BLASTX nr result
ID: Angelica27_contig00001855
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00001855
(2175 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017236718.1 PREDICTED: THO complex subunit 4A-like [Daucus ca... 328 e-104
XP_017236634.1 PREDICTED: THO complex subunit 4A-like [Daucus ca... 281 1e-86
CDP09017.1 unnamed protein product [Coffea canephora] 238 7e-70
KVI11994.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu... 230 5e-67
XP_019199403.1 PREDICTED: THO complex subunit 4A-like [Ipomoea nil] 228 2e-66
OAY37838.1 hypothetical protein MANES_11G133200 [Manihot esculenta] 226 1e-65
KHN32110.1 RNA and export factor-binding protein 2 [Glycine soja] 225 4e-65
XP_014620021.1 PREDICTED: THO complex subunit 4A [Glycine max] 225 4e-65
KHN21975.1 RNA and export factor-binding protein 2 [Glycine soja] 224 7e-65
XP_014619530.1 PREDICTED: THO complex subunit 4A-like [Glycine m... 224 7e-65
XP_015058964.1 PREDICTED: THO complex subunit 4A [Solanum pennel... 223 2e-64
NP_001308426.1 RNA-binding (RRM/RBD/RNP motifs) family protein [... 223 2e-64
XP_010260105.1 PREDICTED: THO complex subunit 4A [Nelumbo nucifera] 223 3e-64
XP_015158895.1 PREDICTED: THO complex subunit 4A-like [Solanum t... 222 8e-64
XP_002531375.1 PREDICTED: THO complex subunit 4A [Ricinus commun... 220 3e-63
XP_010253243.1 PREDICTED: THO complex subunit 4A-like isoform X1... 220 3e-63
XP_010043580.1 PREDICTED: THO complex subunit 4A [Eucalyptus gra... 219 1e-62
OMO97180.1 hypothetical protein COLO4_14838 [Corchorus olitorius] 218 2e-62
XP_016556239.1 PREDICTED: THO complex subunit 4A [Capsicum annuum] 218 3e-62
XP_002284215.1 PREDICTED: THO complex subunit 4A [Vitis vinifera... 218 3e-62
>XP_017236718.1 PREDICTED: THO complex subunit 4A-like [Daucus carota subsp.
sativus] KZN04477.1 hypothetical protein DCAR_005314
[Daucus carota subsp. sativus]
Length = 242
Score = 328 bits (841), Expect = e-104
Identities = 179/246 (72%), Positives = 181/246 (73%)
Frame = +2
Query: 233 MSALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXNNRSSYRPAPYSSKAPDSVWQHD 412
MSALDKSLDDLINDNKK NNRSS RPAPYSSKAPDS WQHD
Sbjct: 1 MSALDKSLDDLINDNKKSSRGGRGRGRSYGPGPARRSNNRSSNRPAPYSSKAPDSAWQHD 60
Query: 413 MFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVHYD 592
MFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVHYD
Sbjct: 61 MFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVHYD 120
Query: 593 RSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXXXX 772
RSGRSKGTAEVVFSRRQDALSAV+KYNNVQLDGKPMKVEIVGTNIVTPAAG
Sbjct: 121 RSGRSKGTAEVVFSRRQDALSAVMKYNNVQLDGKPMKVEIVGTNIVTPAAGQPFINNNVS 180
Query: 773 XXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKYHA 952
G+PRSNQE GEKLSSDDLDADLEKYHA
Sbjct: 181 NFNGVPRSNQE----RGGFGRPRGGGGRGRGSGRGRGSGRGRGEKLSSDDLDADLEKYHA 236
Query: 953 SSMQIN 970
SSMQIN
Sbjct: 237 SSMQIN 242
>XP_017236634.1 PREDICTED: THO complex subunit 4A-like [Daucus carota subsp.
