BLASTX nr result
ID: Angelica27_contig00005877
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00005877
(3825 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017229043.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2308 0.0
XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2228 0.0
AAZ08457.1 RNA polymerase II second largest subunit [Rhododendro... 2227 0.0
KZV51965.1 DNA-directed RNA polymerase II subunit [Dorcoceras hy... 2217 0.0
XP_019266160.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2214 0.0
XP_009765275.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2212 0.0
XP_009605280.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2212 0.0
NP_001233889.1 DNA-directed RNA polymerase II subunit RPB2 [Sola... 2211 0.0
XP_015066015.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2211 0.0
XP_006347043.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2210 0.0
XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2209 0.0
XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2209 0.0
XP_012449722.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2209 0.0
GAV75726.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2... 2208 0.0
XP_010108197.1 DNA-directed RNA polymerase II subunit [Morus not... 2207 0.0
XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2207 0.0
CDO99545.1 unnamed protein product [Coffea canephora] 2206 0.0
XP_012830376.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2206 0.0
OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta] 2206 0.0
XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2204 0.0
>XP_017229043.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Daucus carota
subsp. sativus] KZN11420.1 hypothetical protein
DCAR_004076 [Daucus carota subsp. sativus]
Length = 1192
Score = 2308 bits (5980), Expect = 0.0
Identities = 1146/1178 (97%), Positives = 1146/1178 (97%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDES 3479
MDMEEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MDMEEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDES 60
Query: 3478 ADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTY 3299
ADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTY
Sbjct: 61 ADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTY 120
Query: 3298 SAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGE 3119
SAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGE
Sbjct: 121 SAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGE 180
Query: 3118 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTM 2939
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTM
Sbjct: 181 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTM 240
Query: 2938 FVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQM 2759
FVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQM
Sbjct: 241 FVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQM 300
Query: 2758 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYC 2579
MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYC
Sbjct: 301 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYC 360
Query: 2578 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRG 2399
ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRG
Sbjct: 361 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRG 420
Query: 2398 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 2219
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST
Sbjct: 421 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 480
Query: 2218 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAA 2039
LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAA
Sbjct: 481 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAA 540
Query: 2038 YPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNT 1859
YPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDM VNT
Sbjct: 541 YPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNT 600
Query: 1858 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVA 1679
EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVA
Sbjct: 601 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVA 660
Query: 1678 KGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFP 1499
KGF INDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFP
Sbjct: 661 KGFIEYIDTEEEETTMISMTINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFP 720
Query: 1498 DHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1319
DHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 721 DHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 780
Query: 1318 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 1139
GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR
Sbjct: 781 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 840
Query: 1138 ANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHST 959
ANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDA QGQ ASRYTRRDHST
Sbjct: 841 ANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAVQGQAASRYTRRDHST 900
Query: 958 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 779
SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 901 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 960
Query: 778 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 599
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 961 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1020
Query: 598 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 419
HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1021 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1080
Query: 418 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNSF 239
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNSF
Sbjct: 1081 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNSF 1140
Query: 238 ECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
ECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1141 ECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1178
>XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ziziphus
jujuba]
Length = 1191
Score = 2228 bits (5774), Expect = 0.0
Identities = 1101/1178 (93%), Positives = 1128/1178 (95%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDES 3479
M+ ++EYD YN+D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MEDDQEYDQQYNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 60
Query: 3478 ADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTY 3299
ADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRNLTY
Sbjct: 61 ADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY 120
Query: 3298 SAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGE 3119
SAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELGE
Sbjct: 121 SAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 180
Query: 3118 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTM 2939
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPSTM
Sbjct: 181 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTM 240
Query: 2938 FVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQM 2759
FVRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF DTQM
Sbjct: 241 FVRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFTDTQM 300
Query: 2758 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYC 2579
MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE+C
Sbjct: 301 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFC 360
Query: 2578 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRG 2399
ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVRG
Sbjct: 361 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRG 420
Query: 2398 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 2219
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST
Sbjct: 421 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 480
Query: 2218 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAA 2039
LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSAA
Sbjct: 481 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 540
Query: 2038 YPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNT 1859
YPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM VNT
Sbjct: 541 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNT 600
Query: 1858 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVA 1679
EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ESPEDGGWHDLV+
Sbjct: 601 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVS 660
Query: 1678 KGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFP 1499
KGF INDL AR NPEEAYSDTYTHCEIHPSLILGVCASIIPFP
Sbjct: 661 KGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFP 720
Query: 1498 DHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1319
DHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 721 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 780
Query: 1318 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 1139
GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR
Sbjct: 781 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 840
Query: 1138 ANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHST 959
ANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPIAQD+A QGQ ASRYTRRDHS
Sbjct: 841 ANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEA-QGQAASRYTRRDHSI 899
Query: 958 SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 779
SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
Sbjct: 900 SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM 959
Query: 778 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 599
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
Sbjct: 960 PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL 1019
Query: 598 HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 419
H+CGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
Sbjct: 1020 HRCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA 1079
Query: 418 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNSF 239
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNSF
Sbjct: 1080 EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF 1139
Query: 238 ECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
ECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1140 ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>AAZ08457.1 RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2227 bits (5770), Expect = 0.0
Identities = 1105/1175 (94%), Positives = 1129/1175 (96%)
Frame = -3
Query: 3649 EEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADI 3470
EEEYDP EDE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 6 EEEYDPTM-EDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 64
Query: 3469 EIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTYSAP 3290
EIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRNLTYSAP
Sbjct: 65 EIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAP 124
Query: 3289 LYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGECPY 3110
LY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELGECPY
Sbjct: 125 LYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 184
Query: 3109 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVR 2930
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPSTMFVR
Sbjct: 185 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVR 244
Query: 2929 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 2750
MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL
Sbjct: 245 MLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMEL 304
Query: 2749 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETK 2570
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGEYCETK
Sbjct: 305 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETK 364
Query: 2569 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRGYVQ 2390
KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVRGYVQ
Sbjct: 365 KAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQ 424
Query: 2389 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 2210
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH
Sbjct: 425 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSH 484
Query: 2209 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAAYPI 2030
LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSAAYPI
Sbjct: 485 LRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPI 544
Query: 2029 LEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNTEVG 1850
LEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM VNTEVG
Sbjct: 545 LEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVG 604
Query: 1849 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVAKGF 1670
VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+RKDI+ALQQ+E+PEDGGWHDLVAKGF
Sbjct: 605 VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664
Query: 1669 XXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 1490
INDL SAR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665 IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724
Query: 1489 QSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 1310
QSPRNTYQSAMGKQAMGIYVTN+QFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725 QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784
Query: 1309 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 1130
AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785 AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844
Query: 1129 MGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHSTSLR 950
MGMRHGSYDKLDDDGLAPPGTR SGEDV+IGKTTPIAQD+A QG A+RYTRRDHSTSLR
Sbjct: 845 MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEA-QGP-AARYTRRDHSTSLR 902
Query: 949 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 770
HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 903 HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 962
Query: 769 VEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 590
+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC
Sbjct: 963 MEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 1022
Query: 589 GYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 410
GYQMRGFETMYNGHTGRRLT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 1023 GYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1082
Query: 409 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNSFECR 230
SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGL+AIANLKKNSFECR
Sbjct: 1083 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECR 1142
Query: 229 SCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
CKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1143 GCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177
>KZV51965.1 DNA-directed RNA polymerase II subunit [Dorcoceras hygrometricum]
Length = 1194
Score = 2217 bits (5744), Expect = 0.0
Identities = 1101/1182 (93%), Positives = 1132/1182 (95%), Gaps = 4/1182 (0%)
Frame = -3
Query: 3658 MDMEEEY-DPAYNE---DEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3491
MD+EEEY +PAYNE D+ +DITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEYYEPAYNEEEEDDDDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3490 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3311
VDESADIEIRPESQHNPGHQ DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3310 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3131
NLTYSAPLY DVSKRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3130 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2951
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRP 240
Query: 2950 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2771
PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F+
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFS 300
