BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00010426
         (1671 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017230659.1 PREDICTED: DNA-directed RNA polymerases IV and V ...  1013   0.0  
XP_017241678.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   902   0.0  
XP_016563842.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   880   0.0  
XP_009605686.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   878   0.0  
XP_019252729.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   877   0.0  
XP_016481856.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   876   0.0  
AAY68198.1 RNA polymerase IV second largest subunit, partial [Rh...   867   0.0  
XP_009787512.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   868   0.0  
XP_009787511.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   868   0.0  
XP_006351506.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   868   0.0  
XP_015069884.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   866   0.0  
XP_004236361.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   866   0.0  
XP_011082677.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   863   0.0  
GAV84304.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2...   860   0.0  
XP_006364477.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   858   0.0  
XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   857   0.0  
XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   856   0.0  
AAY68200.1 RNA polymerase IV second largest subunit, partial [An...   842   0.0  
XP_019266211.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...   856   0.0  
XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   855   0.0  

>XP_017230659.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Daucus carota subsp. sativus] XP_017230660.1 PREDICTED:
            DNA-directed RNA polymerases IV and V subunit 2-like
            [Daucus carota subsp. sativus] KZN10453.1 hypothetical
            protein DCAR_003109 [Daucus carota subsp. sativus]
          Length = 1176

 Score = 1013 bits (2620), Expect = 0.0
 Identities = 494/556 (88%), Positives = 517/556 (92%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIFCDAGRVLRPLL+++NIM+IKSI KGDYGFQSLLDN           EDCRTAWGI
Sbjct: 617  EVRIFCDAGRVLRPLLIVKNIMRIKSIKKGDYGFQSLLDNGIIELIGAEEEEDCRTAWGI 676

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            E+LR+  GGD+P+ YTHCELD S CLGLS GLVPFANHNHAKRVLYQSQKHSHQAIGYST
Sbjct: 677  EHLRSAYGGDVPMNYTHCELDMSFCLGLSAGLVPFANHNHAKRVLYQSQKHSHQAIGYST 736

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPSRPEFYNGQCAIVAVNVHFGY 1131
            TNPRIR DT+THQLYYPQKPLFRTMLSDCLGRPDCNITP RPEFYN QCAIVAVNVHFGY
Sbjct: 737  TNPRIRVDTLTHQLYYPQKPLFRTMLSDCLGRPDCNITPFRPEFYNSQCAIVAVNVHFGY 796

Query: 1130 NQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVGRVDS 951
            NQEDS+VMNRASAERGMFRSEHIRSYKADIYN+EAFSKPQK+ED MKFGKIQSRVGRV+ 
Sbjct: 797  NQEDSIVMNRASAERGMFRSEHIRSYKADIYNDEAFSKPQKVEDSMKFGKIQSRVGRVEC 856

Query: 950  LEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNFGIVS 771
            LEEDGFPYIGASL+ GDI+IGKHAESGADQSLKLKHTERGTV RVVLSANDEGKNFGIVS
Sbjct: 857  LEEDGFPYIGASLKAGDIIIGKHAESGADQSLKLKHTERGTVQRVVLSANDEGKNFGIVS 916

Query: 770  LRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLL 591
            LRQVR P LGDKFSSMHGQKGVLGFLE+QENFPFTAQGIVPDIVINPHAFPSRQTPGQLL
Sbjct: 917  LRQVRFPCLGDKFSSMHGQKGVLGFLEAQENFPFTAQGIVPDIVINPHAFPSRQTPGQLL 976

Query: 590  EAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRSLVFM 411
            EAALGKGIAL G EKYATP+ST  V+ IADQLHKAGF R GSERV DGRTGEMIR+LVFM
Sbjct: 977  EAALGKGIALGGNEKYATPYSTPSVEVIADQLHKAGFCRSGSERVYDGRTGEMIRTLVFM 1036

Query: 410  GPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANL 231
            GPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANL
Sbjct: 1037 GPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANL 1096

Query: 230  QERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVPYGAK 51
            QERLFLCSDY+QMHICRKCKHTANVIQRT  G HK+RGPYCRYCESAEDI+KVNVPYGAK
Sbjct: 1097 QERLFLCSDYAQMHICRKCKHTANVIQRTMGGKHKIRGPYCRYCESAEDIIKVNVPYGAK 1156

Query: 50   LLCQELFSMGISMKFE 3
            LL QELFSMGIS+KFE
Sbjct: 1157 LLSQELFSMGISIKFE 1172


>XP_017241678.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Daucus carota subsp. sativus] KZN01194.1 hypothetical
            protein DCAR_009948 [Daucus carota subsp. sativus]
          Length = 1179

 Score =  902 bits (2332), Expect = 0.0
 Identities = 436/556 (78%), Positives = 481/556 (86%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIFCDAGR+LRPLLV+ N+ KIKS+  GDY FQSLLD            EDC TAWGI
Sbjct: 620  EVRIFCDAGRILRPLLVVSNLRKIKSLKGGDYSFQSLLDAGVIELIGTEEEEDCCTAWGI 679

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            +YL  +  GD P KYTHCELD S  LGLS GL PF NH+HA+R LYQSQKHSHQAIG+ST
Sbjct: 680  KYLMMQTSGDTPKKYTHCELDMSFLLGLSAGLTPFCNHDHARRALYQSQKHSHQAIGFST 739

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPSRPEFYNGQCAIVAVNVHFGY 1131
            TNP IR DT T+QLYYPQ+PLF TMLS+CLG+ + +    +PEFYNGQCAIVAVNVH GY
Sbjct: 740  TNPSIRVDTNTNQLYYPQRPLFNTMLSECLGKAENSKMLPKPEFYNGQCAIVAVNVHLGY 799

Query: 1130 NQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVGRVDS 951
            NQEDSLVMNR+S ERGMFRSEHIR YKAD+ N+EA  K QK+ED + FGKI S++GRVDS
Sbjct: 800  NQEDSLVMNRSSLERGMFRSEHIRCYKADVNNKEATLKKQKIEDAINFGKIPSKIGRVDS 859