sativus]
Length = 241
Score = 281 bits (720), Expect = 1e-86
Identities = 159/247 (64%), Positives = 166/247 (67%), Gaps = 1/247 (0%)
Frame = +2
Query: 233 MSALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXNNRSSYRPAPY-SSKAPDSVWQH 409
MS LD++LDD+I NKK NNRSS RPAPY SS+APDS W+H
Sbjct: 1 MSGLDQTLDDIIKSNKKSGGGGGRGRSSGPGPARRS-NNRSSNRPAPYASSRAPDSAWKH 59
Query: 410 DMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVHY 589
DMFSSDQAMANQGY NR SSIETGTKLYISNLDYGVSQEDIKELF E+GDLKR VVHY
Sbjct: 60 DMFSSDQAMANQGYGGGNRGSSIETGTKLYISNLDYGVSQEDIKELFTEMGDLKRCVVHY 119
Query: 590 DRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXXX 769
DRSGRSKGTAEVVFSRRQDALSAV KYNNVQLDGKPMKVEIVGTNIVTPAA
Sbjct: 120 DRSGRSKGTAEVVFSRRQDALSAVTKYNNVQLDGKPMKVEIVGTNIVTPAARQPSANGNG 179
Query: 770 XXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKYH 949
G+PRS Q GEKLS DDLDADLEKYH
Sbjct: 180 SNFNGVPRSGQ-----GRGGFGRSRGGSRGRGSGRGQGSGRGRGEKLSQDDLDADLEKYH 234
Query: 950 ASSMQIN 970
A SMQIN
Sbjct: 235 AESMQIN 241
>CDP09017.1 unnamed protein product [Coffea canephora]
Length = 253
Score = 238 bits (607), Expect = 7e-70
Identities = 138/253 (54%), Positives = 156/253 (61%), Gaps = 8/253 (3%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX--NNRSSYRPAPYSS-KAPDSVWQ 406
+ALD +LDDLI NKK NNR++ R PY + KAPDSVW
Sbjct: 4 AALDMTLDDLIKQNKKPSGGGGGRGRGRGSGPGPSRRFNNRAANRATPYGAPKAPDSVWT 63
Query: 407 HDMFSSDQAMANQGYVD-----RNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLK 571
HDMFSSDQAMA G + RAS+IETGTKLYISNLDYGVS EDIKELF+E+GDLK
Sbjct: 64 HDMFSSDQAMAYVGQLGVGGGGGGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLK 123
Query: 572 RSVVHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXX 751
RS +HYDRSGRSKGTAE+VFSRRQDA +AV +YN VQLDGKPMK+EIVGTNIVTPAAG
Sbjct: 124 RSTIHYDRSGRSKGTAEIVFSRRQDAAAAVKRYNGVQLDGKPMKIEIVGTNIVTPAAGPQ 183
Query: 752 XXXXXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDA 931
GIPRS Q GEK+S++ LDA
Sbjct: 184 FPGGAFGDSNGIPRSGQ---GRGGSFGRPRGGGGRGRGFGRGRGRGRGRGEKISAEALDA 240
Query: 932 DLEKYHASSMQIN 970
DLE YH SM+ N
Sbjct: 241 DLENYHKESMEDN 253
>KVI11994.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 249
Score = 230 bits (587), Expect = 5e-67
Identities = 133/249 (53%), Positives = 150/249 (60%), Gaps = 4/249 (1%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX--NNRSSYRPAPYSS-KAPDSVWQ 406
+ALD SLDDLI +NKK NNR + R PY KAPD+ W+
Sbjct: 4 AALDMSLDDLIKNNKKSGGGGDGRGRGRPSAPGPTRRFNNRGANRATPYGGPKAPDAAWK 63
Query: 407 HDMFS-SDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVV 583
HDMF +DQ M N G R S+IETGTKLYISNLDYGVS EDIKELFAE+GDLK+ +
Sbjct: 64 HDMFGVADQVMGNVG--PGGRPSAIETGTKLYISNLDYGVSNEDIKELFAEVGDLKKYSI 121
Query: 584 HYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXX 763
HYDRSGRSKGTAE+VFSRRQDAL+AV +YNNVQLDGKPMK+EIVG NIV P G
Sbjct: 122 HYDRSGRSKGTAEIVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGLNIVAPVGGLPLANN 181
Query: 764 XXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEK 943
G PRS Q GEK+S+DDLDADLEK
Sbjct: 182 SIGNMNGFPRSGQ-GRNAGFGRSRGGGGGGGGRGSARGRGRGRGRGEKISADDLDADLEK 240
Query: 944 YHASSMQIN 970
YH+ SMQ N
Sbjct: 241 YHSESMQTN 249
>XP_019199403.1 PREDICTED: THO complex subunit 4A-like [Ipomoea nil]
Length = 245
Score = 228 bits (582), Expect = 2e-66
Identities = 135/248 (54%), Positives = 155/248 (62%), Gaps = 3/248 (1%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS-KAPDSVWQH 409
+AL SLDDLI NK+ NRS+ R APY++ KAPDS W H
Sbjct: 4 AALSMSLDDLIKKNKRSGGGNSRGRGRGSAPGPARRIPNRSANRSAPYATAKAPDSAWNH 63
Query: 410 DMFSSDQAMANQGY-VDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 586
DMF++DQ MA G+ V RASSIETGTKLY+SNL+YGVS EDIKELF+E+GDLKR +H
Sbjct: 64 DMFATDQPMAFDGHIVGGARASSIETGTKLYVSNLEYGVSNEDIKELFSEVGDLKRYGIH 123
Query: 587 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 766
YDRSGRSKGTAEVV+SRRQDAL+AV +YNNVQLDGKPMK+EIVGTNIVT
Sbjct: 124 YDRSGRSKGTAEVVYSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIVT---APPSTVGS 180
Query: 767 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 946
GIPRS Q GEK+S+DDLDADLEKY
Sbjct: 181 VGNSNGIPRSGQ---GRGGGFGRLRGGRGRGRGFQAGRGRGRDRGEKVSADDLDADLEKY 237
Query: 947 HASSMQIN 970
HA +MQ N
Sbjct: 238 HAEAMQTN 245
>OAY37838.1 hypothetical protein MANES_11G133200 [Manihot esculenta]
Length = 239
Score = 226 bits (577), Expect = 1e-65
Identities = 134/247 (54%), Positives = 154/247 (62%), Gaps = 2/247 (0%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYS-SKAPDSVWQH 409
SALD SLDD+I +NKK NR + R APY+ SKAP++ WQH
Sbjct: 3 SALDMSLDDIIKNNKKSGSGNARGRGRPSGPGPARRLANRGANRAAPYTASKAPETTWQH 62
Query: 410 DMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVHY 589
DMF+ DQ MA Y RAS+IETGTKLYISNLDYGVS EDIKELF+E+GDLKR +HY
Sbjct: 63 DMFT-DQGMA---YGQAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHY 118
Query: 590 DRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXXX 769
DRSGRSKGTAEVVFSRR DAL+AV +YNNVQLDGKPMK+EIVGTNI TPAA
Sbjct: 119 DRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA-PPANNVSF 177
Query: 770 XXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKYH 949
G+PR Q GEK+S++DLDADLEKYH
Sbjct: 178 GNSNGVPRGGQ-----GRGGTTGRPRGGGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYH 232
Query: 950 ASSMQIN 970
+ +MQ N
Sbjct: 233 SEAMQTN 239
>KHN32110.1 RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 225 bits (574), Expect = 4e-65
Identities = 131/248 (52%), Positives = 156/248 (62%), Gaps = 3/248 (1%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS-KAPDSVWQH 409
+A+D SLDD+I +NKK NR++ R APY++ KAP++ WQH
Sbjct: 3 AAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYATAKAPEATWQH 62
Query: 410 DMFSSDQAMANQGY-VDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 586
D+++ DQ +A GY RA+SIETGTKLYISNLDYGVS +DIKELFAE+GDLKR VH
Sbjct: 63 DLYA-DQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAVH 121
