BLASTX nr result
ID: Angelica23_contig00042505
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00042505 (511 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Popu... 64 1e-08 ref|XP_002531123.1| chromodomain helicase DNA binding protein, p... 63 2e-08 emb|CBI24213.3| unnamed protein product [Vitis vinifera] 57 2e-06 ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding... 57 2e-06 ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M... 56 3e-06 >ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Populus trichocarpa] gi|222845563|gb|EEE83110.1| hypothetical protein POPTRDRAFT_172231 [Populus trichocarpa] Length = 419 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/56 (55%), Positives = 38/56 (67%) Frame = -2 Query: 477 RGNDIGKLDSWKRM*RDEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCR 310 RG+D GK ++WKR R EADI QP +R SN TR+SDPN+ LGAGP+D R Sbjct: 356 RGHDAGKFEAWKRRRRAEADIQPQFQPPLQRPISNGTRLSDPNSLGILGAGPADNR 411 >ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] gi|223529287|gb|EEF31257.1| chromodomain helicase DNA binding protein, putative [Ricinus communis] Length = 1718 Score = 63.2 bits (152), Expect = 2e-08 Identities = 30/57 (52%), Positives = 39/57 (68%) Frame = -2 Query: 480 QRGNDIGKLDSWKRM*RDEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCR 310 Q+G+D GK ++WKR R EAD+ S VQP +R SN R++DPN+ LGA PSD R Sbjct: 1641 QKGHDNGKFEAWKRRKRAEADMQSQVQPPLQRPMSNGARVTDPNSLGILGAAPSDNR 1697 >emb|CBI24213.3| unnamed protein product [Vitis vinifera] Length = 1539 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Frame = -2 Query: 477 RGNDIGKLDSWKRM*R-DEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCRHSG 301 + +D GK ++WKR R D + +S QPL +R SN +R+ DPN+ LG+GP+D R G Sbjct: 1457 KSHDAGKFEAWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGPTDNRRFG 1516 Query: 300 IEK 292 EK Sbjct: 1517 NEK 1519 >ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis vinifera] Length = 1764 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Frame = -2 Query: 477 RGNDIGKLDSWKRM*R-DEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCRHSG 301 + +D GK ++WKR R D + +S QPL +R SN +R+ DPN+ LG+GP+D R G Sbjct: 1682 KSHDAGKFEAWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGPTDNRRFG 1741 Query: 300 IEK 292 EK Sbjct: 1742 NEK 1744 >ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|355518633|gb|AET00257.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] Length = 1739 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/54 (51%), Positives = 37/54 (68%) Frame = -2 Query: 471 NDIGKLDSWKRM*RDEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCR 310 N+ GK ++WKR R E++ + QP +RTSSN RI+DPN+ LGAGPSD R Sbjct: 1665 NNTGKSEAWKRRRRAESEDHFQGQPPPQRTSSNGIRITDPNSLGILGAGPSDKR 1718