Query: 2770 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2591
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 360
Query: 2590 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2411
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2410 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2231
DVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2230 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2051
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2050 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1871
GSAAYPILEFLEEWGTENFEEISPAVI Q+TKIFVNGCWVGIHR+PDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDMLVSTLRRLRRRV 600
Query: 1870 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1691
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIR+KDI+ALQQ+ESP++GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRKKDIQALQQRESPDEGGWH 660
Query: 1690 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1511
DLVAKGF I+DL SAR NP EAYSDTYTHCEIHPSLILGVCASI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMISMTISDLVSARINPSEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1510 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1331
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1330 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1151
QLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1150 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 971
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+ DDA QGQ A+RYT+R
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISADDA-QGQ-AARYTKR 898
Query: 970 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 791
DHSTSLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSTSLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 790 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 611
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 610 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 431
SKALHKCGYQMRGFETMYNGHTGRRL++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 430 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 251
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLK 1138
Query: 250 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
KNSFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>XP_019266160.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nicotiana
attenuata] OIT05504.1 dna-directed rna polymerase ii
subunit rpb2 [Nicotiana attenuata]
Length = 1191
Score = 2214 bits (5738), Expect = 0.0
Identities = 1099/1179 (93%), Positives = 1128/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MDMEEEY+ YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG+GEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEY 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 AYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI+ LQQ+ESPE+GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKG+ INDL AR NPEEAYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA+TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>XP_009765275.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana sylvestris]
Length = 1191
Score = 2212 bits (5733), Expect = 0.0
Identities = 1098/1179 (93%), Positives = 1128/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MDMEEEY+ YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG+GEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEY 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 AYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI+ LQQ+ESPE+GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKG+ INDL AR NPEEAYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA+TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKK+S
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKSS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>XP_009605280.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 2212 bits (5732), Expect = 0.0
Identities = 1098/1179 (93%), Positives = 1127/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MD EEEY+ YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDTEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVG+GEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEY 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 AYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI+ LQQ+ESPE+GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKG+ INDL AR NPEEAYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA+TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>NP_001233889.1 DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
Q42877.1 RecName: Full=DNA-directed RNA polymerase II
subunit RPB2; Short=RNA polymerase II subunit 2;
Short=RNA polymerase II subunit B2; AltName:
Full=DNA-directed RNA polymerase II 135 kDa polypeptide
AAC49273.1 RNA polymerase II subunit 2 [Solanum
lycopersicum]
Length = 1191
Score = 2211 bits (5729), Expect = 0.0
Identities = 1095/1179 (92%), Positives = 1129/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MDME+EY+P YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMA++QNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+I++KDI+ LQQ+ESP++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKG+ INDL AR NP +AYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA+TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>XP_015066015.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
pennellii]
Length = 1191
Score = 2211 bits (5728), Expect = 0.0
Identities = 1095/1179 (92%), Positives = 1128/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MDME+EY+P YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMA++QNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMADTQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+I++KDI+ LQQ+ESP++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKG+ INDL AR NP +AYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RATTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>XP_006347043.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
tuberosum]
Length = 1191
Score = 2210 bits (5727), Expect = 0.0
Identities = 1095/1179 (92%), Positives = 1128/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYN-EDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MD+E+EY+P YN +D+ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDLEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECP DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPST
Sbjct: 181 ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+I++KDI+ LQQ+ESP++GGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKG+ INDL AR NP +AYSDTYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ ASRYTR+DHS
Sbjct: 841 RATTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQ-ASRYTRKDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGI+PDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 959 MPWTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
curcas]
Length = 1193
Score = 2209 bits (5724), Expect = 0.0
Identities = 1099/1181 (93%), Positives = 1125/1181 (95%), Gaps = 3/1181 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEG---EDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIV 3488
MD E EYD N++E E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIV
Sbjct: 1 MDDEHEYDQPLNDEEDDGEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIV 60
Query: 3487 DESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRN 3308
DESADIEIRPESQHNPGHQ DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRN
Sbjct: 61 DESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRN 120
Query: 3307 LTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTE 3128
LTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTE
Sbjct: 121 LTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTE 180
Query: 3127 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPP 2948
LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPP
Sbjct: 181 LGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPP 240
Query: 2947 STMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFAD 2768
S+MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+D
Sbjct: 241 SSMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSD 300
Query: 2767 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG 2588
TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG
Sbjct: 301 TQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG 360
Query: 2587 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRD 2408
EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLT+D
Sbjct: 361 EYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKD 420
Query: 2407 VRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 2228
VR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY
Sbjct: 421 VRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTY 480
Query: 2227 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVG 2048
ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVG
Sbjct: 481 ASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVG 540
Query: 2047 SAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXX 1868
SAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM
Sbjct: 541 SAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVD 600
Query: 1867 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHD 1688
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ES E+GGWHD
Sbjct: 601 VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHD 660
Query: 1687 LVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASII 1508
LVAKGF I+DL AR NPEEAYSDTYTHCEIHPSLILGVCASII
Sbjct: 661 LVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASII 720
Query: 1507 PFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 1328
PFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ
Sbjct: 721 PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ 780
Query: 1327 LPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 1148
LPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
Sbjct: 781 LPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR 840
Query: 1147 PDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRD 968
PDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPIAQ++A QGQ ++RYTRRD
Sbjct: 841 PDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEA-QGQ-SARYTRRD 898
Query: 967 HSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQ 788
HS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQ
Sbjct: 899 HSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQ 958
Query: 787 EDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS 608
EDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS
Sbjct: 959 EDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS 1018
Query: 607 KALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTR 428
KALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTR
Sbjct: 1019 KALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTR 1078
Query: 427 QPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKK 248
QPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKK
Sbjct: 1079 QPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1138
Query: 247 NSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
NSFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 NSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
communis] EEF43271.1 DNA-directed RNA polymerase II
subunit, putative [Ricinus communis]
Length = 1194
Score = 2209 bits (5724), Expect = 0.0
Identities = 1098/1182 (92%), Positives = 1127/1182 (95%), Gaps = 4/1182 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYNED----EGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEI 3491
M+ ++EYD NED + ++ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MEDDQEYDQNLNEDYEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 3490 VDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLR 3311
VDESADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLR
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR 120
Query: 3310 NLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLT 3131
NLTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLT
Sbjct: 121 NLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT 180
Query: 3130 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRP 2951
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRP
Sbjct: 181 ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP 240
Query: 2950 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFA 2771
PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+
Sbjct: 241 PSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS 300
Query: 2770 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGV 2591
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGV
Sbjct: 301 DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV 360
Query: 2590 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTR 2411
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTR
Sbjct: 361 GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR 420
Query: 2410 DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 2231
DVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
Sbjct: 421 DVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT 480
Query: 2230 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTV 2051
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TV
Sbjct: 481 YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV 540
Query: 2050 GSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXX 1871
GSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM
Sbjct: 541 GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRV 600
Query: 1870 XVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWH 1691
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ES E+GGWH
Sbjct: 601 DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWH 660
Query: 1690 DLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASI 1511
DLVAKGF I+DL AR NPEEAYSDTYTHCEIHPSLILGVCASI
Sbjct: 661 DLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASI 720
Query: 1510 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 1331
IPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
Sbjct: 721 IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR 780
Query: 1330 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 1151
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
Sbjct: 781 QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG 840
Query: 1150 RPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRR 971
RPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPIAQ++A QGQ ++RYTRR
Sbjct: 841 RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEA-QGQ-SARYTRR 898
Query: 970 DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 791
DHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
Sbjct: 899 DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT 958
Query: 790 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 611
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
Sbjct: 959 QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI 1018
Query: 610 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 431
SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
Sbjct: 1019 SKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT 1078
Query: 430 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLK 251
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLK
Sbjct: 1079 RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLK 1138
Query: 250 KNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
KNSFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 KNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>XP_012449722.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii] XP_012449723.1 PREDICTED: DNA-directed RNA
