BLASTX nr result

ID: Angelica27_contig00011449 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00011449
         (654 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM80658.1 hypothetical protein DCAR_031885 [Daucus carota subsp...   124   1e-29
XP_017228456.1 PREDICTED: nuclear pore complex protein NUP62 iso...    87   4e-16
XP_017228455.1 PREDICTED: nuclear pore complex protein NUP62 iso...    87   4e-16
XP_017228454.1 PREDICTED: nuclear pore complex protein NUP62 iso...    87   4e-16
XP_019461543.1 PREDICTED: nuclear pore complex protein NUP62 iso...    62   1e-07
XP_019461542.1 PREDICTED: nuclear pore complex protein NUP62 iso...    62   1e-07
XP_019461541.1 PREDICTED: nuclear pore complex protein NUP62 iso...    62   1e-07
XP_019461540.1 PREDICTED: nuclear pore complex protein NUP62 iso...    62   1e-07
XP_019461539.1 PREDICTED: nuclear pore complex protein NUP62 iso...    62   1e-07
XP_010508222.1 PREDICTED: nuclear pore complex protein NUP62-lik...    58   3e-06
XP_019461538.1 PREDICTED: nuclear pore complex protein NUP62 iso...    57   8e-06

>KZM80658.1 hypothetical protein DCAR_031885 [Daucus carota subsp. sativus]
          Length = 532

 Score =  124 bits (312), Expect = 1e-29
 Identities = 87/179 (48%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
 Frame = -1

Query: 651 KGDDEEDELVVKLKPAISGMNEGF*IWGFWFWRSLCVCVEPKAAGAVTELEPNVPNVDVL 472
           KG DEE E    + P +  + E           ++ V VEPK  GAVTELEPN    ++L
Sbjct: 283 KGVDEEVEPKPVVAPKLGAVFEP---------NAVVVEVEPKPVGAVTELEPNG---ELL 330

Query: 471 ELVVEAFAPNGAVEEAKPKPVLAVTEFKFKTNGVVVVVDALTPNDVVV---------GLV 319
            L VEAF  NG VEEAKPKPV AVTEF+  T GVV  V+A  PNDVVV            
Sbjct: 331 VLAVEAFVANGVVEEAKPKPVDAVTEFEPNT-GVVAAVEAGAPNDVVVAETPNDDVAAPA 389

Query: 318 LDANTEPPPKGAEAEEFALTPNDVVAFA--LEPNGVVLLAIADDVVPNKLEPLDPNIDE 148
           +  N EPPPKG +       PN VV  A   EPNGVV++A+ADD VPNK+E +DPN +E
Sbjct: 390 VVPNNEPPPKG-DVVVVLDEPNGVVVVAGVEEPNGVVVVAVADDAVPNKVEAVDPNGEE 447


>XP_017228456.1 PREDICTED: nuclear pore complex protein NUP62 isoform X3 [Daucus
           carota subsp. sativus]
          Length = 785

 Score = 86.7 bits (213), Expect = 4e-16
 Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTS--FGVSANSSASAPFGGGSVFASSTNPTTTSFGVSASTTT---- 367
           A+ TTPFGSS  ATT+  FG S+N++ ++PFGGGS+F ++    T+SFGVSA+TT+    
Sbjct: 92  ATTTTPFGSSTPATTTTPFG-SSNTTTTSPFGGGSLFGTTAGAATSSFGVSATTTSFGAP 150

Query: 368 -----TTPFVLNLNSVTASTGFGFASSTAP 442
                TTP V   NSVTASTGFGFASST P
Sbjct: 151 ASTAATTP-VFGSNSVTASTGFGFASSTTP 179


>XP_017228455.1 PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 786

 Score = 86.7 bits (213), Expect = 4e-16
 Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTS--FGVSANSSASAPFGGGSVFASSTNPTTTSFGVSASTTT---- 367
           A+ TTPFGSS  ATT+  FG S+N++ ++PFGGGS+F ++    T+SFGVSA+TT+    
Sbjct: 92  ATTTTPFGSSTPATTTTPFG-SSNTTTTSPFGGGSLFGTTAGAATSSFGVSATTTSFGAP 150

Query: 368 -----TTPFVLNLNSVTASTGFGFASSTAP 442
                TTP V   NSVTASTGFGFASST P
Sbjct: 151 ASTAATTP-VFGSNSVTASTGFGFASSTTP 179


>XP_017228454.1 PREDICTED: nuclear pore complex protein NUP62 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 807

 Score = 86.7 bits (213), Expect = 4e-16
 Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 11/90 (12%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTS--FGVSANSSASAPFGGGSVFASSTNPTTTSFGVSASTTT---- 367
           A+ TTPFGSS  ATT+  FG S+N++ ++PFGGGS+F ++    T+SFGVSA+TT+    
Sbjct: 92  ATTTTPFGSSTPATTTTPFG-SSNTTTTSPFGGGSLFGTTAGAATSSFGVSATTTSFGAP 150

Query: 368 -----TTPFVLNLNSVTASTGFGFASSTAP 442
                TTP V   NSVTASTGFGFASST P
Sbjct: 151 ASTAATTP-VFGSNSVTASTGFGFASSTTP 179


>XP_019461543.1 PREDICTED: nuclear pore complex protein NUP62 isoform X6 [Lupinus
           angustifolius]
          Length = 744

