BLASTX nr result
ID: Angelica23_contig00045979
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00045979
(432 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi... 128 6e-28
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera] 128 6e-28
gb|ABK28160.1| unknown [Arabidopsis thaliana] 123 2e-26
gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arab... 123 2e-26
ref|NP_178378.1| pentatricopeptide repeat-containing protein [Ar... 123 2e-26
>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
protein product [Vitis vinifera]
Length = 617
Score = 128 bits (321), Expect = 6e-28
Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYS 181
A F +VG+ RP+SV+IAS+L C V+ QVHC +K GVE D++V T++VTMYS
Sbjct: 118 ALGAFKQVGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYS 177
Query: 182 KCRELVLASKAFEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQE-PNSVTFL 358
C ELVLA K F+QI +K++V YNA F+++ S E PNSVT +
Sbjct: 178 NCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLV 237
Query: 359 SVISACSDTRHVHFGRQIHGFLVK 430
S++SACS ++ FGRQIHG +VK
Sbjct: 238 SILSACSKLLYIRFGRQIHGLVVK 261
Score = 61.6 bits (148), Expect = 6e-08
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDV---KEGCQVHCWGVKTGVEVDVFVGTSLVT 172
AF+ F ++ + SI SLL C + + G ++H ++T ++ D F+ T+L+
Sbjct: 354 AFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALID 413
Query: 173 MYSKCRELVLASKAF--EQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNS 346
MY KC LA + F QI +NA F +++ +PNS
Sbjct: 414 MYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNS 473
Query: 347 VTFLSVISACSDTRHVHFGRQI 412
T +S++S CS T + G Q+
Sbjct: 474 ATLVSILSVCSHTGEIDRGWQL 495
Score = 55.1 bits (131), Expect = 6e-06
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = +2
Query: 44 PDSVSIASLLSVCRD---VKEGCQVHCWGVKTGVEVDVFVGTSLVTMYSKCRELVLASKA 214
P+SV++ S+LS C ++ G Q+H VK + D VGT+LV MYSKC A
Sbjct: 231 PNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGI 290
Query: 215 F-EQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNSVTFLSVISACSDTRH 391
F E G ++LV +N+ F ++ EP+S T+ ++IS S
Sbjct: 291 FIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQ 350
Query: 392 V 394
V
Sbjct: 351 V 351
>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 128 bits (321), Expect = 6e-28
Identities = 67/144 (46%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYS 181
A F +VG+ RP+SV+IAS+L C V+ QVHC +K GVE D++V T++VTMYS
Sbjct: 178 ALGAFKQVGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYS 237
Query: 182 KCRELVLASKAFEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQE-PNSVTFL 358
C ELVLA K F+QI +K++V YNA F+++ S E PNSVT +
Sbjct: 238 NCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLV 297
Query: 359 SVISACSDTRHVHFGRQIHGFLVK 430
S++SACS ++ FGRQIHG +VK
Sbjct: 298 SILSACSKLLYIRFGRQIHGLVVK 321
Score = 61.6 bits (148), Expect = 6e-08
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDV---KEGCQVHCWGVKTGVEVDVFVGTSLVT 172
AF+ F ++ + SI SLL C + + G ++H ++T ++ D F+ T+L+
Sbjct: 414 AFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALID 473
Query: 173 MYSKCRELVLASKAF--EQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNS 346
MY KC LA + F QI +NA F +++ +PNS
Sbjct: 474 MYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNS 533
Query: 347 VTFLSVISACSDTRHVHFGRQI 412
T +S++S CS T + G Q+
Sbjct: 534 ATLVSILSVCSHTGEIDRGWQL 555
Score = 55.1 bits (131), Expect = 6e-06
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = +2
Query: 44 PDSVSIASLLSVCRD---VKEGCQVHCWGVKTGVEVDVFVGTSLVTMYSKCRELVLASKA 214
P+SV++ S+LS C ++ G Q+H VK + D VGT+LV MYSKC A
Sbjct: 291 PNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGI 350
Query: 215 F-EQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNSVTFLSVISACSDTRH 391
F E G ++LV +N+ F ++ EP+S T+ ++IS S
Sbjct: 351 FIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQ 410
Query: 392 V 394
V
Sbjct: 411 V 411
>gb|ABK28160.1| unknown [Arabidopsis thaliana]
Length = 614
Score = 123 bits (308), Expect = 2e-26
Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYS 181
AFR+FG+ V +SV++AS+L C D++ G Q+HC +K+G E++V+VGTSLV+MYS
Sbjct: 116 AFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYS 175
Query: 182 KCRELVLASKAFEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRR-SVQEPNSVTFL 358
+C E VLA++ FE++ KS+V YNA F +R+ S +EPN VTF+
Sbjct: 176 RCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFV 235
Query: 359 SVISACSDTRHVHFGRQIHGFLVK 430
+ I+AC+ ++ +GRQ+HG ++K
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMK 259
Score = 63.5 bits (153), Expect = 2e-08
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDV---KEGCQVHCWGVKTGVEVDVFVGTSLVT 172