Query: 950  LEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNFGIVS 771
            L+EDGFP+IGA+L+ GDIVIGKHAESG DQS+KLKHTE+G V +V+LS+NDEGKNF +VS
Sbjct: 860  LDEDGFPFIGANLQTGDIVIGKHAESGVDQSVKLKHTEKGMVQKVILSSNDEGKNFAVVS 919

Query: 770  LRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLL 591
            LRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLL
Sbjct: 920  LRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPGQLL 979

Query: 590  EAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRSLVFM 411
            EAALGKGIAL GKE+YATPFST+ VD I  QLH+AGFSRWG+ERV +GRTGEM+ SLVFM
Sbjct: 980  EAALGKGIALGGKERYATPFSTVSVDAITSQLHRAGFSRWGNERVYNGRTGEMVHSLVFM 1039

Query: 410  GPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANL 231
            GPTCYQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGASANL
Sbjct: 1040 GPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANL 1099

Query: 230  QERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVPYGAK 51
             ERLF  SD SQMHICR+CKH ANVIQRT  G  K+RGPYCRYC+S EDIVKV+VPYGAK
Sbjct: 1100 HERLFTLSDCSQMHICRRCKHPANVIQRTVTGGRKIRGPYCRYCQSTEDIVKVSVPYGAK 1159

Query: 50   LLCQELFSMGISMKFE 3
            LLCQELFSMGIS+KFE
Sbjct: 1160 LLCQELFSMGISLKFE 1175


>XP_016563842.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Capsicum annuum] XP_016563843.1 PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Capsicum annuum]
          Length = 1217

 Score =  880 bits (2273), Expect = 0.0
 Identities = 426/560 (76%), Positives = 482/560 (86%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLLV+ N+ KIK++  GDYGFQSLLDN           EDCRTAWG+
Sbjct: 655  EVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGV 714

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EY+   +  D P KYTHCELD SL LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 715  EYILKADKEDPPAKYTHCELDMSLLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 774

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
             NP IR DT THQLYYPQ+PLFRTML+D LG+P C  +      RPE++NGQCAIVAVNV
Sbjct: 775  VNPNIRVDTNTHQLYYPQRPLFRTMLADSLGKPKCARSQKGMLPRPEYFNGQCAIVAVNV 834

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMNRAS ERGMFRSEH+RSYKAD+ N+EA +K  K+ED + FGK QS++G
Sbjct: 835  HLGYNQEDSLVMNRASLERGMFRSEHVRSYKADVDNKEAVAKKLKIEDSVNFGKTQSKIG 894

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+L+ GDI+IGK++ESG+D S+KLKHTERG V +V+LSANDEGKNF
Sbjct: 895  RVDSLDDDGFPFIGANLQSGDIIIGKYSESGSDHSIKLKHTERGMVQKVLLSANDEGKNF 954

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTP
Sbjct: 955  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTP 1014

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEA+LGKGIAL G +KYATPFSTL VD I DQLH  GFSRWG+ERV +GRTGEM+ S
Sbjct: 1015 GQLLEASLGKGIALGGGQKYATPFSTLSVDAIMDQLHARGFSRWGNERVYNGRTGEMVHS 1074

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 1075 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1134

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            +ANL ERLF  SD SQMHIC KCK+ ANVIQR+  G  K+RGP+CR+CES EDIVKVNVP
Sbjct: 1135 AANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQG-GKVRGPFCRFCESVEDIVKVNVP 1193

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KF+
Sbjct: 1194 YGAKLLCQELFSMGISLKFD 1213


>XP_009605686.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Nicotiana
            tomentosiformis]
          Length = 1220

 Score =  878 bits (2269), Expect = 0.0
 Identities = 429/561 (76%), Positives = 482/561 (85%), Gaps = 5/561 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLLV+ N+ KIK++  GDYGFQSLLDN           EDCRTAWG+
Sbjct: 658  EVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGV 717

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EYL   +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 718  EYLLKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 777

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCAIVAVN 1146
             NP IR DT THQLYYPQ+PLFRTMLSD LG+P        + P RPE+YNGQCAIVAVN
Sbjct: 778  VNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYARCQKGMLP-RPEYYNGQCAIVAVN 836

Query: 1145 VHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRV 966
            VH GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA  K  K+ED + FGK QS++
Sbjct: 837  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKI 896

Query: 965  GRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKN 786
            GRVDSL++DGFP+IGA+L+ GDI+IGKHAESGAD S+KLKHTERG V +V+LSANDEGKN
Sbjct: 897  GRVDSLDDDGFPFIGANLQSGDIIIGKHAESGADHSVKLKHTERGMVQKVLLSANDEGKN 956

Query: 785  FGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 606
            F +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT
Sbjct: 957  FAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 1016

Query: 605  PGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIR 426
            PGQLLEAALGKGIAL G +KYATPFSTL VD I +QLH  GFS+WG+ERV +GRTGEM++
Sbjct: 1017 PGQLLEAALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQ 1076

Query: 425  SLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHG 246
            +L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHG
Sbjct: 1077 NLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 1136

Query: 245  ASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNV 66
            A+ANL ERLF  SD SQMHIC KCK+ ANVIQR+  G  K+RGPYCR+CES EDIVKVNV
Sbjct: 1137 AAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQG-GKVRGPYCRFCESVEDIVKVNV 1195

Query: 65   PYGAKLLCQELFSMGISMKFE 3
            PYGAKLLCQELFSMGIS+KF+
Sbjct: 1196 PYGAKLLCQELFSMGISLKFD 1216


>XP_019252729.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata] XP_019252735.1 PREDICTED:
            DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata] XP_019252739.1 PREDICTED:
            DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana attenuata] OIT08688.1 dna-directed rna
            polymerases iv and v subunit 2 [Nicotiana attenuata]
          Length = 1218

