSILR 176 Query: 586 ALVKRK-FHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDN--VGGYKKLDFLKEGRR 416 LV+RK + D+ +YG+F+Y LCK GK REA+KLF +++K+D + + LK GRR Sbjct: 177 ILVERKKYKADVLIYGDFLYGLCKSGKLREARKLFDKMSKKDRSFTANTEVVPVLKPGRR 236 Query: 415 VIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALF 236 VIFQL S V +AFE+YFR+LC GR++EAE +LK + TVP++CVY SF++ALF Sbjct: 237 VIFQLGSPHPVSEKMAFEAYFRALCGTGRVEEAERLLKDRVMQNTVPDVCVYASFVEALF 296 Query: 235 VADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANC 56 A R +DA+ FF+ K K + IA +IMGLC G+ E ++ E GRF Sbjct: 297 DAGRVEDAMNFFEAHKNKRGIDGKGIAVALIMGLCNVGRAGEGLQLLYEIVD--GRFFPT 354 Query: 55 SNVCNCILNRYWTENRL 5 + V N I+ R+ E R+ Sbjct: 355 ARVWNRIVERFCEEGRV 371 >ERN14364.1 hypothetical protein AMTR_s00033p00222240 [Amborella trichopoda] Length = 349 Score = 195 bits (495), Expect = 3e-57 Identities = 102/228 (44%), Positives = 146/228 (64%) Frame = -3 Query: 688 MRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMYALCKLGK 509 M GF+ D ++ ++F+CFCR G V EAD +LR+++ + + +DICVYG+F++ LCK GK Sbjct: 1 MEQNGFQPDYITHLLMFQCFCRLGLVYEADIILRSMIMKNYTLDICVYGSFIHGLCKSGK 60 Query: 508 FREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGR 329 REA KLF +L ++ ++ +K GRR IFQL +P I+A+E+Y RSLC++G+ Sbjct: 61 LREADKLFKKLINKETT---LRVPNVKPGRRAIFQLNVSGAIPEIMAYEAYCRSLCNVGQ 117 Query: 328 LDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASY 149 L+EA VVLK +M+ R VPE CVYGSFI+ L A R +A+ FF +KKG V EI Sbjct: 118 LEEAGVVLKALMSKRNVPETCVYGSFIRGLCRAGRVSEAMEFFNTMRKKGWVSNVEITLC 177 Query: 148 VIMGLCQNGKLDEAVRFFNETAAAFGRFANCSNVCNCILNRYWTENRL 5 VI LC+ K +EA+ F+E + G F ++V N L YW E +L Sbjct: 178 VIKALCEIAKTNEALGLFDELSK--GGFVPTTSVINDFLTGYWRERQL 223 Score = 69.7 bits (169), Expect = 4e-10 Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 1/208 (0%) Frame = -3 Query: 709 GKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMY 530 G+ + + G + +Y R C G ++EA VL+AL+ ++ + CVYG+F+ Sbjct: 86 GRRAIFQLNVSGAIPEIMAYEAYCRSLCNVGQLEEAGVVLKALMSKRNVPETCVYGSFIR 145 Query: 529 ALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFR 350 LC+ G+ EA + F + K+ G+ V N+ + Sbjct: 146 GLCRAGRVSEAMEFFNTMRKK----GW---------------------VSNVEITLCVIK 180 Query: 349 SLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVK 170 +LC++ + +EA + ++ VP V F+ + + DA+R F+ K Sbjct: 181 ALCEIAKTNEALGLFDELSKGGFVPTTSVINDFLTGYWRERQLNDAMRLFERIMDGSCGK 240 Query: 169 VD-EIASYVIMGLCQNGKLDEAVRFFNE 89 D S ++ GLC+NG L +A+ F E Sbjct: 241 PDASTYSIMVTGLCENGHLSKALCIFQE 268 >XP_009409010.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62720-like isoform X1 [Musa acuminata subsp. malaccensis] XP_018684569.1 PREDICTED: pentatricopeptide repeat-containing protein At1g62720-like isoform X1 [Musa acuminata subsp. malaccensis] Length = 580 Score = 196 bits (499), Expect = 1e-55 Identities = 112/257 (43%), Positives = 152/257 (59%), Gaps = 3/257 (1%) Frame = -3 Query: 766 KESYGALISALCREN--EGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWV 593 ++ Y ALI A C+ + L + V+R M + GF D +Y+ +FR FCR GNV EAD V Sbjct: 204 RQRYMALIGAFCQSSCPNPSLARAVLREMEEKGFEADELTYFAIFRSFCRVGNVFEADLV 263 Query: 592 LRALVKR-KFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRR 416 LR++V R +DI +YGNF+Y LCK GK REA+KLF +L K+ + LK GRR Sbjct: 264 LRSMVDRWNCKLDILIYGNFLYGLCKSGKLREARKLFDKLLKKGQNIKDSLIPVLKPGRR 323 Query: 415 VIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALF 236 VIFQL S + +AF +YF+SLC GR++EAE++LK+ E CVY SFI+AL Sbjct: 324 VIFQLSSTKLISETVAFGAYFQSLCKTGRVEEAEMLLKEATEKNIPVETCVYVSFIEALC 383 Query: 235 VADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANC 56 A R +DA+ +EKKK V V +I VI GLC+ G++D+ R E + Sbjct: 384 RAGRAEDAVELLDLEKKKQSVSVGDITVAVIAGLCKLGQVDDGYRLLLEMVNE--GVSPT 441 Query: 55 SNVCNCILNRYWTENRL 5 + VCN IL YW R+ Sbjct: 442 AQVCNWILKSYWEAGRM 458 Score = 58.2 bits (139), Expect = 4e-06 Identities = 41/171 (23%), Positives = 80/171 (46%) Frame = -3 Query: 709 GKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMY 530 G+ V+ + + ++ F+ C+ G V+EA+ +L+ ++ V+ CVY +F+ Sbjct: 321 GRRVIFQLSSTKLISETVAFGAYFQSLCKTGRVEEAEMLLKEATEKNIPVETCVYVSFIE 380 Query: 529 ALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFR 350 ALC+ G+ +A +L LD K+ + V +V +I + Sbjct: 381 ALCRAGRAEDAVEL---------------LDLEKKKQSV--------SVGDITV--AVIA 415 Query: 349 SLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQ 197 LC +G++D+ +L +M+N P V +K+ + A R ++AI F+ Sbjct: 416 GLCKLGQVDDGYRLLLEMVNEGVSPTAQVCNWILKSYWEAGRMEEAIGLFE 466 >XP_018684570.1 PREDICTED: pentatricopeptide repeat-containing protein At1g12775, mitochondrial-like isoform X2 [Musa acuminata subsp. malaccensis] Length = 536 Score = 169 bits (427), Expect = 2e-45 Identities = 104/248 (41%), Positives = 140/248 (56%), Gaps = 1/248 (0%) Frame = -3 Query: 745 ISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKR-K 569 + LCR E+ +V R RV + + + FCR GNV EAD VLR++V R Sbjct: 175 VIGLCRRRVDA--SEIEQVYR----RVSRSRWSLSRQSFCRVGNVFEADLVLRSMVDRWN 228 Query: 568 FHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSED 389 +DI +YGNF+Y LCK GK REA+KLF +L K+ + LK GRRVIFQL S Sbjct: 229 CKLDILIYGNFLYGLCKSGKLREARKLFDKLLKKGQNIKDSLIPVLKPGRRVIFQLSSTK 288 Query: 388 NVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAI 209 + +AF +YF+SLC GR++EAE++LK+ E CVY SFI+AL A R +DA+ Sbjct: 289 LISETVAFGAYFQSLCKTGRVEEAEMLLKEATEKNIPVETCVYVSFIEALCRAGRAEDAV 348 Query: 208 RFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAAFGRFANCSNVCNCILN 29 +EKKK V V +I VI GLC+ G++D+ R E + + VCN IL Sbjct: 349 ELLDLEKKKQSVSVGDITVAVIAGLCKLGQVDDGYRLLLEMVNE--GVSPTAQVCNWILK 406 Query: 28 RYWTENRL 5 YW R+ Sbjct: 407 SYWEAGRM 414 Score = 58.2 bits (139), Expect = 4e-06 Identities = 41/171 (23%), Positives = 80/171 (46%) Frame = -3 Query: 709 GKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMY 530 G+ V+ + + ++ F+ C+ G V+EA+ +L+ ++ V+ CVY +F+ Sbjct: 277 GRRVIFQLSSTKLISETVAFGAYFQSLCKTGRVEEAEMLLKEATEKNIPVETCVYVSFIE 336 Query: 529 ALCKLGKFREAKKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFR 350 ALC+ G+ +A +L LD K+ + V +V +I + Sbjct: 337 ALCRAGRAEDAVEL---------------LDLEKKKQSV--------SVGDITV--AVIA 371 Query: 349 SLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQ 197 LC +G++D+ +L +M+N P V +K+ + A R ++AI F+ Sbjct: 372 GLCKLGQVDDGYRLLLEMVNEGVSPTAQVCNWILKSYWEAGRMEEAIGLFE 422 >ONK61925.1 uncharacterized protein A4U43_C08F34980 [Asparagus officinalis] Length = 284 Score = 112 bits (279), Expect = 6e-26 Identities = 63/153 (41%), Positives = 87/153 (56%) Frame = -3 Query: 466 DNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNS 287 D K D LK RRVIFQL V +AF++YFRSLC +G+++EAE K+++ Sbjct: 7 DRQAAEKPSDLLKARRRVIFQLAYPGVVREEIAFKAYFRSLCSLGKVEEAE----KLLSV 62 Query: 286 RTVPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEA 107 + CVY S++KALF A R DA+RFF ++ K E+ S +I GLC+NGK+D+ Sbjct: 63 TKSKDTCVYNSYVKALFRAGRIDDALRFFGSKRNK------ELVSSIIFGLCENGKVDDG 116 Query: 106 VRFFNETAAAFGRFANCSNVCNCILNRYWTENR 8 R +ET F + V NCI+ YW R Sbjct: 117 HRLLDETITE--GFVPTARVLNCIIKSYWENGR 147 >5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8a2 In Complex With Its Target Rna U8a2 Length = 460 Score = 105 bits (263), Expect = 1e-22 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 182 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 183 VEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKL 242 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + PN++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 243 DEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 303 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356 Score = 102 bits (255), Expect = 2e-21 Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 10/234 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 172 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P + Y + Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTL 232 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG+ + +I GLC+ GKLDEA++ F E Sbjct: 233 IDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEE 286 Score = 102 bits (253), Expect = 3e-21 Identities = 64/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 158 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEM 217 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ ++ Y + LCK GK EA KLF + T + G K L Sbjct: 218 VEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKL 277 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 337 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 338 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391 Score = 97.8 bits (242), Expect = 1e-19 Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 10/234 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y ++ AL R E+ +R G +Y L C+ G +DEA + + Sbjct: 18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 78 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTL 197 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG+ S +I GLC+ GKLDEA++ F E Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEE 251 Score = 89.0 bits (219), Expect = 1e-16 Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 11/237 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + + +Y L C+ G +DEA + + Sbjct: 193 TYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEM 252 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ ++ Y + LCK GK EA KLF + T + G K L Sbjct: 253 VEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 372 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNETA 83 I L A + +A++ F+ +KG +K DE+ V+ C+ + +EA F +E + Sbjct: 373 IDGLCKAGKLDEALKLFEEMVEKG-IKPDELTYRRVVESYCRAKRFEEARGFLSEVS 428 >5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8c2 In Complex With Its Target Rna U8c2 Length = 460 Score = 103 bits (258), Expect = 6e-22 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 182 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 183 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKL 242 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 243 DEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 303 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356 Score = 101 bits (252), Expect = 4e-21 Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 158 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 217 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ + Y + LCK GK EA KLF + T + G K L Sbjct: 218 VEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKL 277 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 337 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 338 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391 Score = 97.1 bits (240), Expect = 2e-19 Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 10/234 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y ++ AL R E+ +R G +Y L C+ G +DEA + + Sbjct: 18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 78 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 197 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG+ + +I GLC+ GKLDEA++ F E Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEE 251 Score = 88.2 bits (217), Expect = 2e-16 Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 11/237 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + +Y L C+ G +DEA + + Sbjct: 193 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEM 252 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ + Y + LCK GK EA KLF + T + G K L Sbjct: 253 VEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 372 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNETA 83 I L A + +A++ F+ +KG +K DE+ V+ C+ + +EA F +E + Sbjct: 373 IDGLCKAGKLDEALKLFEEMVEKG-IKPDELTYRRVVESYCRAKRFEEARGFLSEVS 428 Score = 84.3 bits (207), Expect = 5e-15 Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 11/207 (5%) Frame = -3 Query: 676 GFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMYALCKLGKFREA 497 G R+D +Y + R G + A + L ++ + Y + LCK GK EA Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70 Query: 496 KKLFLRL----------TKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRS 347 KLF + T + G K L E ++ ++ + P+++ + + Sbjct: 71 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 130 Query: 346 LCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKV 167 LC G+LDEA + ++M+ P++ Y + I L A + +A++ F+ +KG +K Sbjct: 131 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKP 189 Query: 166 DEIA-SYVIMGLCQNGKLDEAVRFFNE 89 D + + +I GLC+ GKLDEA++ F E Sbjct: 190 DVVTYNTLIDGLCKAGKLDEALKLFEE 216 >5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U10 In Complex With Its Target Rna U10 Length = 460 Score = 103 bits (258), Expect = 6e-22 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 172 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 232 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 233 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 286 Score = 103 bits (258), Expect = 6e-22 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 88 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 147 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 148 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 207 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 208 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 267 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 268 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 321 Score = 103 bits (258), Expect = 6e-22 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 182 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 183 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 242 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 243 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 303 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356 Score = 103 bits (258), Expect = 6e-22 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 158 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 217 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 218 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 277 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 337 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 338 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391 Score = 97.1 bits (240), Expect = 2e-19 Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y ++ AL R E+ +R G +Y L C+ G +DEA + + Sbjct: 18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 78 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 