polymerase II subunit RPB2 [Gossypium raimondii]
XP_017641873.1 PREDICTED: DNA-directed RNA polymerase II
subunit RPB2 [Gossypium arboreum] XP_017641874.1
PREDICTED: DNA-directed RNA polymerase II subunit RPB2
[Gossypium arboreum] KHG27061.1 DNA-directed RNA
polymerase II subunit RPB2 [Gossypium arboreum]
KJB68623.1 hypothetical protein B456_010G255400
[Gossypium raimondii] KJB68624.1 hypothetical protein
B456_010G255400 [Gossypium raimondii]
Length = 1189
Score = 2209 bits (5723), Expect = 0.0
Identities = 1096/1179 (92%), Positives = 1126/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEG-EDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
M+ + EYDP EDE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MEDDSEYDPQLMEDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPST
Sbjct: 181 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE+
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEF 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVG+HR+PDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+E+PEDGGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKGF INDL AR NPEEAYS+TYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSETYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RA TMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+Q++A QGQ ASRY++RDHS
Sbjct: 841 RATTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEA-QGQ-ASRYSKRDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+A
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>GAV75726.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2_7
domain-containing protein/RNA_pol_Rpb2_2
domain-containing protein/RNA_pol_Rpb2_1
domain-containing protein/RNA_pol_Rpb2_3
domain-containing protein/RNA_pol_Rpb2_4
domain-containing protein/RNA_pol_Rpb2_5
domain-containing protein [Cephalotus follicularis]
Length = 1192
Score = 2208 bits (5722), Expect = 0.0
Identities = 1095/1180 (92%), Positives = 1126/1180 (95%), Gaps = 2/1180 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAY--NEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVD 3485
MD ++EYD ED+GE+ITQ+DAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 1 MDDDQEYDQTLIDEEDDGEEITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 60
Query: 3484 ESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNL 3305
ESADIEIRPESQHNPGHQ+DFAETIYKI FGQI+LSKPMMTESDGETATLFPKAARLRNL
Sbjct: 61 ESADIEIRPESQHNPGHQSDFAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNL 120
Query: 3304 TYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTEL 3125
TYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTEL
Sbjct: 121 TYSAPLYVDVTKRVIKKGHDGEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 180
Query: 3124 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS 2945
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYA+V EVRSMAESQNRPPS
Sbjct: 181 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPS 240
Query: 2944 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADT 2765
TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DT
Sbjct: 241 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 300
Query: 2764 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE 2585
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAK+ILQKEMLPHVGVGE
Sbjct: 301 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKDILQKEMLPHVGVGE 360
Query: 2584 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDV 2405
YCETKKAYYFGYIIHRL+LCALG+R EDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDV
Sbjct: 361 YCETKKAYYFGYIIHRLVLCALGQRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 420
Query: 2404 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 2225
R YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 421 RSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 480
Query: 2224 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGS 2045
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGS
Sbjct: 481 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 540
Query: 2044 AAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXV 1865
AAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM V
Sbjct: 541 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV 600
Query: 1864 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDL 1685
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+E+PEDGGWHDL
Sbjct: 601 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDL 660
Query: 1684 VAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIP 1505
VAKG+ INDL AR NPEEAYS+TYTHCEIHPSLILGVCASIIP
Sbjct: 661 VAKGYIEYIDTEEEETTMISMTINDLVQARINPEEAYSETYTHCEIHPSLILGVCASIIP 720
Query: 1504 FPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1325
FPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 721 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 780
Query: 1324 PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 1145
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 781 PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 840
Query: 1144 DRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDH 965
DRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+ DDA QGQ ASRYTRRDH
Sbjct: 841 DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISPDDA-QGQ-ASRYTRRDH 898
Query: 964 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 785
S SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 899 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 958
Query: 784 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 605
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+
Sbjct: 959 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISR 1018
Query: 604 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 425
ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1019 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1078
Query: 424 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKN 245
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKN
Sbjct: 1079 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1138
Query: 244 SFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
SFECRSCKNKT+IVQVHIPYACKLLFQELMSMAIAPRM+T
Sbjct: 1139 SFECRSCKNKTEIVQVHIPYACKLLFQELMSMAIAPRMMT 1178
>XP_010108197.1 DNA-directed RNA polymerase II subunit [Morus notabilis] EXC18122.1
DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 2207 bits (5720), Expect = 0.0
Identities = 1090/1180 (92%), Positives = 1123/1180 (95%), Gaps = 2/1180 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEGED--ITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVD 3485
M+ + EYD YN+D+ +D ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 1 MEDDHEYDQQYNDDDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 60
Query: 3484 ESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNL 3305
ESADIEIRPESQHNPGHQ+DF ETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRNL
Sbjct: 61 ESADIEIRPESQHNPGHQSDFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 120
Query: 3304 TYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTEL 3125
TYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTEL
Sbjct: 121 TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 180
Query: 3124 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS 2945
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS
Sbjct: 181 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 240
Query: 2944 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADT 2765
TMFVRMLSRTS+KGGSSGQYIRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DT
Sbjct: 241 TMFVRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDT 300
Query: 2764 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE 2585
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVG GE
Sbjct: 301 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGE 360