 Score =  877 bits (2266), Expect = 0.0
 Identities = 427/560 (76%), Positives = 481/560 (85%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLLV+ N+ KIK++  GDYGFQSLLDN           EDCRTAWG+
Sbjct: 656  EVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGV 715

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EYL   +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 716  EYLLKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 775

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
             NP IR DT THQLYYPQ+PLFRTMLSD LG+P    +      RPE+YNGQCAIVAVNV
Sbjct: 776  VNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYAHSQKGMLPRPEYYNGQCAIVAVNV 835

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA  K  K+ED + FGK QS++G
Sbjct: 836  HLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIG 895

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+L+ GDI+IGK+AESGAD S+KLKHTERG V +V+LSANDEGKNF
Sbjct: 896  RVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNF 955

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP
Sbjct: 956  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 1015

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEAALGKGIAL G +KYATPFSTL VD I +QLH  GFS+WG+ERV +GRTGEM+++
Sbjct: 1016 GQLLEAALGKGIALGGSQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQN 1075

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 1076 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1135

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            +ANL ERLF  SD SQMHIC KCK+ ANVIQR+  G  K+RGPYCR+CES EDIVKVNVP
Sbjct: 1136 AANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQG-GKVRGPYCRFCESVEDIVKVNVP 1194

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KF+
Sbjct: 1195 YGAKLLCQELFSMGISLKFD 1214


>XP_016481856.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Nicotiana tabacum]
          Length = 1220

 Score =  876 bits (2263), Expect = 0.0
 Identities = 428/561 (76%), Positives = 482/561 (85%), Gaps = 5/561 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLLV+ N+ KIK++  GDYGFQSLLDN           EDCRTAWG+
Sbjct: 658  EVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGV 717

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EYL   +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 718  EYLLKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 777

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCAIVAVN 1146
             NP IR DT THQLYYPQ+PLFRTMLSD LG+P        + P RPE+YNGQCAIVAVN
Sbjct: 778  VNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYARCQKGMLP-RPEYYNGQCAIVAVN 836

Query: 1145 VHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRV 966
            VH GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA  K  K+ED + FGK QS++
Sbjct: 837  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKI 896

Query: 965  GRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKN 786
            GRVDSL++DGFP+IGA+L+ GDI+IGK+AESGAD S+KLKHTERG V +V+LSANDEGKN
Sbjct: 897  GRVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKN 956

Query: 785  FGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 606
            F +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT
Sbjct: 957  FAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 1016

Query: 605  PGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIR 426
            PGQLLEAALGKGIAL G +KYATPFSTL VD I +QLH  GFS+WG+ERV +GRTGEM++
Sbjct: 1017 PGQLLEAALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMVQ 1076

Query: 425  SLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHG 246
            +L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHG
Sbjct: 1077 NLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 1136

Query: 245  ASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNV 66
            A+ANL ERLF  SD SQMHIC KCK+ ANVIQR+  G  K+RGPYCR+CES EDIVKVNV
Sbjct: 1137 AAANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQG-GKVRGPYCRFCESVEDIVKVNV 1195

Query: 65   PYGAKLLCQELFSMGISMKFE 3
            PYGAKLLCQELFSMGIS+KF+
Sbjct: 1196 PYGAKLLCQELFSMGISLKFD 1216


>AAY68198.1 RNA polymerase IV second largest subunit, partial [Rhododendron
            macrophyllum]
          Length = 1019

 Score =  867 bits (2240), Expect = 0.0
 Identities = 422/561 (75%), Positives = 475/561 (84%), Gaps = 5/561 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVR+F DAGR+LRPLLV+ N+ KIK+   GDY FQSLLD            EDCRTAWGI
Sbjct: 456  EVRVFSDAGRILRPLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGTEEEEDCRTAWGI 515

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
             YL  EN     +KYTHCELD S  LGLS  ++PFANH+HA+RVLYQS+KHS QA+G++T
Sbjct: 516  NYLFMENEAKATVKYTHCELDMSFLLGLSAAIIPFANHDHARRVLYQSEKHSQQAMGFNT 575

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCAIVAVN 1146
            TNP IR DT THQLYYPQ+PLFRTM+SDCLG+P        I P R E++NGQCAIVAVN
Sbjct: 576  TNPNIRVDTNTHQLYYPQRPLFRTMVSDCLGKPGYPLGHNGIVP-RAEYFNGQCAIVAVN 634

Query: 1145 VHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRV 966
            VH GYNQEDSLVMNRAS ERGMFRSEHIRSYKAD+ N+E+  K  K ED + FGK+QS++
Sbjct: 635  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESVGKKPKFEDSVNFGKVQSKI 694

Query: 965  GRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKN 786
            GRVDSL++DGFP+IGA+L++GDIV+G+ AESGAD S+KLKHTERG V +VVLSANDEGKN
Sbjct: 695  GRVDSLDDDGFPFIGANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVLSANDEGKN 754

Query: 785  FGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 606
            F +VSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIV+NPHAFPSRQT
Sbjct: 755  FAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNPHAFPSRQT 814

Query: 605  PGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIR 426
            PGQLLEAALGKGIA  G +KYATPFSTL VD + DQLH+AGFSRWGSERV +GRTGEMI 
Sbjct: 815  PGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYNGRTGEMIH 874

Query: 425  SLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHG 246
            SLVFMGPT YQRLTHM+EDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHG
Sbjct: 875  SLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 934

Query: 245  ASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNV 66
            A+ANL ERLF  SD SQMHICRKC + ANVIQR   G  K+RGPYCR+CES E+IV+VNV
Sbjct: 935  AAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESVEEIVRVNV 994

Query: 65   PYGAKLLCQELFSMGISMKFE 3
            PYGAKLL QELFSMGI+MKF+
Sbjct: 995  PYGAKLLAQELFSMGITMKFD 1015


>XP_009787512.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
            [Nicotiana sylvestris]
          Length = 1216