197 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 251 Score = 92.8 bits (229), Expect = 6e-18 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 11/237 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 193 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 252 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 253 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 372 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNETA 83 I L A + +A++ F+ +KG +K DE+ V+ C+ + +EA F +E + Sbjct: 373 IDGLCKAGKLDEALKLFEEMVEKG-IKPDELTYRRVVESYCRAKRFEEARGFLSEVS 428 Score = 76.6 bits (187), Expect = 2e-12 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 1/197 (0%) Frame = -3 Query: 676 GFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMYALCKLGKFREA 497 G R+D +Y + R G + A + L ++ + Y + LCK GK EA Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70 Query: 496 KKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEA 317 KLF + ++ G K P+++ + + LC G+LDEA Sbjct: 71 LKLFEEMVEK----GIK---------------------PDVVTYNTLIDGLCKAGKLDEA 105 Query: 316 EVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIM 140 + ++M+ P++ Y + I L A + +A++ F+ +KG +K D + + +I Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLID 164 Query: 139 GLCQNGKLDEAVRFFNE 89 GLC+ GKLDEA++ F E Sbjct: 165 GLCKAGKLDEALKLFEE 181 >XP_002984987.1 hypothetical protein SELMODRAFT_20977, partial [Selaginella moellendorffii] EFJ13862.1 hypothetical protein SELMODRAFT_20977, partial [Selaginella moellendorffii] Length = 471 Score = 103 bits (257), Expect = 9e-22 Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y ALI LC+ + KEV+ M+ G D F+Y L C+ ++EA+ +LR + Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDN----------VGGYKKLDFL 431 D+ VY + ++A CK GK EA+K + KQ + G KL + Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283 Query: 430 KEGRRVIFQL-KSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGS 254 E + ++ Q+ +S D +P+++ + + LC L EA+ +L +M + P++ Y + Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 343 Query: 253 FIKALFVADRDKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNE 89 I L R ++A Q K+ G + +I GLC+ K+DEA R E Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 398 Score = 97.4 bits (241), Expect = 1e-19 Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 11/239 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y L+ ALC+ + G ++VV+ M + GF + ++ L FC+ GNVD+A +L + Sbjct: 94 TYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIM 153 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V + ++ Y + LCK KF EAK++ + T + G K D + Sbjct: 154 VAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKI 213 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 +E +++ ++ P+++ + S + C G+L EA+ L++M R P++ Y + Sbjct: 214 EEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTV 273 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNETAAA 77 I L + +A ++ G V D + S VI GLC++ L EA + + A Sbjct: 274 IDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 332 Score = 82.8 bits (203), Expect = 2e-14 Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 12/230 (5%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y ALI+A R + +++ MR+ G + +Y VL C+ V A V++ + Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLF-------LR---LTKQDNVGGYKKLDFL 431 ++ F ++ + + + CK G +A+KL +R +T + G K Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E + V+ ++K+ P+ + + LC +++EAE +L++M S P++ VY S Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIASY--VIMGLCQNGKLDEA 107 I A + + +A + Q +K+ K ++ +Y VI GLC+ GK+ EA Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQR--KSPDVVTYNTVIDGLCKLGKIAEA 286 Score = 77.4 bits (189), Expect = 1e-12 Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 48/272 (17%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y ALI LC+ ++ ++++R M G D Y + FC++G + EA L+ + Sbjct: 199 TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 258 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDNV-----------GGYKKLDF 434 K++ D+ Y + LCKLGK EA+ + ++ + +V G K D Sbjct: 259 RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDM 318 Query: 433 LKEGRRVIFQL-----------------------------------KSEDNVPNILAFES 359 L E ++++ ++ K PN++ + + Sbjct: 319 LVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTT 378 Query: 358 YFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQVEKKKG 179 LC ++DEAE V+++M N+ P + Y + + L V+ R K+A + Q K Sbjct: 379 LISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGR 438 Query: 178 LVKVDEIASY--VIMGLCQNGKLDEAVRFFNE 89 + A+Y ++ L + + EA + + Sbjct: 439 AECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 470 Score = 60.5 bits (145), Expect = 6e-07 Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 10/229 (4%) Frame = -3 Query: 733 CRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDI 554 C + E++ M+ GF D F++ + G++D A LR++ ++ Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57 Query: 553 CVYGNFMYALCKLGKFREAKKLFLRLTKQ---DNVGGYK-------KLDFLKEGRRVIFQ 404 Y + A + K EA KL + ++ N+ Y KL + + V+ + Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117 Query: 403 LKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSFIKALFVADR 224 + PN++ F S C G +D+A +L M+ P + Y + I L + + Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177 Query: 223 DKDAIRFFQVEKKKGLVKVDEIASYVIMGLCQNGKLDEAVRFFNETAAA 77 +A + K G+ S +I GLC+ K++EA + A + Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 226 >5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8g2 In Complex With Its Target Rna U8g2 Length = 460 Score = 103 bits (256), Expect = 1e-21 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 158 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEM 217 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 218 VEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 277 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 278 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 337 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 338 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 391 Score = 102 bits (255), Expect = 2e-21 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 53 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 112 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 113 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 172 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 173 DEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTL 232 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 233 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 286 Score = 102 bits (255), Expect = 2e-21 Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 123 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 182 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRLTKQDN----------VGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + ++ + G K L Sbjct: 183 VEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKL 242 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 243 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 302 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 303 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEE 356 Score = 96.3 bits (238), Expect = 3e-19 Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 11/235 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y ++ AL R E+ +R G +Y L C+ G +DEA + + Sbjct: 18 AYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEM 77 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 78 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 137 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 138 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTL 197 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNE 89 I L A + +A++ F+ +KG +K D + + +I GLC+ GKLDEA++ F E Sbjct: 198 IDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYTTLIDGLCKAGKLDEALKLFEE 251 Score = 92.0 bits (227), Expect = 1e-17 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 11/237 (4%) Frame = -3 Query: 760 SYGALISALCRENEGGLGKEVVRVMRDVGFRVDCFSYYVLFRCFCRNGNVDEADWVLRAL 581 +Y LI LC+ + ++ M + G + D +Y L C+ G +DEA + + Sbjct: 193 TYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEM 252 Query: 580 VKRKFHVDICVYGNFMYALCKLGKFREAKKLFLRL----------TKQDNVGGYKKLDFL 431 V++ D+ Y + LCK GK EA KLF + T + G K L Sbjct: 253 VEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKL 312 Query: 430 KEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEAEVVLKKMMNSRTVPEICVYGSF 251 E ++ ++ + P+++ + + LC G+LDEA + ++M+ P++ Y + Sbjct: 313 DEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTL 372 Query: 250 IKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIMGLCQNGKLDEAVRFFNETA 83 I L A + +A++ F+ +KG +K DE+ V+ C+ + +EA F +E + Sbjct: 373 IDGLCKAGKLDEALKLFEEMVEKG-IKPDELTYRRVVESYCRAKRFEEARGFLSEVS 428 Score = 76.6 bits (187), Expect = 2e-12 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 1/197 (0%) Frame = -3 Query: 676 GFRVDCFSYYVLFRCFCRNGNVDEADWVLRALVKRKFHVDICVYGNFMYALCKLGKFREA 497 G R+D +Y + R G + A + L ++ + Y + LCK GK EA Sbjct: 11 GSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEA 70 Query: 496 KKLFLRLTKQDNVGGYKKLDFLKEGRRVIFQLKSEDNVPNILAFESYFRSLCDMGRLDEA 317 KLF + ++ G K P+++ + + LC G+LDEA Sbjct: 71 LKLFEEMVEK----GIK---------------------PDVVTYNTLIDGLCKAGKLDEA 105 Query: 316 EVVLKKMMNSRTVPEICVYGSFIKALFVADRDKDAIRFFQVEKKKGLVKVDEIA-SYVIM 140 + ++M+ P++ Y + I L A + +A++ F+ +KG +K D + + +I Sbjct: 106 LKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLID 164 Query: 139 GLCQNGKLDEAVRFFNE 89 GLC+ GKLDEA++ F E Sbjct: 165 GLCKAGKLDEALKLFEE 181