Query: 587 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 766
YDRSGRSKGTAEVVFSRR DA+SAV +YNNVQLDGKPMK+EIVGTNI TP
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVA-PAPNGA 180
Query: 767 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 946
G+PRS Q GEK+S+DDLDADLEKY
Sbjct: 181 IGNFNGVPRSGQ-GRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKY 239
Query: 947 HASSMQIN 970
HA +MQ+N
Sbjct: 240 HAEAMQLN 247
>XP_014620021.1 PREDICTED: THO complex subunit 4A [Glycine max]
Length = 247
Score = 225 bits (574), Expect = 4e-65
Identities = 131/248 (52%), Positives = 156/248 (62%), Gaps = 3/248 (1%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYS-SKAPDSVWQH 409
+A+D SLDD+I +NKK NR++ R APY+ +KAP++ WQH
Sbjct: 3 AAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYAPAKAPEATWQH 62
Query: 410 DMFSSDQAMANQGY-VDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 586
D+++ DQ +A GY RA+SIETGTKLYISNLDYGVS +DIKELFAE+GDLKR VH
Sbjct: 63 DLYA-DQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSNDDIKELFAEVGDLKRHAVH 121
Query: 587 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 766
YDRSGRSKGTAEVVFSRR DA+SAV +YNNVQLDGKPMK+EIVGTNI TP
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIEIVGTNISTPGVA-PAPNGA 180
Query: 767 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 946
G+PRS Q GEK+S+DDLDADLEKY
Sbjct: 181 IGNFNGVPRSGQ-GRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKY 239
Query: 947 HASSMQIN 970
HA +MQ+N
Sbjct: 240 HAEAMQLN 247
>KHN21975.1 RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 224 bits (572), Expect = 7e-65
Identities = 130/248 (52%), Positives = 156/248 (62%), Gaps = 3/248 (1%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS-KAPDSVWQH 409
+A+D SLDD+I +NKK NR++ R APY++ KAP++ WQH
Sbjct: 3 AAMDMSLDDIIKNNKKSGSGSSRGRTRPSGSGPTRRLPNRAANRAAPYATAKAPEATWQH 62
Query: 410 DMFSSDQAMANQGY-VDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 586
D+++ DQ +A GY RA+SIETGTKLYISNLDYGVS +DIKELFAE+GDLKR VH
Sbjct: 63 DLYA-DQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAVH 121
Query: 587 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 766
YDRSGRSKGTAEVVFSRR DA++AV +YNNVQLDGKPMK+EIVGTNI TP
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVA-PARNGA 180
Query: 767 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 946
G+PRS Q GEK+S+DDLDADLEKY
Sbjct: 181 IGNFDGVPRSGQ-GRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKY 239
Query: 947 HASSMQIN 970
HA +MQ+N
Sbjct: 240 HAEAMQLN 247
>XP_014619530.1 PREDICTED: THO complex subunit 4A-like [Glycine max] KRH29829.1
hypothetical protein GLYMA_11G141500 [Glycine max]
KRH29830.1 hypothetical protein GLYMA_11G141500 [Glycine
max]
Length = 247
Score = 224 bits (572), Expect = 7e-65
Identities = 130/248 (52%), Positives = 156/248 (62%), Gaps = 3/248 (1%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS-KAPDSVWQH 409
+A+D SLDD+I +NKK NR++ R APY++ KAP++ WQH