Query: 2584 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDV 2405
+CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDV
Sbjct: 361 FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 420
Query: 2404 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 2225
RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 421 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 480
Query: 2224 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGS 2045
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGS
Sbjct: 481 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 540
Query: 2044 AAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXV 1865
AAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM V
Sbjct: 541 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV 600
Query: 1864 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDL 1685
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI+++DI ALQQ+E+PE+ GWHDL
Sbjct: 601 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDL 660
Query: 1684 VAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIP 1505
V+ GF INDL AR NPEEAYS+TYTHCEIHPSLILGVCASIIP
Sbjct: 661 VSNGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIP 720
Query: 1504 FPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1325
FPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 721 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 780
Query: 1324 PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 1145
PAGINAIVAIACYSGYNQEDSVIMNQS+IDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 781 PAGINAIVAIACYSGYNQEDSVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 840
Query: 1144 DRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDH 965
DR+NTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPIAQD+A QGQ ASRYTRRDH
Sbjct: 841 DRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEA-QGQAASRYTRRDH 899
Query: 964 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 785
S SLRHSE G+VDQVLLTTNADGLRFVKVRVRS+RIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 900 SISLRHSENGIVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQE 959
Query: 784 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 605
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
Sbjct: 960 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 1019
Query: 604 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 425
ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1020 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1079
Query: 424 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKN 245
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKN
Sbjct: 1080 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1139
Query: 244 SFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
SFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1140 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Theobroma
cacao] EOY28253.1 DNA-directed RNA polymerase family
protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 2207 bits (5720), Expect = 0.0
Identities = 1095/1179 (92%), Positives = 1127/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEG-EDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
M+ + EYDP +DE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MEDDSEYDPQLMDDEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 61 SADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT 120
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 121 YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 180
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPST
Sbjct: 181 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 240
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQ
Sbjct: 241 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQ 300
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVG++
Sbjct: 301 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDF 360
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 420
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 421 SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 480
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 481 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 540
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVG+HR+PDM VN
Sbjct: 541 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVN 600
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ESPEDGGWHDLV
Sbjct: 601 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLV 660
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKGF INDL AR NPEEAYS+TYTHCEIHPSLILGVCASIIPF
Sbjct: 661 AKGFIEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPF 720
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 721 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 780
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 781 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 840
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+Q++A QGQ ASRY+RRDHS
Sbjct: 841 RANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEA-QGQ-ASRYSRRDHS 898
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 899 ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 958
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+A
Sbjct: 959 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRA 1018
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1019 LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1078
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1079 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1138
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQV+IPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 FECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLT 1177
>CDO99545.1 unnamed protein product [Coffea canephora]
Length = 1193
Score = 2206 bits (5716), Expect = 0.0
Identities = 1091/1179 (92%), Positives = 1124/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDES 3479
MDME+EY+ DE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MDMEDEYEDNQYNDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 60
Query: 3478 ADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLTY 3299
ADIEIRPESQHNPGHQ+DFAET+YKISFGQI+LSKPMMTESDGETATLFPKAARLRNLTY
Sbjct: 61 ADIEIRPESQHNPGHQSDFAETVYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY 120
Query: 3298 SAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELGE 3119
SAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTL+QN+EKDLTELGE
Sbjct: 121 SAPLYVDVTKRVIKKGHDGEEVTETQDFGKVFIGKVPIMLRSSYCTLFQNSEKDLTELGE 180
Query: 3118 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTM 2939
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPPSTM
Sbjct: 181 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTM 240
Query: 2938 FVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQM 2759
FVRMLSR+SAKGG+SGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQM
Sbjct: 241 FVRMLSRSSAKGGASGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQM 300
Query: 2758 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYC 2579
MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYC
Sbjct: 301 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYC 360
Query: 2578 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVRG 2399
ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 361 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRA 420
Query: 2398 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 2219
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST
Sbjct: 421 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 480
Query: 2218 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSAA 2039
LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSAA
Sbjct: 481 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 540