 Score =  868 bits (2244), Expect = 0.0
 Identities = 424/560 (75%), Positives = 479/560 (85%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVR+F DAGR+LRPLLV+ N+ KIK++  GD GFQSLLDN           EDCRTAWG+
Sbjct: 654  EVRMFSDAGRILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGV 713

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EYL T +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 714  EYLLTADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 773

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
             NP IR DT THQLYYPQ+PLFRTMLSD LG+P    +      RPE+YNGQCAIVAVNV
Sbjct: 774  VNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNV 833

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMN AS ERGMFRSEH+RSYKA++ N+EA  K  K+ED + FGK QS++G
Sbjct: 834  HLGYNQEDSLVMNCASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIG 893

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+L+ GDI+IGK+AESGAD S+KLKHTERG V +V+LSANDEGKNF
Sbjct: 894  RVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNF 953

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP
Sbjct: 954  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 1013

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEAALGKGIAL G +KYATPFSTL VD I +QLH  GFS+WG+ERV +GRTGEM ++
Sbjct: 1014 GQLLEAALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMGQN 1073

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 1074 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1133

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            +ANL ERLF  SD SQMH+C KCK+ ANVIQR+  G  K+RGPYCR+CES EDIVKVNVP
Sbjct: 1134 AANLHERLFTLSDSSQMHVCGKCKNMANVIQRSVQG-GKVRGPYCRFCESVEDIVKVNVP 1192

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KF+
Sbjct: 1193 YGAKLLCQELFSMGISLKFD 1212


>XP_009787511.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
            [Nicotiana sylvestris]
          Length = 1226

 Score =  868 bits (2244), Expect = 0.0
 Identities = 424/560 (75%), Positives = 479/560 (85%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVR+F DAGR+LRPLLV+ N+ KIK++  GD GFQSLLDN           EDCRTAWG+
Sbjct: 664  EVRMFSDAGRILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTAWGV 723

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EYL T +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 724  EYLLTADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 783

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
             NP IR DT THQLYYPQ+PLFRTMLSD LG+P    +      RPE+YNGQCAIVAVNV
Sbjct: 784  VNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVAVNV 843

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMN AS ERGMFRSEH+RSYKA++ N+EA  K  K+ED + FGK QS++G
Sbjct: 844  HLGYNQEDSLVMNCASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQSKIG 903

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+L+ GDI+IGK+AESGAD S+KLKHTERG V +V+LSANDEGKNF
Sbjct: 904  RVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKNF 963

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP
Sbjct: 964  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 1023

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEAALGKGIAL G +KYATPFSTL VD I +QLH  GFS+WG+ERV +GRTGEM ++
Sbjct: 1024 GQLLEAALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEMGQN 1083

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 1084 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1143

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            +ANL ERLF  SD SQMH+C KCK+ ANVIQR+  G  K+RGPYCR+CES EDIVKVNVP
Sbjct: 1144 AANLHERLFTLSDSSQMHVCGKCKNMANVIQRSVQG-GKVRGPYCRFCESVEDIVKVNVP 1202

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KF+
Sbjct: 1203 YGAKLLCQELFSMGISLKFD 1222


>XP_006351506.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score =  868 bits (2242), Expect = 0.0
 Identities = 422/560 (75%), Positives = 477/560 (85%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF D+GR+LRPLLV+ N+ KIK++  GDYGFQSLLDN           EDCRTAWG+
Sbjct: 655  EVRIFSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWGV 714

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EY+   +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 715  EYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 774

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
             NP  R DT THQLYYPQ+PLFRTML+D LG+P C         RPE++NGQCAIVAVNV
Sbjct: 775  VNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVNV 834

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA +K  K+ED + FGK QS++G
Sbjct: 835  HLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKIG 894

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+L+ GDI+IGK AESGAD S+KLKHTERG V +V+LSANDEGKNF
Sbjct: 895  RVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGKNF 954

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTP
Sbjct: 955  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 1014

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEAALGKGIAL G +KYATPFSTL VD I +QL   GF+RWG+ERV +GRTGEM+ S
Sbjct: 1015 GQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVHS 1074

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 1075 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1134

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            +ANL ERLF  SD SQMHIC KCK+ ANVIQRT  G  K+RGP+CR+CES EDIVKVNVP
Sbjct: 1135 AANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQG-GKVRGPFCRFCESVEDIVKVNVP 1193

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KF+
Sbjct: 1194 YGAKLLCQELFSMGISLKFD 1213


>XP_015069884.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum pennellii]
          Length = 1217

 Score =  866 bits (2237), Expect = 0.0
 Identities = 422/561 (75%), Positives = 478/561 (85%), Gaps = 5/561 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF D GR+LRPLLV+ N+ KIK++  GDYGFQSLLDN           EDCRTAWG+
Sbjct: 655  EVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGV 714

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EY+   +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 715  EYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 774

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCAIVAVN 1146
             NP  R DT THQLYYPQ+PLFRTML+D LG+P C      + P RPE++NGQCAIVAVN
Sbjct: 775  VNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLP-RPEYFNGQCAIVAVN 833

Query: 1145 VHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRV 966
            VH GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA +K  K+ED + FGK QS++
Sbjct: 834  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKI 893

Query: 965  GRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKN 786
            GRVDSL++DGFP+IGA+L+ GDI+IGK +ESGAD S+KLKHTERG V +V+LSANDEGKN
Sbjct: 894  GRVDSLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKN 953

Query: 785  FGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 606
            F +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQT
Sbjct: 954  FAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQT 1013

Query: 605  PGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIR 426
            PGQLLEAALGKGIAL G +KYATPFSTL VD I +QL   GF+RWG+ERV +GRTGEM+ 
Sbjct: 1014 PGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVH 1073

Query: 425  SLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHG 246
            SL+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHG
Sbjct: 1074 SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 1133

