BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026729
         (1349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   497   e-138
ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocar...   497   e-138
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   494   e-137
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   489   e-136
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   481   e-133

>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  497 bits (1279), Expect = e-138
 Identities = 248/389 (63%), Positives = 292/389 (75%), Gaps = 1/389 (0%)
 Frame = +1

Query: 184  EEESSCSAIMDGVITGIKFGLASRDEISTSSNSDCPISHASQLSNPFLGLPLESGKCESC 363
            EE  SCS+I+D  I GI+F LA+  EI  ++ SDCPI+HASQLSNPFLGLP+E GKCESC
Sbjct: 2    EEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCESC 61

Query: 364  GTAEAGECEGHFGYIELPTPIYHPSHVTEXXXXXXXXXXXXXXXXXXXXXXXXVGVAERV 543
            GT+E G+CEGHFGYIELP PIYHP+H+TE                        +G AER+
Sbjct: 62   GTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLLCLKCLKMKKTKN----IGFAERL 117

Query: 544  LSSCCEEASQVSISEEKTSDGACYLQLKLPSRSHPPNGFWHFLERYGFRYGDDHCRPLLP 723
            LSSCCE+ASQV+I E K +DGA YLQLK+PSR+     FW FLERYGFRYGD+  R LLP
Sbjct: 118  LSSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLLP 177

Query: 724  SEVMVILRKIPQESRKKLSGKGFFPQDGYILQYLPVPPNCLXXXXXXXXXXXXXXXXXXX 903
             EV  +L+KIP E+RKKL+G+G++PQDGYILQYLPVPPNCL                   
Sbjct: 178  CEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVS 237

Query: 904  XLKKVLKQADVIKSTRSGIQNFESTEVEANDLQVAVSQYLEVRGTAKASRDVDGRFGIKK 1083
             LKK+LKQ ++IK +RSG  NFES EVEANDLQ+AV QYL+VRGT KASR +D RFG+ K
Sbjct: 238  MLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNK 297

Query: 1084 EGNS-STKVWLEKMRTLFIRKGSGFSSRSIITGDPYKGVGEIGLPFEIAQRITFEEKVNQ 1260
            E N  STK WLEKMRTLFIRKGSGFSSRS+ITGD YK V EIG+PFE+AQRITFEE+V+ 
Sbjct: 298  ELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRITFEERVSV 357

Query: 1261 HNMTYLQKLVDQKLCLAYKDGSSTYSLRE 1347
            HN+ YLQ+LVD+KLCL Y+DGSS YSLRE
Sbjct: 358  HNIRYLQELVDKKLCLTYRDGSSAYSLRE 386


>ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222841357|gb|EEE78904.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 924

 Score =  497 bits (1279), Expect = e-138
 Identities = 250/388 (64%), Positives = 295/388 (76%), Gaps = 1/388 (0%)
 Frame = +1

Query: 187  EESSCSAIMDGVITGIKFGLASRDEISTSSNSDCPISHASQLSNPFLGLPLESGKCESCG 366
            +E+S S+I DG ITGI+FGLA++ EI T+S SDCPISH+SQL+NPFLGLPLE GKCESCG
Sbjct: 2    DENSQSSIFDGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCESCG 61

Query: 367  TAEAGECEGHFGYIELPTPIYHPSHVTEXXXXXXXXXXXXXXXXXXXXXXXXVGVAERVL 546
            T+E G+CEGHFG+I LP PIYHPSH++E                         GVAER+L
Sbjct: 62   TSEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAERLL 121

Query: 547  SSCCEEASQVSISEEKTSDGACYLQLKLPSRSHPPNGFWHFLERYGFRYGDDHCRPLLPS 726
            S CCEE +Q+SI E K +DGAC+L+LKLPSRS   +G W+FLERYGFRYGDD  RPLLP 
Sbjct: 122  S-CCEECAQISIREVKNTDGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFTRPLLPC 180

Query: 727  EVMVILRKIPQESRKKLSGKGFFPQDGYILQYLPVPPNCLXXXXXXXXXXXXXXXXXXXX 906
            EVM IL++IP E+RKKLSGKG+FPQDGYILQ LPVPPNCL                    
Sbjct: 181  EVMQILKRIPAETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSSDLSISM 240

