BLASTX nr result

ID: Angelica23_contig00033258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00033258
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL13083.1| putative translation-initiation factor 3 subunit ...    67   2e-09
ref|XP_002531588.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
emb|CBI29961.3| unnamed protein product [Vitis vinifera]               58   7e-07

>gb|AAL13083.1| putative translation-initiation factor 3 subunit [Prunus avium]
          Length = 934

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 48/122 (39%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
 Frame = +3

Query: 3    RIGGVGLAPLSTRGRDGQDYATTTGGGGGKWQDNML-LSQGRQXXXXXXXXXXXXXPFTP 179
            RIGG GL  L  R RD QDYAT T  GGG+WQDN L  +QGRQ                 
Sbjct: 814  RIGGGGL-DLPQRRRDNQDYATGTAAGGGRWQDNNLSFNQGRQGGGSGRAGYNTGGRSFN 872

Query: 180  XXXXXXXXXXXXXXXXXXXHSTRYQDSSYTGTGRS--YPNNSARGGQ-----MVSLNRGV 338
                                ++RYQD++Y G+GR+      +ARG Q     MVSL+RG+
Sbjct: 873  QNAGGGYSRDRAGQYRGSGQNSRYQDAAYAGSGRTGYQTGPAARGSQDTSTRMVSLHRGL 932

Query: 339  RA 344
            RA
Sbjct: 933  RA 934


>ref|XP_002531588.1| conserved hypothetical protein [Ricinus communis]
           gi|223528784|gb|EEF30791.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 49/122 (40%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
 Frame = +3

Query: 3   RIGGVGLAPLSTRGRDGQDYATTTGGGGGKWQDNMLLSQGRQXXXXXXXXXXXXXPFTPX 182
           RIGG GL  L  R +D QDYA+    GG KWQDNM  +QGRQ             P +  
Sbjct: 176 RIGG-GL-DLPMRRKDSQDYASMAAAGG-KWQDNMSFTQGRQGSGRSGYNVGSGRPPSVG 232

Query: 183 XXXXXXXXXXXXXXXXXXHSTRYQDSSYTGTGRS--YPNNSARGGQ------MVSLNRGV 338
                             +S RYQD +Y G+GRS     + ARG Q      MV+LNRGV
Sbjct: 233 HATGGGYSRGTGQSRGGGYS-RYQDGAYGGSGRSAYQTGSGARGSQMDASNRMVNLNRGV 291

Query: 339 RA 344
           RA
Sbjct: 292 RA 293


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 50/121 (41%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
 Frame = +3

Query: 3    RIGGVGLAPLSTRGRDGQDYATTTGGGGGKWQDNMLLSQGRQXXXXXXXXXXXXXPFTPX 182
            +IGG GL  L  R RDGQDYA     GG KWQDN   SQGRQ                  
Sbjct: 745  KIGGGGL-DLPLRRRDGQDYAGAASVGG-KWQDNFSFSQGRQ------------------ 784

Query: 183  XXXXXXXXXXXXXXXXXXHSTRYQDSSYTGTGRSYPNNSA-RGGQ------MVSLNRGVR 341
                               STRYQD++Y  T  +Y  +SA RG Q      MVSLNRGVR
Sbjct: 785  ----GGQSRGTGGYSGGYQSTRYQDAAYGRT--AYQTSSAVRGSQMDTSTRMVSLNRGVR 838

Query: 342  A 344
            A
Sbjct: 839  A 839


Top