Query: 2038 YPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVNT 1859
YPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHRDPDM VNT
Sbjct: 541 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNT 600
Query: 1858 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLVA 1679
EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI+ALQ +ESPE+GGWHDLVA
Sbjct: 601 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQARESPEEGGWHDLVA 660
Query: 1678 KGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPFP 1499
KGF INDL +AR NPEEAYSDTYTHCEIHPSLILGVCASIIPFP
Sbjct: 661 KGFIEYIDTEEEETTMISMTINDLVTARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFP 720
Query: 1498 DHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 1319
DHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 721 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 780
Query: 1318 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 1139
GINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR
Sbjct: 781 GINAIVAISCYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 840
Query: 1138 ANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAG-QGQVASRYTRRDHS 962
+NTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI QDDA +A+RYT+RDHS
Sbjct: 841 SNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIHQDDAQVPSALATRYTKRDHS 900
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 901 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 960
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MP+T+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 961 MPFTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1020
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFE MYNGHTGR LTA IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1021 LHKCGYQMRGFERMYNGHTGRPLTATIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1080
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKNS
Sbjct: 1081 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1140
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1141 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1179
>XP_012830376.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Erythranthe
guttata] EYU43393.1 hypothetical protein
MIMGU_mgv1a000385mg [Erythranthe guttata]
Length = 1197
Score = 2206 bits (5716), Expect = 0.0
Identities = 1089/1184 (91%), Positives = 1127/1184 (95%), Gaps = 6/1184 (0%)
Frame = -3
Query: 3658 MDMEEEY------DPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQ 3497
MDM+EE+ D + E++ E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQ
Sbjct: 1 MDMDEEFYEQGYPDEEFEEEDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ 60
Query: 3496 EIVDESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAAR 3317
EIVDESADIEIRPESQHNPGHQ DFAETIYKISFGQI+LSKPMMTESDGETATLFPKAAR
Sbjct: 61 EIVDESADIEIRPESQHNPGHQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAAR 120
Query: 3316 LRNLTYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKD 3137
LRNLTYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKD
Sbjct: 121 LRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD 180
Query: 3136 LTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQN 2957
LTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QN
Sbjct: 181 LTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQN 240
Query: 2956 RPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYD 2777
RPPSTMF+RML+RTSAKGGSSGQYIRATLPYIR+EIPIIIVFRALGFVADKDILEHICY+
Sbjct: 241 RPPSTMFIRMLARTSAKGGSSGQYIRATLPYIRSEIPIIIVFRALGFVADKDILEHICYN 300
Query: 2776 FADTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHV 2597
F DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTR++RIKYAKEILQKEMLPHV
Sbjct: 301 FQDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTRDRRIKYAKEILQKEMLPHV 360
Query: 2596 GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKL 2417
GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKL
Sbjct: 361 GVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL 420
Query: 2416 TRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR 2237
TRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR
Sbjct: 421 TRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR 480
Query: 2236 LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYV 2057
LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+
Sbjct: 481 LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI 540
Query: 2056 TVGSAAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXX 1877
TVGSAAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHR+PDM
Sbjct: 541 TVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRR 600
Query: 1876 XXXVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGG 1697
VNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI+ALQQ+ESP+DGG
Sbjct: 601 RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGG 660
Query: 1696 WHDLVAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCA 1517
WHDLVAKGF INDL SAR NP EAYSDTYTHCEIHPSLILGVCA
Sbjct: 661 WHDLVAKGFIEYIDTEEEETTMISMTINDLVSARINPGEAYSDTYTHCEIHPSLILGVCA 720
Query: 1516 SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLH 1337
SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLH
Sbjct: 721 SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH 780
Query: 1336 FRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED 1157
FRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED
Sbjct: 781 FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED 840
Query: 1156 FGRPDRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYT 977
FGRPDRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI D+A QGQ +RYT
Sbjct: 841 FGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEA-QGQANARYT 899
Query: 976 RRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMT 797
+RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMT
Sbjct: 900 KRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMT 959
Query: 796 YTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVD 617
YTQEDMPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVD
Sbjct: 960 YTQEDMPWTLEGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVD 1019
Query: 616 NISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQI 437
NISKALHKCGYQMRG+ETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQI
Sbjct: 1020 NISKALHKCGYQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQI 1079
Query: 436 LTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIAN 257
LTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCEKCGL+AIAN
Sbjct: 1080 LTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIAN 1139
Query: 256 LKKNSFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
LKKNSFECR+CKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1140 LKKNSFECRACKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1183
>OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta]
Length = 1192
Score = 2206 bits (5715), Expect = 0.0
Identities = 1095/1180 (92%), Positives = 1126/1180 (95%), Gaps = 2/1180 (0%)
Frame = -3
Query: 3658 MDMEEEYDPAYNEDEGED--ITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVD 3485
M+ ++EYD NE+E +D ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 1 MEDDQEYDQPMNEEEEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 60
Query: 3484 ESADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNL 3305
ESADIEIRPESQHNPGHQ+DFAETIYKI FGQI+LSKPMMTESDGETATLFPKAARLRNL
Sbjct: 61 ESADIEIRPESQHNPGHQSDFAETIYKICFGQIYLSKPMMTESDGETATLFPKAARLRNL 120
Query: 3304 TYSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTEL 3125
TYSAPLY DV+KRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTEL
Sbjct: 121 TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 180
Query: 3124 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPS 2945
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPS
Sbjct: 181 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 240