AF+ F + + P + SLLS C D+ K G ++H +K E D+FV TSL+
Sbjct: 352 AFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLID 411
Query: 173 MYSKCRELVLASKAFEQI--GEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNS 346
MY KC A + F++ K V +N F +R EP+
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471
Query: 347 VTFLSVISACSDTRHVHFGRQI 412
TF +V+SACS +V G QI
Sbjct: 472 ATFTAVLSACSHCGNVEKGSQI 493
Score = 62.8 bits (151), Expect = 3e-08
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +2
Query: 44 PDSVSIASLLSVCR---DVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYSKCRELVLASKA 214
P+ + LL C DV +G +H VKTG VDVF T+LV+MY K +++ A K
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 215 FEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNSVTFLSVISACSDTRHV 394
+++ E+ + NA F + R S NSVT SV+ C D +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 395 HFGRQIHGFLVK 430
G Q+H +K
Sbjct: 146 EGGMQLHCLAMK 157
>gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 123 bits (308), Expect = 2e-26
Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYS 181
AFR+FG+ V +SV++AS+L C D++ G Q+HC +K+G E++V+VGTSLV+MYS
Sbjct: 116 AFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYS 175
Query: 182 KCRELVLASKAFEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRR-SVQEPNSVTFL 358
+C E VLA++ FE++ KS+V YNA F +R+ S +EPN VTF+
Sbjct: 176 RCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFV 235
Query: 359 SVISACSDTRHVHFGRQIHGFLVK 430
+ I+AC+ ++ +GRQ+HG ++K
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMK 259
Score = 63.5 bits (153), Expect = 2e-08
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDV---KEGCQVHCWGVKTGVEVDVFVGTSLVT 172
AF+ F + + P + SLLS C D+ K G ++H +K E D+FV TSL+
Sbjct: 352 AFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLID 411
Query: 173 MYSKCRELVLASKAFEQIGEK--SLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNS 346
MY KC A + F++ K V +N F +R EP+
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPRDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471
Query: 347 VTFLSVISACSDTRHVHFGRQI 412
TF +V+SACS +V G QI
Sbjct: 472 ATFTAVLSACSHCGNVEKGSQI 493
Score = 62.8 bits (151), Expect = 3e-08
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +2
Query: 44 PDSVSIASLLSVCR---DVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYSKCRELVLASKA 214
P+ + LL C DV +G +H VKTG VDVF T+LV+MY K +++ A K
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 215 FEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNSVTFLSVISACSDTRHV 394
+++ E+ + NA F + R S NSVT SV+ C D +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 395 HFGRQIHGFLVK 430
G Q+H +K
Sbjct: 146 EGGMQLHCLAMK 157
>ref|NP_178378.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546778|sp|Q1PFA6.2|PP144_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02750 gi|2947066|gb|AAC05347.1| hypothetical protein
[Arabidopsis thaliana] gi|330250526|gb|AEC05620.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 613
Score = 123 bits (308), Expect = 2e-26
Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYS 181
AFR+FG+ V +SV++AS+L C D++ G Q+HC +K+G E++V+VGTSLV+MYS
Sbjct: 116 AFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYS 175
Query: 182 KCRELVLASKAFEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRR-SVQEPNSVTFL 358
+C E VLA++ FE++ KS+V YNA F +R+ S +EPN VTF+
Sbjct: 176 RCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFV 235
Query: 359 SVISACSDTRHVHFGRQIHGFLVK 430
+ I+AC+ ++ +GRQ+HG ++K
Sbjct: 236 NAITACASLLNLQYGRQLHGLVMK 259
Score = 63.5 bits (153), Expect = 2e-08
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Frame = +2
Query: 2 AFRIFGEVGVRRLRPDSVSIASLLSVCRDV---KEGCQVHCWGVKTGVEVDVFVGTSLVT 172
AF+ F + + P + SLLS C D+ K G ++H +K E D+FV TSL+
Sbjct: 352 AFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLID 411
Query: 173 MYSKCRELVLASKAFEQI--GEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNS 346
MY KC A + F++ K V +N F +R EP+
Sbjct: 412 MYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSL 471
Query: 347 VTFLSVISACSDTRHVHFGRQI 412
TF +V+SACS +V G QI
Sbjct: 472 ATFTAVLSACSHCGNVEKGSQI 493
Score = 62.8 bits (151), Expect = 3e-08
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +2
Query: 44 PDSVSIASLLSVCR---DVKEGCQVHCWGVKTGVEVDVFVGTSLVTMYSKCRELVLASKA 214
P+ + LL C DV +G +H VKTG VDVF T+LV+MY K +++ A K
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 215 FEQIGEKSLVCYNAXXXXXXXXXXXXXXXXXFREIRRSVQEPNSVTFLSVISACSDTRHV 394
+++ E+ + NA F + R S NSVT SV+ C D +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 395 HFGRQIHGFLVK 430
G Q+H +K
Sbjct: 146 EGGMQLHCLAMK 157