Sbjct: 3 AAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATWQH 62
Query: 410 DMFSSDQAMANQGY-VDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 586
D+++ DQ +A GY RA+SIETGTKLYISNLDYGVS +DIKELFAE+GDLKR VH
Sbjct: 63 DLYA-DQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAVH 121
Query: 587 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 766
YDRSGRSKGTAEVVFSRR DA++AV +YNNVQLDGKPMK+EIVGTNI TP
Sbjct: 122 YDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVA-PARNGA 180
Query: 767 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 946
G+PRS Q GEK+S+DDLDADLEKY
Sbjct: 181 IGNFDGVPRSGQ-GRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKY 239
Query: 947 HASSMQIN 970
HA +MQ+N
Sbjct: 240 HAEAMQLN 247
>XP_015058964.1 PREDICTED: THO complex subunit 4A [Solanum pennellii]
Length = 251
Score = 223 bits (569), Expect = 2e-64
Identities = 135/251 (53%), Positives = 151/251 (60%), Gaps = 6/251 (2%)
Frame = +2
Query: 236 SALDKSLDDLINDNK-----KXXXXXXXXXXXXXXXXXXXXNNRSSYRPAPYS-SKAPDS 397
+ALD +LDDLI NK K NRS+ R APYS +KAP +
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGRGAASTSSAGPSRRVPNRSANRAAPYSIAKAPQA 63
Query: 398 VWQHDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRS 577
W HDMF +DQA+A G RASSIETGTKLYISNLDYGVS EDIKELF+EIGDLKR
Sbjct: 64 SWNHDMFEADQAVAF-GQAG-GRASSIETGTKLYISNLDYGVSNEDIKELFSEIGDLKRY 121
Query: 578 VVHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXX 757
VHYDRSGRSKGTAEVVFSRRQDAL+ V ++NNVQLDGKPMK+EIVGTNIVTP A
Sbjct: 122 AVHYDRSGRSKGTAEVVFSRRQDALAGVKRFNNVQLDGKPMKIEIVGTNIVTPTAPFSNG 181
Query: 758 XXXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADL 937
G PRS Q GEK+S++DLDADL
Sbjct: 182 AFGFGDTNGAPRSGQ-VRGGGFGRSRGARGRDRGFRGGNRGWGRGGRGEKVSAEDLDADL 240
Query: 938 EKYHASSMQIN 970
KYH +MQ N
Sbjct: 241 MKYHTEAMQTN 251
>NP_001308426.1 RNA-binding (RRM/RBD/RNP motifs) family protein [Solanum
lycopersicum]
Length = 251
Score = 223 bits (569), Expect = 2e-64
Identities = 135/251 (53%), Positives = 151/251 (60%), Gaps = 6/251 (2%)
Frame = +2
Query: 236 SALDKSLDDLINDNK-----KXXXXXXXXXXXXXXXXXXXXNNRSSYRPAPYS-SKAPDS 397
+ALD +LDDLI NK K NRS+ R APYS +KAP +
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGRGAASTSSAGPSRRVPNRSANRAAPYSIAKAPQA 63
Query: 398 VWQHDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRS 577
W HDMF +DQA+A G RASSIETGTKLYISNLDYGVS EDIKELF+EIGDLKR
Sbjct: 64 SWNHDMFEADQAVAF-GQAG-GRASSIETGTKLYISNLDYGVSNEDIKELFSEIGDLKRY 121
Query: 578 VVHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXX 757
VHYDRSGRSKGTAEVVFSRRQDAL+ V ++NNVQLDGKPMK+EIVGTNIVTP A
Sbjct: 122 AVHYDRSGRSKGTAEVVFSRRQDALAGVKRFNNVQLDGKPMKIEIVGTNIVTPTAPFSNG 181
Query: 758 XXXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADL 937
G PRS Q GEK+S++DLDADL
Sbjct: 182 AFGFGDTNGAPRSGQ-VRGGGFGRSRGGRGRDRGFRGGNRGWGRGGRGEKVSAEDLDADL 240
Query: 938 EKYHASSMQIN 970
KYH +MQ N
Sbjct: 241 MKYHTEAMQTN 251
>XP_010260105.1 PREDICTED: THO complex subunit 4A [Nelumbo nucifera]
