BLASTX nr result

ID: Angelica23_contig00035313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00035313
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92556.1| unknown [Populus trichocarpa]                           46   1e-07
ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|2...    46   1e-07
ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    46   3e-07
emb|CBI33259.3| unnamed protein product [Vitis vinifera]               42   7e-07
ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    42   8e-07

>gb|ABK92556.1| unknown [Populus trichocarpa]
          Length = 619

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = +1

Query: 1   LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84
           LKHD+  SKK PAPHL DVP YLLD TT
Sbjct: 521 LKHDKVLSKKPPAPHLSDVPDYLLDATT 548



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +3

Query: 126 NNSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSKISLATE 239
           NNS RR+G +   R S+D LKSFSAEG +   K  +  E
Sbjct: 565 NNSGRRQGPKRNFRKSKDPLKSFSAEGPRRGRKGGMKRE 603


>ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|222853160|gb|EEE90707.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = +1

Query: 1   LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84
           LKHD+  SKK PAPHL DVP YLLD TT
Sbjct: 499 LKHDKVLSKKPPAPHLSDVPDYLLDATT 526



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +3

Query: 126 NNSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSKISLATE 239
           NNS RR+G +   R S+D LKSFSAEG +   K  +  E
Sbjct: 543 NNSGRRQGPKRNFRKSKDPLKSFSAEGPRRGRKGGMKRE 581


>ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus] gi|449508529|ref|XP_004163338.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 16-like [Cucumis
           sativus]
          Length = 596

 Score = 45.8 bits (107), Expect(2) = 3e-07
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +1

Query: 1   LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84
           LKHD+  SK  PAPHLRDVP YL+DP T
Sbjct: 498 LKHDKILSKNPPAPHLRDVPDYLVDPVT 525



 Score = 33.1 bits (74), Expect(2) = 3e-07
 Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = +3

Query: 132 SSRRKGSQEKSRS-RDSLKSFSAEGHKNSSK 221
           S RR+G + KSR+ +D LK+FSAEG K S +
Sbjct: 544 SGRRRGFKRKSRNDKDPLKTFSAEGPKRSRR 574


>emb|CBI33259.3| unnamed protein product [Vitis vinifera]
          Length = 8206

 Score = 42.4 bits (98), Expect(2) = 7e-07
 Identities = 20/28 (71%), Positives = 21/28 (75%)
 Frame = +1

Query: 1    LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84
            LKHD+  SKK    HLRDVP YLLDPTT
Sbjct: 8108 LKHDKVLSKKPIPTHLRDVPDYLLDPTT 8135



 Score = 35.4 bits (80), Expect(2) = 7e-07
 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 129  NSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSK 221
            N +RR+GS+ K R SRD LK+FSAE  K +SK
Sbjct: 8153 NPARRQGSRRKFRKSRDPLKTFSAEAPKKASK 8184


>ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis
           vinifera]
          Length = 545

 Score = 42.4 bits (98), Expect(2) = 8e-07
 Identities = 20/28 (71%), Positives = 21/28 (75%)
 Frame = +1

Query: 1   LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84
           LKHD+  SKK    HLRDVP YLLDPTT
Sbjct: 447 LKHDKVLSKKPIPTHLRDVPDYLLDPTT 474



 Score = 35.4 bits (80), Expect(2) = 8e-07
 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 129 NSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSK 221
           N +RR+GS+ K R SRD LK+FSAE  K +SK
Sbjct: 492 NPARRQGSRRKFRKSRDPLKTFSAEAPKKASK 523


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