Query: 907  LKKVLKQADVIKSTRSGIQNFESTEVEANDLQVAVSQYLEVRGTAKASRDVDGRFGIKKE 1086
            LKKVLKQA+VI+S+RSG  NF++ + EA  LQ  V QYL+VRGT K SRDVD R+G+KKE
Sbjct: 241  LKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYGVKKE 300

Query: 1087 GN-SSTKVWLEKMRTLFIRKGSGFSSRSIITGDPYKGVGEIGLPFEIAQRITFEEKVNQH 1263
             + S+TK WLEKMRTLFIRKGSGFSSRS+ITGD Y  V ++G+P+EIAQRITFEE+V+ H
Sbjct: 301  SSESTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRITFEERVSVH 360

Query: 1264 NMTYLQKLVDQKLCLAYKDGSSTYSLRE 1347
            NM YLQ+LVD KLCL YKDGSSTYSLRE
Sbjct: 361  NMRYLQELVDNKLCLTYKDGSSTYSLRE 388


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 991

 Score =  494 bits (1273), Expect = e-137
 Identities = 254/390 (65%), Positives = 297/390 (76%), Gaps = 1/390 (0%)
 Frame = +1

Query: 181  KEEESSCSAIMDGVITGIKFGLASRDEISTSSNSDCPISHASQLSNPFLGLPLESGKCES 360
            +++E++ S+ ++G + GIKFGLA+  EIS +S SDCPISH+SQL+NPFLGLPLE GKCES
Sbjct: 2    EDKENTQSSFLEGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCES 61

Query: 361  CGTAEAGECEGHFGYIELPTPIYHPSHVTEXXXXXXXXXXXXXXXXXXXXXXXXVGVAER 540
            CGT+E G+CEGHFGYIELP PIYHPSHV+E                         GVAER
Sbjct: 62   CGTSEPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKLKTNKIKSS--GVAER 119

Query: 541  VLSSCCEEASQVSISEEKTSDGACYLQLKLPSRSHPPNGFWHFLERYGFRYGDDHCRPLL 720
             L SCCEEA+Q+SI E KT+DGA  LQLKLPSR    +GFW+FLERYGFRYGDD  R LL
Sbjct: 120  -LFSCCEEAAQISIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDDITRTLL 178

Query: 721  PSEVMVILRKIPQESRKKLSGKGFFPQDGYILQYLPVPPNCLXXXXXXXXXXXXXXXXXX 900
            P EV+ +LR+IPQ++RKKL+ KG+FPQDGYI++Y+PVPPNCL                  
Sbjct: 179  PCEVLEMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSI 238

Query: 901  XXLKKVLKQADVIKSTRSGIQNFESTEVEANDLQVAVSQYLEVRGTAKASRDVDGRFGIK 1080
              LKKVLKQ ++IKS+RSG  NFES EVEA DLQ AV QYL+VRGTAK++RDV  RFG+ 
Sbjct: 239  SMLKKVLKQVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVH 298

Query: 1081 KEGN-SSTKVWLEKMRTLFIRKGSGFSSRSIITGDPYKGVGEIGLPFEIAQRITFEEKVN 1257
            KE N SSTK WLEKMRTLFIRKGSGFSSRS+ITGD YK V EIG+P EIAQRITFEE+VN
Sbjct: 299  KESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRITFEERVN 358

Query: 1258 QHNMTYLQKLVDQKLCLAYKDGSSTYSLRE 1347
             HNM YLQ+LVD KLCL Y+DGSSTYSLRE
Sbjct: 359  AHNMQYLQELVDNKLCLTYRDGSSTYSLRE 388


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  489 bits (1259), Expect = e-136
 Identities = 246/387 (63%), Positives = 289/387 (74%), Gaps = 1/387 (0%)
 Frame = +1

Query: 190  ESSCSAIMDGVITGIKFGLASRDEISTSSNSDCPISHASQLSNPFLGLPLESGKCESCGT 369
            E   S I+DG I+GI+FGLA+R EI  +S SDCPISHASQL+NPFLGLPLE GKCESCGT
Sbjct: 2    EEDSSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCGT 61

Query: 370  AEAGECEGHFGYIELPTPIYHPSHVTEXXXXXXXXXXXXXXXXXXXXXXXXVGVAERVLS 549
            AE G+CEGHFGYIELP PIYHP HV+E                         G+ E++L+
Sbjct: 62   AEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNN--GITEQLLA 119