Query: 245  ASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNV 66
            A+ANL ERLF  SD SQMHIC KCK+ ANVIQRT  G  K+RGP+CR+CES EDIVKVNV
Sbjct: 1134 AAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQG-GKVRGPFCRFCESVEDIVKVNV 1192

Query: 65   PYGAKLLCQELFSMGISMKFE 3
            PYGAKLLCQELFSMGIS+KF+
Sbjct: 1193 PYGAKLLCQELFSMGISLKFD 1213


>XP_004236361.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
            lycopersicum]
          Length = 1217

 Score =  866 bits (2237), Expect = 0.0
 Identities = 422/561 (75%), Positives = 478/561 (85%), Gaps = 5/561 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF D GR+LRPLLV+ N+ KIK++  GDYGFQSLLDN           EDCRTAWG+
Sbjct: 655  EVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWGV 714

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EY+   +  + P KYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 715  EYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 774

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCAIVAVN 1146
             NP  R DT THQLYYPQ+PLFRTML+D LG+P C      + P RPE++NGQCAIVAVN
Sbjct: 775  VNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLP-RPEYFNGQCAIVAVN 833

Query: 1145 VHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRV 966
            VH GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA +K  K+ED + FGK QS++
Sbjct: 834  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAMAKKLKIEDSVNFGKTQSKI 893

Query: 965  GRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKN 786
            GRVDSL++DGFP+IGA+L+ GDI+IGK +ESGAD S+KLKHTERG V +V+LSANDEGKN
Sbjct: 894  GRVDSLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGKN 953

Query: 785  FGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 606
            F +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQT
Sbjct: 954  FAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQT 1013

Query: 605  PGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIR 426
            PGQLLEAALGKGIAL G +KYATPFSTL VD I +QL   GF+RWG+ERV +GRTGEM+ 
Sbjct: 1014 PGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMVH 1073

Query: 425  SLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHG 246
            SL+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHG
Sbjct: 1074 SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 1133

Query: 245  ASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNV 66
            A+ANL ERLF  SD SQMHIC KCK+ ANVIQRT  G  K+RGP+CR+CES EDIVKVNV
Sbjct: 1134 AAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQG-GKVRGPFCRFCESVEDIVKVNV 1192

Query: 65   PYGAKLLCQELFSMGISMKFE 3
            PYGAKLLCQELFSMGIS+KF+
Sbjct: 1193 PYGAKLLCQELFSMGISLKFD 1213


>XP_011082677.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Sesamum indicum]
          Length = 1207

 Score =  863 bits (2231), Expect = 0.0
 Identities = 421/559 (75%), Positives = 474/559 (84%), Gaps = 3/559 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLL+++N+ KIK + KGD+ FQSLLD+           EDC+TAWG+
Sbjct: 646  EVRIFADAGRILRPLLIVQNLRKIKDL-KGDFSFQSLLDSSIIELIGPEEEEDCQTAWGV 704

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
             YL T    + PIKYTHCELD S  LGLSCG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 705  RYLFTAELENPPIKYTHCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFST 764

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS---RPEFYNGQCAIVAVNVH 1140
            TN  IR DT +HQLYYPQ+PLFRTMLSDCLGR   +       RPEF+NGQCAIVAVNVH
Sbjct: 765  TNSSIRVDTNSHQLYYPQRPLFRTMLSDCLGRSKYDHHKGMLPRPEFFNGQCAIVAVNVH 824

Query: 1139 FGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVGR 960
             GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N EA  K  K +DL+ FGK+QS++GR
Sbjct: 825  LGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVENSEAAGKKAKTDDLVSFGKMQSKIGR 884

Query: 959  VDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNFG 780
            VDSL++DGFPYIGA+L+ GDIVIGKHA SG D S+KLKHTE+G V +VVLSANDEGKNF 
Sbjct: 885  VDSLDDDGFPYIGANLQTGDIVIGKHAASGVDHSIKLKHTEKGMVQKVVLSANDEGKNFA 944

Query: 779  IVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTPG 600
            +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTPG
Sbjct: 945  VVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPG 1004

Query: 599  QLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRSL 420
            QLLEAAL KGIAL G  KYATPF++  V+ I  QLH+ GFSRWG ERV DGRTGE ++SL
Sbjct: 1005 QLLEAALAKGIALGGGLKYATPFTSPSVEDITAQLHRLGFSRWGDERVYDGRTGEKVQSL 1064

Query: 419  VFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGAS 240
            +FMGPT YQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA+
Sbjct: 1065 IFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAA 1124

Query: 239  ANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVPY 60
            ANL ERLF  SD SQMHICRKCK+ ANVIQR   G  K+RGPYCR+CES ED+V+VNVPY
Sbjct: 1125 ANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGRKIRGPYCRFCESVEDVVRVNVPY 1184

Query: 59   GAKLLCQELFSMGISMKFE 3
            GAKLLCQELFSMGIS+KF+
Sbjct: 1185 GAKLLCQELFSMGISLKFD 1203


>GAV84304.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2_7
            domain-containing protein/RNA_pol_Rpb2_2
            domain-containing protein/RNA_pol_Rpb2_1
            domain-containing protein/RNA_pol_Rpb2_3
            domain-containing protein/RNA_pol_Rpb2_4
            domain-containing protein/RNA_pol_Rpb2_5
            domain-containing protein [Cephalotus follicularis]
          Length = 1196

 Score =  860 bits (2222), Expect = 0.0
 Identities = 420/560 (75%), Positives = 475/560 (84%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            E+RIF DAGR+LRPLLV+ N++KIK+     Y FQS LD            EDCRTAWGI
Sbjct: 635  EIRIFSDAGRILRPLLVVENLIKIKAFKSDSYTFQSFLDKGIIELIGAEEEEDCRTAWGI 694

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            +YL  E     P+KYTHCELD S  LGLSCG++PFANH+HA+RVLYQSQKHS QAIG+ST
Sbjct: 695  KYLLMEVEEKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIGFST 754