Length = 244
Score = 223 bits (567), Expect = 3e-64
Identities = 131/250 (52%), Positives = 153/250 (61%), Gaps = 5/250 (2%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS----KAPDSV 400
SALD +L+DLI +NKK NR + R APYS+ +APDS
Sbjct: 3 SALDMTLEDLIKNNKKSGGGNFRGRGRGSGPGPSRRFPNRGANRTAPYSTGKPVQAPDSA 62
Query: 401 WQHDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSV 580
WQHDMF+ DQA A R S+IETGTKLYISNL+YGVS EDIKELF+E+GDLKR
Sbjct: 63 WQHDMFT-DQAAAYPAQAART--SAIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYT 119
Query: 581 VHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXX 760
VHYDRSGRSKGTAEVVFSRR DAL+AV +YNNVQLDGKPMK+E+VGTNI TP A
Sbjct: 120 VHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEVVGTNIATPVAVPPAAN 179
Query: 761 XXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLE 940
G+PRS Q GE++S++DLDADLE
Sbjct: 180 GGFGNPNGVPRSGQ-----GRGGAMGRSRGGGGRGFGRGRGRRRDRGEQISAEDLDADLE 234
Query: 941 KYHASSMQIN 970
KYH+ +MQIN
Sbjct: 235 KYHSEAMQIN 244
>XP_015158895.1 PREDICTED: THO complex subunit 4A-like [Solanum tuberosum]
Length = 251
Score = 222 bits (565), Expect = 8e-64
Identities = 133/251 (52%), Positives = 152/251 (60%), Gaps = 6/251 (2%)
Frame = +2
Query: 236 SALDKSLDDLINDNK-----KXXXXXXXXXXXXXXXXXXXXNNRSSYRPAPYSS-KAPDS 397
+ALD +LDDLI NK K NRS+ R APYS+ KAP++
Sbjct: 4 AALDMTLDDLIKKNKTGTGGKPRGRGCGAASTSSAGPSRRFPNRSANRAAPYSTAKAPEA 63
Query: 398 VWQHDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRS 577
W HDMF++DQA+A G RASSIETGTKLYISNLDYGVS+EDIKELF+EIGDLKR
Sbjct: 64 SWNHDMFAADQAVAF-GQAG-GRASSIETGTKLYISNLDYGVSKEDIKELFSEIGDLKRY 121
Query: 578 VVHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXX 757
VHYDRSGRSKGT EVVFSRRQD L+ V ++NNVQLDGKPMK+EIVGTNIVTP A
Sbjct: 122 AVHYDRSGRSKGTTEVVFSRRQDTLAGVKRFNNVQLDGKPMKIEIVGTNIVTPTAPFSNG 181
Query: 758 XXXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADL 937
G PRS Q GEK+S++DLDADL
Sbjct: 182 AFGFGDTNGAPRSGQ-VRGGGFGRSRGARGRGRGFRGGNRGWGRGGRGEKVSAEDLDADL 240
Query: 938 EKYHASSMQIN 970
KYH +MQ N
Sbjct: 241 MKYHTEAMQTN 251
>XP_002531375.1 PREDICTED: THO complex subunit 4A [Ricinus communis] EEF31023.1 RNA
and export factor binding protein, putative [Ricinus
communis]
Length = 247
Score = 220 bits (561), Expect = 3e-63
Identities = 132/250 (52%), Positives = 151/250 (60%), Gaps = 5/250 (2%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXX-NNRSSYRPAPYSS-KAPDSVWQH 409
SALD SLDD+I NKK NNR + R APY++ KAP+S WQH
Sbjct: 3 SALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTWQH 62
Query: 410 DMFSSDQAMA---NQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSV 580
DMF+ M QG +RAS IETGTKLYISNL+YGVS EDIKELF+E+GDLKR
Sbjct: 63 DMFTDQGGMGMFQGQGG-GGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRYS 121
Query: 581 VHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXX 760
+HYDRSGRSKGTAEVVFSRR DAL+AV +YNNVQLDGKPMK+EIVGTNI TPAA
Sbjct: 122 IHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAA-TPAAN 180