Query: 550  SCCEEASQVSISEEKTSDGACYLQLKLPSRSHPPNGFWHFLERYGFRYGDDHCRPLLPSE 729
             CC+++ QVS+ E + ++GAC+L+LK+PSRS P +GFW FL RYG+RYG +  R LLPSE
Sbjct: 120  PCCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLSRILLPSE 179

Query: 730  VMVILRKIPQESRKKLSGKGFFPQDGYILQYLPVPPNCLXXXXXXXXXXXXXXXXXXXXL 909
            VM ILR+IP+++RKKL  KG+FPQDGYILQYLPVPPNCL                    L
Sbjct: 180  VMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSML 239

Query: 910  KKVLKQADVIKSTRSGIQNFESTEVEANDLQVAVSQYLEVRGTAKASRDVDGRFGIKKEG 1089
            KKVLKQ +VIK +RSG  NFES ++EAN+LQ ++ QYLEVRGTAK SR +D RFG  KE 
Sbjct: 240  KKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEP 299

Query: 1090 N-SSTKVWLEKMRTLFIRKGSGFSSRSIITGDPYKGVGEIGLPFEIAQRITFEEKVNQHN 1266
            N SSTK WLEKMRTLFIRKGSGFSSRS+ITGD YK V EIGLPFEIAQRITFEE+VN HN
Sbjct: 300  NESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHN 359

Query: 1267 MTYLQKLVDQKLCLAYKDGSSTYSLRE 1347
            M +LQ LVD+KLCL Y+DG STYSLRE
Sbjct: 360  MKHLQNLVDEKLCLTYRDGLSTYSLRE 386


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  481 bits (1237), Expect = e-133
 Identities = 246/415 (59%), Positives = 290/415 (69%), Gaps = 27/415 (6%)
 Frame = +1

Query: 184  EEESSCSAIMDGVITGIKFGLASRDEISTSSNSDCPISHASQLSNPFLGLPLESGKCESC 363
            EE  SCS+I+D  I GI+F LA+  EI  ++ SDCPI+HASQLSNPFLGLP+E GKCESC
Sbjct: 2    EEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCESC 61

Query: 364  GTAEAGECEG--------------------------HFGYIELPTPIYHPSHVTEXXXXX 465
            GT+E G+CEG                          HFGYIELP PIYHP+H+TE     
Sbjct: 62   GTSEPGKCEGIDFFFXIFNVLHNTTXQVVFIFHLSGHFGYIELPIPIYHPNHITELKKML 121

Query: 466  XXXXXXXXXXXXXXXXXXXVGVAERVLSSCCEEASQVSISEEKTSDGACYLQLKLPSRSH 645
                               +G AER+LSSCCE+ASQV+I E K +DGA YLQLK+PSR+ 
Sbjct: 122  SLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQLKVPSRTS 181

Query: 646  PPNGFWHFLERYGFRYGDDHCRPLLPSEVMVILRKIPQESRKKLSGKGFFPQDGYILQYL 825
                FW FLERYGFRYGD+  R LL   V  +L+KIP E+RKKL+G+G++PQDGYILQYL
Sbjct: 182  LQERFWDFLERYGFRYGDNFTRTLLSVMVKEMLKKIPNETRKKLAGRGYYPQDGYILQYL 241

Query: 826  PVPPNCLXXXXXXXXXXXXXXXXXXXXLKKVLKQADVIKSTRSGIQNFESTEVEANDLQV 1005
            PVPPNCL                    LKK+LKQ ++IK +RSG  NFES EVEANDLQ+
Sbjct: 242  PVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQL 301

Query: 1006 AVSQYLEVRGTAKASRDVDGRFGIKKEGNS-STKVWLEKMRTLFIRKGSGFSSRSIITGD 1182
            AV QYL+VRGT KASR +D RFG+ KE N  STK WLEKMRTLFIRKGSGFSSRS+ITGD
Sbjct: 302  AVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGD 361

Query: 1183 PYKGVGEIGLPFEIAQRITFEEKVNQHNMTYLQKLVDQKLCLAYKDGSSTYSLRE 1347
             YK V EIG+PFE+AQRITFEE+V+ HN+ YLQ+LVD+KLCL Y+DGSS YSLRE
Sbjct: 362  AYKLVNEIGVPFEVAQRITFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSLRE 416