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
            TNP IR DT++HQL+YPQ+PLFRTM SDCLG+P+  + P     +PE+YNGQ AIVAVNV
Sbjct: 755  TNPSIRVDTLSHQLHYPQRPLFRTMASDCLGKPEYPLGPKGIVPKPEYYNGQNAIVAVNV 814

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMNRAS ERGMFRSEHIRSYKA++ N+E   K +KLED + FGKIQS++G
Sbjct: 815  HLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELQDKKRKLEDCINFGKIQSKIG 874

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP++GA+L+ GDIVIG+ AESGAD S+KLKHTERG V +V+LS+NDEG NF
Sbjct: 875  RVDSLDDDGFPFVGANLQSGDIVIGRCAESGADHSIKLKHTERGMVQKVILSSNDEGTNF 934

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVR P LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQTP
Sbjct: 935  AVVSLRQVRYPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTP 994

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEAALGKGIA  G  +YATPFSTL VD I +QLH+AGFSRWG+ERV +GRTGEM++S
Sbjct: 995  GQLLEAALGKGIACGGLMRYATPFSTLSVDAITEQLHRAGFSRWGNERVYNGRTGEMVKS 1054

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGP  YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA
Sbjct: 1055 LIFMGPAFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 1114

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            SANL ERLF  SD SQMHICRKCK+ ANVIQR   G  K+RGPYCR+CES +DIVKV+VP
Sbjct: 1115 SANLHERLFTLSDSSQMHICRKCKNVANVIQRP--GGLKIRGPYCRFCESVDDIVKVSVP 1172

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KFE
Sbjct: 1173 YGAKLLCQELFSMGISLKFE 1192


>XP_006364477.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum] XP_015159439.1 PREDICTED:
            DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score =  858 bits (2218), Expect = 0.0
 Identities = 420/564 (74%), Positives = 474/564 (84%), Gaps = 8/564 (1%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKG----DYGFQSLLDNXXXXXXXXXXXEDCRT 1503
            EVRIF DAGR++RPLLV+ N+  IKS+  G    DYGFQ+LLD            EDCRT
Sbjct: 653  EVRIFSDAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRT 712

Query: 1502 AWGIEYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAI 1323
            AWG+EYL   +  + P+ YTHCELD S  LGLSCGL+PFANH+HA+RVLYQS+KHS QAI
Sbjct: 713  AWGVEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAI 772

Query: 1322 GYSTTNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITP----SRPEFYNGQCAIV 1155
            G+ST NP  R DT THQLYYPQ+PLF TMLSD LG+P C        SRPE+YNGQCAIV
Sbjct: 773  GFSTVNPNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIV 832

Query: 1154 AVNVHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQ 975
            AVNVH GYNQEDS+VMNRAS ERGMFRSEH+RSYKA++ N+EA  K  K+ED + FGK Q
Sbjct: 833  AVNVHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAMGKKSKVEDSVNFGKTQ 892

Query: 974  SRVGRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDE 795
            S++GRVDSL++DGFP+IGA+L+ GDI+IGK+AESGAD S+K+KHTERG V +V+LSAND+
Sbjct: 893  SKIGRVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDD 952

Query: 794  GKNFGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPS 615
            GKNF +VSLRQVRSP LGDKFSSMHGQKGVLG+LESQENFPFT QGIVPDIVINPHAFPS
Sbjct: 953  GKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPS 1012

Query: 614  RQTPGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGE 435
            RQTPGQLLEAALGKGIAL G EKYATPFS L VD I  QLH  GFSRWGSERV +GRTGE
Sbjct: 1013 RQTPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGE 1072

Query: 434  MIRSLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLI 255
            M+ SL+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLI
Sbjct: 1073 MVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 1132

Query: 254  AHGASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVK 75
            AHGA+ANL ERLF  SD SQMHIC KCK+ ANVIQR+  G  K+RGP+CR+CES EDIVK
Sbjct: 1133 AHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPG-GKIRGPFCRFCESVEDIVK 1191

Query: 74   VNVPYGAKLLCQELFSMGISMKFE 3
            V+VPYGAKLLCQELFSMGIS+KF+
Sbjct: 1192 VDVPYGAKLLCQELFSMGISLKFD 1215


>XP_002283296.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis
            vinifera] XP_010648748.1 PREDICTED: DNA-directed RNA
            polymerases IV and V subunit 2 [Vitis vinifera]
          Length = 1198

 Score =  857 bits (2215), Expect = 0.0
 Identities = 416/561 (74%), Positives = 480/561 (85%), Gaps = 5/561 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLLV+ N+ K+K+    D+ FQSLLD            EDC TAWGI
Sbjct: 636  EVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVELIGAEEEEDCSTAWGI 695

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            +YL  +   D P+KYTHCELD S  LGLSCG++P+ANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 696  KYL-LKGHDDPPVKYTHCELDMSFLLGLSCGIIPYANHDHARRVLYQSEKHSQQAIGFST 754

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCN-----ITPSRPEFYNGQCAIVAVN 1146
            TNP IR DT++HQLYYPQ+PLFRTM+SDCLG+P  +     I P RPE++NGQ AIVAVN
Sbjct: 755  TNPNIRVDTLSHQLYYPQRPLFRTMISDCLGKPGYSEGHKGIVP-RPEYFNGQIAIVAVN 813

Query: 1145 VHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRV 966
            VH GYNQEDSLVMNRAS ERGMFRSEHIRSYK+++ N E+  K +K ED + FGK+QS++
Sbjct: 814  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKSEVDNNESLDKKRKSEDSVHFGKMQSKI 873

Query: 965  GRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKN 786
            GRVDSL++DGFP+IGA+L++GDIVIG+ AESG D S+KLKHTERG V +VV+SAND+GKN
Sbjct: 874  GRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVVSANDDGKN 933

Query: 785  FGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 606
            F +VSLRQVR+P LGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINPHAFPSRQT
Sbjct: 934  FAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQT 993

