BLASTX nr result
ID: Angelica23_contig00035313
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00035313 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK92556.1| unknown [Populus trichocarpa] 46 1e-07 ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|2... 46 1e-07 ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 46 3e-07 emb|CBI33259.3| unnamed protein product [Vitis vinifera] 42 7e-07 ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 42 8e-07 >gb|ABK92556.1| unknown [Populus trichocarpa] Length = 619 Score = 45.8 bits (107), Expect(2) = 1e-07 Identities = 21/28 (75%), Positives = 22/28 (78%) Frame = +1 Query: 1 LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84 LKHD+ SKK PAPHL DVP YLLD TT Sbjct: 521 LKHDKVLSKKPPAPHLSDVPDYLLDATT 548 Score = 34.7 bits (78), Expect(2) = 1e-07 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 126 NNSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSKISLATE 239 NNS RR+G + R S+D LKSFSAEG + K + E Sbjct: 565 NNSGRRQGPKRNFRKSKDPLKSFSAEGPRRGRKGGMKRE 603 >ref|XP_002310257.1| predicted protein [Populus trichocarpa] gi|222853160|gb|EEE90707.1| predicted protein [Populus trichocarpa] Length = 597 Score = 45.8 bits (107), Expect(2) = 1e-07 Identities = 21/28 (75%), Positives = 22/28 (78%) Frame = +1 Query: 1 LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84 LKHD+ SKK PAPHL DVP YLLD TT Sbjct: 499 LKHDKVLSKKPPAPHLSDVPDYLLDATT 526 Score = 34.7 bits (78), Expect(2) = 1e-07 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +3 Query: 126 NNSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSKISLATE 239 NNS RR+G + R S+D LKSFSAEG + K + E Sbjct: 543 NNSGRRQGPKRNFRKSKDPLKSFSAEGPRRGRKGGMKRE 581 >ref|XP_004143411.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis sativus] gi|449508529|ref|XP_004163338.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Cucumis sativus] Length = 596 Score = 45.8 bits (107), Expect(2) = 3e-07 Identities = 20/28 (71%), Positives = 22/28 (78%) Frame = +1 Query: 1 LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84 LKHD+ SK PAPHLRDVP YL+DP T Sbjct: 498 LKHDKILSKNPPAPHLRDVPDYLVDPVT 525 Score = 33.1 bits (74), Expect(2) = 3e-07 Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Frame = +3 Query: 132 SSRRKGSQEKSRS-RDSLKSFSAEGHKNSSK 221 S RR+G + KSR+ +D LK+FSAEG K S + Sbjct: 544 SGRRRGFKRKSRNDKDPLKTFSAEGPKRSRR 574 >emb|CBI33259.3| unnamed protein product [Vitis vinifera] Length = 8206 Score = 42.4 bits (98), Expect(2) = 7e-07 Identities = 20/28 (71%), Positives = 21/28 (75%) Frame = +1 Query: 1 LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84 LKHD+ SKK HLRDVP YLLDPTT Sbjct: 8108 LKHDKVLSKKPIPTHLRDVPDYLLDPTT 8135 Score = 35.4 bits (80), Expect(2) = 7e-07 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%) Frame = +3 Query: 129 NSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSK 221 N +RR+GS+ K R SRD LK+FSAE K +SK Sbjct: 8153 NPARRQGSRRKFRKSRDPLKTFSAEAPKKASK 8184 >ref|XP_002273641.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 16, partial [Vitis vinifera] Length = 545 Score = 42.4 bits (98), Expect(2) = 8e-07 Identities = 20/28 (71%), Positives = 21/28 (75%) Frame = +1 Query: 1 LKHDEPSSKKAPAPHLRDVPAYLLDPTT 84 LKHD+ SKK HLRDVP YLLDPTT Sbjct: 447 LKHDKVLSKKPIPTHLRDVPDYLLDPTT 474 Score = 35.4 bits (80), Expect(2) = 8e-07 Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%) Frame = +3 Query: 129 NSSRRKGSQEKSR-SRDSLKSFSAEGHKNSSK 221 N +RR+GS+ K R SRD LK+FSAE K +SK Sbjct: 492 NPARRQGSRRKFRKSRDPLKTFSAEAPKKASK 523