Query: 761 XXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLE 940
G PR Q GEK+S++DLDADLE
Sbjct: 181 GNFGNSNGAPRGGQ---GRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLE 237
Query: 941 KYHASSMQIN 970
KYH+ +MQ N
Sbjct: 238 KYHSEAMQTN 247
>XP_010253243.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Nelumbo
nucifera]
Length = 241
Score = 220 bits (560), Expect = 3e-63
Identities = 128/250 (51%), Positives = 151/250 (60%), Gaps = 5/250 (2%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXN-NRSSYRPAPYSS----KAPDSV 400
S+LD SLDDLI +NKK NR + R PYS +APDS
Sbjct: 3 SSLDMSLDDLIKNNKKSGGSNFRGRGRGSGPGPARRAPNRGANRTTPYSMGKSVQAPDSA 62
Query: 401 WQHDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSV 580
WQHDMF+ DQA A +RAS+IETGTKLYISNLDYGVS +DIKELF+E+GDLKR
Sbjct: 63 WQHDMFT-DQAAAYPAQA--SRASAIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRYT 119
Query: 581 VHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXX 760
+HYDRSGRSKGTAEVVFSRR DAL+AV +YNNVQLDGKPMK+EIVGTN+ TPA
Sbjct: 120 IHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEIVGTNVTTPAVAPAATN 179
Query: 761 XXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLE 940
+PRS Q E+++++DLDADLE
Sbjct: 180 GKFGNPNSVPRSGQ--------GRGGAIGRPRGRGFGRGRGRGRGRAEQITAEDLDADLE 231
Query: 941 KYHASSMQIN 970
KYH+ +MQIN
Sbjct: 232 KYHSEAMQIN 241
>XP_010043580.1 PREDICTED: THO complex subunit 4A [Eucalyptus grandis] KCW85598.1
hypothetical protein EUGRSUZ_B02389 [Eucalyptus grandis]
KCW85599.1 hypothetical protein EUGRSUZ_B02389
[Eucalyptus grandis] KCW85600.1 hypothetical protein
EUGRSUZ_B02389 [Eucalyptus grandis]
Length = 252
Score = 219 bits (557), Expect = 1e-62
Identities = 129/253 (50%), Positives = 151/253 (59%), Gaps = 10/253 (3%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXN---------NRSSYRPAPYSS-K 385
SALD SLDD+I NKK + NR++ R PY++ K
Sbjct: 3 SALDMSLDDIIKSNKKSGSGAPRSGGGRGRGGGGAASGPGPTRRPPNRAAARANPYAAPK 62
Query: 386 APDSVWQHDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGD 565
AP++ WQHDMF +DQ + QG RAS+IETGTKLYISNLDYGVS EDIKELF+E+GD
Sbjct: 63 APETTWQHDMF-ADQGLTFQG--QPGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGD 119
Query: 566 LKRSVVHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAG 745
LKR VHYDRSGRSKGTAEVVFSRR DAL+AV +YNNVQLDGKPMK+EIVGTNI TPAA
Sbjct: 120 LKRHAVHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAAT 179
Query: 746 XXXXXXXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDL 925
G PR Q EK+S++DL
Sbjct: 180 PVISNGSFGNLNGFPRGGQ-ARGGAIGRPRGGASGSGRRPAARGRGRGRGRSEKVSAEDL 238
Query: 926 DADLEKYHASSMQ 964
DADLEKYH+ +M+
Sbjct: 239 DADLEKYHSEAME 251
>OMO97180.1 hypothetical protein COLO4_14838 [Corchorus olitorius]
Length = 240
Score = 218 bits (554), Expect = 2e-62
Identities = 124/245 (50%), Positives = 142/245 (57%), Gaps = 2/245 (0%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXNNRSSYRPAPYSS--KAPDSVWQH 409