Query: 605  PGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIR 426
            PGQLLEAALGKGIA  G  ++ATPFSTL VD IADQLH+AGFSRWG ERV +GRTGEM+R
Sbjct: 994  PGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYNGRTGEMLR 1053

Query: 425  SLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHG 246
            SL+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGG+KFGEMERDCLIAHG
Sbjct: 1054 SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEMERDCLIAHG 1113

Query: 245  ASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNV 66
            A+ANL ERLF  SD + MHICR+CK+ +NVIQR+  G  K+RGPYCRYCES+E+IVKVNV
Sbjct: 1114 AAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESSEEIVKVNV 1173

Query: 65   PYGAKLLCQELFSMGISMKFE 3
            PYGAKLLCQELFSMGIS+KFE
Sbjct: 1174 PYGAKLLCQELFSMGISLKFE 1194


>XP_011036682.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Populus euphratica]
          Length = 1190

 Score =  856 bits (2211), Expect = 0.0
 Identities = 416/560 (74%), Positives = 475/560 (84%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLLV+ N+ KIK+   G+Y F SLLD            EDC TAWGI
Sbjct: 627  EVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAWGI 686

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            ++L  +  G  P+KYTHCELD S  LGLSCG++PFANH+HA+RVLYQ+QKHS QAIG+ST
Sbjct: 687  KFLLADIEGKQPMKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFST 746

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC----NITPSRPEFYNGQCAIVAVNV 1143
            TNP IR DT++HQL+YPQ+PLFRTM+SDCLG+P      N    +PE +NGQ AIVAVNV
Sbjct: 747  TNPNIRVDTLSHQLHYPQRPLFRTMISDCLGKPGYPLGHNAVLPKPELFNGQNAIVAVNV 806

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMNRAS ERGMFRSEHIRSYKA++ N+E   K +K ED + FGKIQS++G
Sbjct: 807  HLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTDKRRKSEDSITFGKIQSKIG 866

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+++ GDIVIGK AESGAD S+KLKHTERG V +VVLS+NDEGKNF
Sbjct: 867  RVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEGKNF 926

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT QG+VPDIVINPHAFPSRQTP
Sbjct: 927  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSRQTP 986

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEAALGKGIA  G ++YATPFSTL VD I DQLH+A FSRWG+ERV +GRTGEM+RS
Sbjct: 987  GQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEMVRS 1046

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 1047 LIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1106

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            SANL ERLF  SD S+MHIC+KCK+ ANVIQR   G  K+RGPYCR CES +D++KV+VP
Sbjct: 1107 SANLHERLFTLSDSSEMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESVDDLIKVSVP 1166

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KF+
Sbjct: 1167 YGAKLLCQELFSMGISLKFD 1186


>AAY68200.1 RNA polymerase IV second largest subunit, partial [Antirrhinum majus]
          Length = 821

 Score =  842 bits (2174), Expect = 0.0
 Identities = 408/560 (72%), Positives = 471/560 (84%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLL+++ + KIK + KG++ FQSLLDN           EDCRTAWGI
Sbjct: 259  EVRIFADAGRILRPLLLVQKLKKIKEL-KGEFSFQSLLDNGIVEFIGAEEEEDCRTAWGI 317

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            +YL + +     +KYTHCELD S  LGLSCGL+PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 318  KYLFSADKEKPLVKYTHCELDCSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFST 377

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
            TNP IR DT +H LYYPQ+P+F TMLSD LG+   +         PEF+NGQCAIVAVNV
Sbjct: 378  TNPSIRVDTNSHNLYYPQRPIFGTMLSDSLGKSKYSSHHKGMLPHPEFFNGQCAIVAVNV 437

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDS+VMNRAS ERGMFR+EH+RSYKA++ N +A  K  K +DL+ FGK +S++G
Sbjct: 438  HLGYNQEDSIVMNRASMERGMFRTEHVRSYKAEVDNSDAPGKKLKPDDLVDFGKTESKIG 497

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+L+ GDIVIGKHA SG D S+KLKHTERG V +VVLS+ND+GKNF
Sbjct: 498  RVDSLDDDGFPFIGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVLSSNDDGKNF 557

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
            G+VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT +GIVPDIVINPHAFPSRQTP
Sbjct: 558  GVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKEGIVPDIVINPHAFPSRQTP 617

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLEAALGKGIAL G  KYATPFST  VD I  QLH+ GFSRWG ERV DGRTGE + S
Sbjct: 618  GQLLEAALGKGIALGGALKYATPFSTPSVDDITAQLHRLGFSRWGDERVYDGRTGEKVES 677

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRLTHMAEDK+KFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 678  LIFMGPTFYQRLTHMAEDKIKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 737

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            +ANL ERLF  SD SQMH+CRKC++ ANVIQR+  G  K+RGPYCR+C+S ED+V++NVP
Sbjct: 738  AANLHERLFTLSDSSQMHVCRKCQNMANVIQRSVFGGRKIRGPYCRFCDSVEDVVRLNVP 797

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFSMGIS+KF+
Sbjct: 798  YGAKLLCQELFSMGISLKFD 817


>XP_019266211.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases IV and V
            subunit 2-like [Nicotiana attenuata]
          Length = 1215

 Score =  856 bits (2211), Expect = 0.0
 Identities = 417/560 (74%), Positives = 475/560 (84%), Gaps = 4/560 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            E+RIF DAGR+LRPLLV+ ++ KIK++  GDYGFQ LL+N           EDCRTAWG+
Sbjct: 653  EIRIFSDAGRILRPLLVVSSLKKIKALKGGDYGFQRLLENGIIELIGPEEDEDCRTAWGV 712

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            EYL   +  + P KYTHCELD S  LGL CG++PFANH+HA+RVLYQS+KHS QAIG+ST
Sbjct: 713  EYLLKADKENPPAKYTHCELDMSFLLGLXCGVIPFANHDHARRVLYQSEKHSQQAIGFST 772