Query: 2944 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADT 2765
TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DT
Sbjct: 241 TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT 300
Query: 2764 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGE 2585
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAKEILQKEMLPHVGVGE
Sbjct: 301 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE 360
Query: 2584 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDV 2405
YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDV
Sbjct: 361 YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 420
Query: 2404 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 2225
R YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
Sbjct: 421 RSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 480
Query: 2224 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGS 2045
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGS
Sbjct: 481 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 540
Query: 2044 AAYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXV 1865
AAYPILEFLEEWGTENFEEISPAVI QATKIFVNGCWVGIHR+PDM V
Sbjct: 541 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDV 600
Query: 1864 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDL 1685
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLI++KDI ALQQ+ES E+GGWHDL
Sbjct: 601 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDL 660
Query: 1684 VAKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIP 1505
VAKGF I+DL AR NPEEAY+DTYTHCEIHPSLILGVCASIIP
Sbjct: 661 VAKGFIEYIDTEEEETTMISMTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIP 720
Query: 1504 FPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 1325
FPDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 721 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 780
Query: 1324 PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 1145
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 781 PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 840
Query: 1144 DRANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDH 965
DRANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+Q+DA QGQ ++RYTRRDH
Sbjct: 841 DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEDA-QGQ-SARYTRRDH 898
Query: 964 STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 785
S SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
Sbjct: 899 SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE 958
Query: 784 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK 605
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+
Sbjct: 959 DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISR 1018
Query: 604 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 425
ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
Sbjct: 1019 ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ 1078
Query: 424 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKN 245
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE+CGL+AIANLKKN
Sbjct: 1079 PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN 1138
Query: 244 SFECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
SFECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178
>XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ipomoea nil]
Length = 1190
Score = 2204 bits (5712), Expect = 0.0
Identities = 1098/1179 (93%), Positives = 1125/1179 (95%), Gaps = 1/1179 (0%)
Frame = -3
Query: 3658 MDMEEE-YDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDE 3482
MD+EEE Y+ YN+DE E+ITQEDAW VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDLEEEEYEQQYNDDE-EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 59
Query: 3481 SADIEIRPESQHNPGHQNDFAETIYKISFGQIFLSKPMMTESDGETATLFPKAARLRNLT 3302
SADIEIRPESQHNPGHQ+DFAETIYKI+FGQI+LSKPMMTESDGETATLFPKAARLRNLT
Sbjct: 60 SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT 119
Query: 3301 YSAPLYADVSKRVIKKGHDGEEVTETQDFNKVFIGKVPIMLRSSYCTLYQNNEKDLTELG 3122
YSAPLY DVSKRVIKKGHDGEEVTETQDF KVFIGKVPIMLRSSYCTLYQN+EKDLTELG
Sbjct: 120 YSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG 179
Query: 3121 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPST 2942
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPST
Sbjct: 180 ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST 239
Query: 2941 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQ 2762
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DT
Sbjct: 240 MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTP 299
Query: 2761 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY 2582
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYAK+ILQKEMLPHVGVGEY
Sbjct: 300 MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGEY 359
Query: 2581 CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRMDLAGPLLGGLFRMLFRKLTRDVR 2402
CETKKAYYFGYIIHRLLLCA+GRRAEDDRDHYGNKR+DLAGPLLGGLFRMLFRKLTRDVR
Sbjct: 360 CETKKAYYFGYIIHRLLLCAIGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR 419
Query: 2401 GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 2222
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
Sbjct: 420 SYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS 479
Query: 2221 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYVTVGSA 2042
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY+TVGSA
Sbjct: 480 TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA 539
Query: 2041 AYPILEFLEEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXXVN 1862
AYPILEFLEEWGTENFEEISPAVI QATKIFVNG WVGIHRDPDM VN
Sbjct: 540 AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGGWVGIHRDPDMLVRTLRRLRRRVDVN 599
Query: 1861 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRRKDIEALQQKESPEDGGWHDLV 1682
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIR++DI+ALQQ+ESPE+GGWHDLV
Sbjct: 600 TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRKRDIQALQQRESPEEGGWHDLV 659
Query: 1681 AKGFXXXXXXXXXXXXXXXXXINDLRSARENPEEAYSDTYTHCEIHPSLILGVCASIIPF 1502
AKGF INDL AR NP EAYS TYTHCEIHPSLILGVCASIIPF
Sbjct: 660 AKGFIEYIDTEEEETTMISMTINDLIQARLNPGEAYSVTYTHCEIHPSLILGVCASIIPF 719
Query: 1501 PDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 1322
PDHNQSPRNTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
Sbjct: 720 PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP 779
Query: 1321 AGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 1142
AGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
Sbjct: 780 AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD 839
Query: 1141 RANTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPIAQDDAGQGQVASRYTRRDHS 962
RANTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+QDDA QGQ A RYT+RDHS
Sbjct: 840 RANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDA-QGQNA-RYTKRDHS 897
Query: 961 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED 782
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRS+RIPQIGDKFSSRHGQKGTVGMTYTQED
Sbjct: 898 TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQED 957
Query: 781 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 602
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 958 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1017
Query: 601 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 422
LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1018 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1077
Query: 421 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLVAIANLKKNS 242
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCE CGL+AIANLKK+S
Sbjct: 1078 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSS 1137
Query: 241 FECRSCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 125
FECR CKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1138 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1176