S LD SLDDLI NKK NR+ R APYS +APD+ WQH
Sbjct: 3 SPLDMSLDDLIKSNKKPGPNRTRPPRGSGPGPSRRFTNRAGNRTAPYSKPVQAPDAAWQH 62
Query: 410 DMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVHY 589
DMF D A + RASS+ETGTK+YISNLD+GVS EDIKELF E+GD+KR +HY
Sbjct: 63 DMFVDDGAGFSAA---PGRASSLETGTKIYISNLDFGVSTEDIKELFQEVGDVKRYAIHY 119
Query: 590 DRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXXX 769
DRSGRSKGTAEVVFSRR DA +A +YN VQLDGKPMKVEIVGTN+ TP AG
Sbjct: 120 DRSGRSKGTAEVVFSRRSDAAAAFKRYNGVQLDGKPMKVEIVGTNVATPGAGPPATNGKF 179
Query: 770 XXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKYH 949
G+PRS Q GEK+S++DLDADLE YH
Sbjct: 180 ANQNGVPRSGQ------GRGGFSGRSRGRGRGGRRGRGRGRGQGEKVSAEDLDADLENYH 233
Query: 950 ASSMQ 964
+MQ
Sbjct: 234 KEAMQ 238
>XP_016556239.1 PREDICTED: THO complex subunit 4A [Capsicum annuum]
Length = 253
Score = 218 bits (555), Expect = 3e-62
Identities = 127/250 (50%), Positives = 151/250 (60%), Gaps = 7/250 (2%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXN------NRSSYRPAPYSS-KAPD 394
+ALD +LDDLI NK NRS+ R APYS+ KAP+
Sbjct: 4 AALDMTLDDLIKKNKTAAGGKPRGRGRGAASATSGGGPSRRFPNRSANRAAPYSTAKAPE 63
Query: 395 SVWQHDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKR 574
+ W ++MF++DQA+ G +SSIETGTKLYISNLDYGVS EDIKELF+EIGDLKR
Sbjct: 64 AAWNYNMFAADQAVPF-GQGGGRASSSIETGTKLYISNLDYGVSNEDIKELFSEIGDLKR 122
Query: 575 SVVHYDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXX 754
+HYDRSGRSKGTAEVVFSRRQDA++ V ++NNVQLDGKPMK+EIVGTNIVTP A
Sbjct: 123 YAIHYDRSGRSKGTAEVVFSRRQDAITGVKRFNNVQLDGKPMKIEIVGTNIVTPTAPFPN 182
Query: 755 XXXXXXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDAD 934
G+PRS Q HGEKLS++DLDAD
Sbjct: 183 GAFGFGDTNGVPRSGQ-ARGGGFGRSRGGRGRGRGFRGGNRGRGRGGHGEKLSAEDLDAD 241
Query: 935 LEKYHASSMQ 964
L KYH +M+
Sbjct: 242 LMKYHTEAME 251
>XP_002284215.1 PREDICTED: THO complex subunit 4A [Vitis vinifera] CBI16171.3
unnamed protein product, partial [Vitis vinifera]
Length = 243
Score = 218 bits (554), Expect = 3e-62
Identities = 131/248 (52%), Positives = 151/248 (60%), Gaps = 3/248 (1%)
Frame = +2
Query: 236 SALDKSLDDLINDNKKXXXXXXXXXXXXXXXXXXXXN--NRSSYRPAPYS-SKAPDSVWQ 406
+ALD SLDDLI +NK+ NR + R PYS SKAP++ WQ
Sbjct: 3 NALDMSLDDLIKNNKRSGGGGNARGRGRGSGPGPARRLPNRGANRITPYSVSKAPETTWQ 62
Query: 407 HDMFSSDQAMANQGYVDRNRASSIETGTKLYISNLDYGVSQEDIKELFAEIGDLKRSVVH 586
HDMF+ DQA A R S+IETGTKLYISNLDYGVS EDIKELF+E+GDLKR +H
Sbjct: 63 HDMFA-DQAAAYPAQA--GRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIH 119
Query: 587 YDRSGRSKGTAEVVFSRRQDALSAVVKYNNVQLDGKPMKVEIVGTNIVTPAAGXXXXXXX 766
YDRSGRSKGTAEVVFSRR DA++AV +YNNVQLDGKPMK+EIVGTNI TPAA
Sbjct: 120 YDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGT 179
Query: 767 XXXXXGIPRSNQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGEKLSSDDLDADLEKY 946
G RS Q GEK+S++DLDADLEKY
Sbjct: 180 FGNSNGGLRSAQ----GRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKY 235
Query: 947 HASSMQIN 970
H+ +MQIN
Sbjct: 236 HSEAMQIN 243