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDCNITPS----RPEFYNGQCAIVAVNV 1143
             NP IR DT THQLYYPQ+PLFRTMLSD LG+P           RPE++NGQCAIVAVNV
Sbjct: 773  VNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKNARNQKGMLQRPEYFNGQCAIVAVNV 832

Query: 1142 HFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRVG 963
            H GYNQEDSLVMNRAS ERGMFRSEH+RSYKA++ N+EA  K  K+ED + FGK QS++G
Sbjct: 833  HLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAIGKKPKVEDSVNFGKTQSKIG 892

Query: 962  RVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKNF 783
            RVDSL++DGFP+IGA+L+ GDI+IGK+AESGAD S+KLKHTERG V +V+LSANDEGK F
Sbjct: 893  RVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEGKIF 952

Query: 782  GIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 603
             +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP
Sbjct: 953  AVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQTP 1012

Query: 602  GQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIRS 423
            GQLLE+ALGKGIAL G +KYATPF TL VD I +QLH  GFSRWG+ERV +GRTGEM ++
Sbjct: 1013 GQLLESALGKGIALGGGQKYATPFXTLSVDAIVEQLHGRGFSRWGNERVYNGRTGEMAQN 1072

Query: 422  LVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGA 243
            L+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHGA
Sbjct: 1073 LIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGA 1132

Query: 242  SANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNVP 63
            +ANL ERLF  SD SQMHIC KCK+ ANVIQR+  G  K+RGPYCR+CES EDIVKV+VP
Sbjct: 1133 AANLHERLFTLSDSSQMHICGKCKNMANVIQRSVQG-GKVRGPYCRFCESVEDIVKVDVP 1191

Query: 62   YGAKLLCQELFSMGISMKFE 3
            YGAKLLCQELFS+GIS+KF+
Sbjct: 1192 YGAKLLCQELFSVGISLKFD 1211


>XP_012076429.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Jatropha curcas] XP_012076430.1 PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Jatropha curcas]
            KDP33515.1 hypothetical protein JCGZ_07086 [Jatropha
            curcas]
          Length = 1209

 Score =  855 bits (2210), Expect = 0.0
 Identities = 416/561 (74%), Positives = 473/561 (84%), Gaps = 5/561 (0%)
 Frame = -2

Query: 1670 EVRIFCDAGRVLRPLLVIRNIMKIKSINKGDYGFQSLLDNXXXXXXXXXXXEDCRTAWGI 1491
            EVRIF DAGR+LRPLLV+ N+ KIK+   G+Y FQSLLD            EDC TAWGI
Sbjct: 646  EVRIFADAGRILRPLLVVENLHKIKAFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWGI 705

Query: 1490 EYLRTENGGDLPIKYTHCELDRSLCLGLSCGLVPFANHNHAKRVLYQSQKHSHQAIGYST 1311
            ++L        P+KYTHCELD S  LGLSCG++PFANH+HA+RVLYQ+QKHS QAIG+ T
Sbjct: 706  KFLVAGVDKKQPLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPT 765

Query: 1310 TNPRIRADTITHQLYYPQKPLFRTMLSDCLGRPDC-----NITPSRPEFYNGQCAIVAVN 1146
            TNP IR DT++HQL+YPQ+PLFRT+ +DCLG+P        + P +PE +NGQ AIVAVN
Sbjct: 766  TNPNIRVDTLSHQLHYPQRPLFRTVTADCLGKPGYARGHHGMLP-KPELFNGQNAIVAVN 824

Query: 1145 VHFGYNQEDSLVMNRASAERGMFRSEHIRSYKADIYNEEAFSKPQKLEDLMKFGKIQSRV 966
            VH GYNQEDSLVMNRAS ERGMFRSEHIRSYKAD+ N+E   K +K ED + FGKIQS++
Sbjct: 825  VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKELLDKRRKFEDTVNFGKIQSKI 884

Query: 965  GRVDSLEEDGFPYIGASLRDGDIVIGKHAESGADQSLKLKHTERGTVHRVVLSANDEGKN 786
            GRVDSL++DGFP+IGA+L+ GDIVIG+ AESGAD S+KLKHTERG V +VVLS+NDEGKN
Sbjct: 885  GRVDSLDDDGFPFIGANLQSGDIVIGRFAESGADHSIKLKHTERGMVQKVVLSSNDEGKN 944

Query: 785  FGIVSLRQVRSPSLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSRQT 606
            F +VSLRQVRSP LGDKFSSMHGQKGVLGFLESQENFPFT  G+VPDIVINPHAFPSRQT
Sbjct: 945  FAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKDGVVPDIVINPHAFPSRQT 1004

Query: 605  PGQLLEAALGKGIALKGKEKYATPFSTLPVDGIADQLHKAGFSRWGSERVCDGRTGEMIR 426
            PGQLLEAALGKGIA  G  +YATPFSTL V+ I DQLH+AGFSRWG+E+VC+GRTGEM+R
Sbjct: 1005 PGQLLEAALGKGIACGGPMRYATPFSTLSVEAITDQLHRAGFSRWGNEKVCNGRTGEMVR 1064

Query: 425  SLVFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLIAHG 246
            SL+FMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGG+KFGEMERDCLIAHG
Sbjct: 1065 SLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG 1124

Query: 245  ASANLQERLFLCSDYSQMHICRKCKHTANVIQRTTMGTHKMRGPYCRYCESAEDIVKVNV 66
            ASANL ERLF  SD SQMHIC+ CK+ ANVI+RT   + K+R PYCR CESA+DIVKVNV
Sbjct: 1125 ASANLHERLFTLSDSSQMHICQNCKNVANVIERTVPPSRKIRAPYCRICESADDIVKVNV 1184

Query: 65   PYGAKLLCQELFSMGISMKFE 3
            PYGAKLLCQELFSMGIS+KFE
Sbjct: 1185 PYGAKLLCQELFSMGISLKFE 1205