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTSFGVSANSSASAPFGG-----GSVFASSTNPTTTS-FGVSASTTT 367
           AS+TTPFG S++A T+      SS++ PFGG      ++F  ST+ TTT+ FG S S TT
Sbjct: 201 ASSTTPFGVSSSAATTKPFGGTSSSTTPFGGTTTAATNLFGGSTSATTTTPFGGSTSATT 260

Query: 368 TTPFVLNLNSVTASTGFGFASSTA 439
           TTPF     S T +T FG ++S A
Sbjct: 261 TTPFG-GSTSATTTTPFGGSASAA 283


>XP_019461542.1 PREDICTED: nuclear pore complex protein NUP62 isoform X5 [Lupinus
           angustifolius]
          Length = 756

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTSFGVSANSSASAPFGG-----GSVFASSTNPTTTS-FGVSASTTT 367
           AS+TTPFG S++A T+      SS++ PFGG      ++F  ST+ TTT+ FG S S TT
Sbjct: 213 ASSTTPFGVSSSAATTKPFGGTSSSTTPFGGTTTAATNLFGGSTSATTTTPFGGSTSATT 272

Query: 368 TTPFVLNLNSVTASTGFGFASSTA 439
           TTPF     S T +T FG ++S A
Sbjct: 273 TTPFG-GSTSATTTTPFGGSASAA 295


>XP_019461541.1 PREDICTED: nuclear pore complex protein NUP62 isoform X4 [Lupinus
           angustifolius]
          Length = 758

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 36/78 (46%), Positives = 51/78 (65%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTSFGVSANSSASAPFGGGSVFASSTNPTTTSFGVSASTTTTTPFVL 385
           +S +T FG +A++TT FGVS++++ + PFGG     S++  TTT FG S S TTTTPF  
Sbjct: 226 SSASTLFGGTASSTTPFGVSSSAATTKPFGG-----STSATTTTPFGGSTSATTTTPFG- 279

Query: 386 NLNSVTASTGFGFASSTA 439
              S T +T FG ++S A
Sbjct: 280 GSTSATTTTPFGGSASAA 297


>XP_019461540.1 PREDICTED: nuclear pore complex protein NUP62 isoform X3 [Lupinus
           angustifolius]
          Length = 767

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTSFGVSANSSASAPFGG-----GSVFASSTNPTTTS-FGVSASTTT 367
           AS+TTPFG S++A T+      SS++ PFGG      ++F  ST+ TTT+ FG S S TT
Sbjct: 224 ASSTTPFGVSSSAATTKPFGGTSSSTTPFGGTTTAATNLFGGSTSATTTTPFGGSTSATT 283

Query: 368 TTPFVLNLNSVTASTGFGFASSTA 439
           TTPF     S T +T FG ++S A
Sbjct: 284 TTPFG-GSTSATTTTPFGGSASAA 306


>XP_019461539.1 PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Lupinus
           angustifolius]
          Length = 779

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
 Frame = +2

Query: 206 ASNTTPFGSSANATTSFGVSANSSASAPFGG-----GSVFASSTNPTTTS-FGVSASTTT 367
           AS+TTPFG S++A T+      SS++ PFGG      ++F  ST+ TTT+ FG S S TT
Sbjct: 236 ASSTTPFGVSSSAATTKPFGGTSSSTTPFGGTTTAATNLFGGSTSATTTTPFGGSTSATT 295

Query: 368 TTPFVLNLNSVTASTGFGFASSTA 439
           TTPF     S T +T FG ++S A
Sbjct: 296 TTPFG-GSTSATTTTPFGGSASAA 318


>XP_010508222.1 PREDICTED: nuclear pore complex protein NUP62-like [Camelina
           sativa]
          Length = 732

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 33/81 (40%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
 Frame = +2

Query: 206 ASNTTP-FGSSANATTSFGVSANSSASAPFGGGSVFASSTNPTTTSFG--VSASTTTTTP 376
           AS+TTP FG  A++TTSFG  +++S++  FG GS  +S+   +T SFG   +AS++ + P
Sbjct: 62  ASSTTPSFGFGASSTTSFGFGSSASSTPSFGFGSSASSTPASSTPSFGFGANASSSGSAP 121

Query: 377 FVLNLNSVTASTGFGFASSTA 439
            +   ++  AS+ FGF +S+A
Sbjct: 122 SLFGSSTTNASSPFGFVTSSA 142


>XP_019461538.1 PREDICTED: nuclear pore complex protein NUP62 isoform X1 [Lupinus
           angustifolius] OIW01084.1 hypothetical protein
           TanjilG_25192 [Lupinus angustifolius]
          Length = 798

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 19/98 (19%)
 Frame = +2

Query: 206 ASNTTPFG-------------SSANATTSFGVSANSSASAPFGGGSV--FASSTNPTTTS 340
           +S+TTPFG             +SA  TT FG S +++ + PFGG     F  +T   TT 
Sbjct: 258 SSSTTPFGGTTTAATNLFGGSTSATTTTPFGGSTSATTTTPFGGSQTTPFGGTTTAATTL 317

Query: 341 FGVSASTTTTTPFVLNLNSVTASTGFGF----ASSTAP 442
           FG S S TTTTPF     S  A+T FG     AS+T P
Sbjct: 318 FGGSTSATTTTPFG-GSASAAATTTFGGSLAPASNTTP 354


Top