BLASTX nr result

ID: Angelica27_contig00009962 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00009962
         (622 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017230202.1 PREDICTED: putative ribosome biogenesis protein C...    62   6e-08
XP_017236090.1 PREDICTED: ribosomal L1 domain-containing protein...    61   1e-07

>XP_017230202.1 PREDICTED: putative ribosome biogenesis protein C8F11.04 [Daucus
           carota subsp. sativus] KZN10568.1 hypothetical protein
           DCAR_003224 [Daucus carota subsp. sativus]
          Length = 473

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/44 (79%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
 Frame = +3

Query: 3   SKKKKGRIHEVKYMDVSSVGEDEVASDVDEG----EKVKNESEL 122
           +KKKKGRIHEVKYMDVS  GEDEVASDVDEG    EKV +ESEL
Sbjct: 278 NKKKKGRIHEVKYMDVS--GEDEVASDVDEGEKESEKVNDESEL 319


>XP_017236090.1 PREDICTED: ribosomal L1 domain-containing protein 1-like [Daucus
           carota subsp. sativus] XP_017236091.1 PREDICTED:
           ribosomal L1 domain-containing protein 1-like [Daucus
           carota subsp. sativus] XP_017236092.1 PREDICTED:
           ribosomal L1 domain-containing protein 1-like [Daucus
           carota subsp. sativus] XP_017236093.1 PREDICTED:
           ribosomal L1 domain-containing protein 1-like [Daucus
           carota subsp. sativus] XP_017236094.1 PREDICTED:
           ribosomal L1 domain-containing protein 1-like [Daucus
           carota subsp. sativus] XP_017236095.1 PREDICTED:
           ribosomal L1 domain-containing protein 1-like [Daucus
           carota subsp. sativus] KZN04914.1 hypothetical protein
           DCAR_005751 [Daucus carota subsp. sativus]
          Length = 448

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 4/44 (9%)
 Frame = +3

Query: 3   SKKKKGRIHEVKYMDVSSVGEDEVASDVDEG----EKVKNESEL 122
           +KKKKGRIHEVKYMDVS  GEDEVA+DVDEG    EKV +ESEL
Sbjct: 278 NKKKKGRIHEVKYMDVS--GEDEVANDVDEGEKESEKVNDESEL 319


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