BLASTX nr result

ID: Angelica23_contig00042505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00042505
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Popu...    64   1e-08
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...    63   2e-08
emb|CBI24213.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    57   2e-06
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...    56   3e-06

>ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Populus trichocarpa]
           gi|222845563|gb|EEE83110.1| hypothetical protein
           POPTRDRAFT_172231 [Populus trichocarpa]
          Length = 419

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = -2

Query: 477 RGNDIGKLDSWKRM*RDEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCR 310
           RG+D GK ++WKR  R EADI    QP  +R  SN TR+SDPN+   LGAGP+D R
Sbjct: 356 RGHDAGKFEAWKRRRRAEADIQPQFQPPLQRPISNGTRLSDPNSLGILGAGPADNR 411


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/57 (52%), Positives = 39/57 (68%)
 Frame = -2

Query: 480  QRGNDIGKLDSWKRM*RDEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCR 310
            Q+G+D GK ++WKR  R EAD+ S VQP  +R  SN  R++DPN+   LGA PSD R
Sbjct: 1641 QKGHDNGKFEAWKRRKRAEADMQSQVQPPLQRPMSNGARVTDPNSLGILGAAPSDNR 1697


>emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = -2

Query: 477  RGNDIGKLDSWKRM*R-DEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCRHSG 301
            + +D GK ++WKR  R D  + +S  QPL +R  SN +R+ DPN+   LG+GP+D R  G
Sbjct: 1457 KSHDAGKFEAWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGPTDNRRFG 1516

Query: 300  IEK 292
             EK
Sbjct: 1517 NEK 1519


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
            vinifera]
          Length = 1764

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = -2

Query: 477  RGNDIGKLDSWKRM*R-DEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCRHSG 301
            + +D GK ++WKR  R D  + +S  QPL +R  SN +R+ DPN+   LG+GP+D R  G
Sbjct: 1682 KSHDAGKFEAWKRRRRADNINTHSLTQPLPQRPMSNGSRLPDPNSLGILGSGPTDNRRFG 1741

Query: 300  IEK 292
             EK
Sbjct: 1742 NEK 1744


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = -2

Query: 471  NDIGKLDSWKRM*RDEADINSAVQPLHERTSSNATRISDPNTSKFLGAGPSDCR 310
            N+ GK ++WKR  R E++ +   QP  +RTSSN  RI+DPN+   LGAGPSD R
Sbjct: 1665 NNTGKSEAWKRRRRAESEDHFQGQPPPQRTSSNGIRITDPNSLGILGAGPSDKR 1718


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