BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026275
         (1937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi...   662   0.0  
ref|XP_002513855.1| pentatricopeptide repeat-containing protein,...   634   e-179
ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-175
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l...   618   e-174
ref|NP_193587.4| pentatricopeptide repeat-containing protein [Ar...   613   e-173

>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
            [Vitis vinifera]
          Length = 595

 Score =  662 bits (1709), Expect = 0.0
 Identities = 335/530 (63%), Positives = 403/530 (76%)
 Frame = -2

Query: 1747 YMDPTFLASQLQSCSTLKHVQILHXXXXXXXXXXXXXXXXXXXFNNLISAYIRFGELISA 1568
            +++   LA  LQSC T++ V+ +H                    NNLISAY RFG+L+ A
Sbjct: 63   HVNANLLAFWLQSCCTVREVRRVHAVVFKCLDNSVTYVN-----NNLISAYSRFGKLVEA 117

Query: 1567 RNLFDTMSKPNVVSWTALLNAYITFGLDYQAFSFLAAFFHSGILPNANTFVCILNLSTRT 1388
            R +FD M + NVVSWTA++N Y  +G D +A         +G+  N  TFVC+LNL ++ 
Sbjct: 118  RKVFDKMPERNVVSWTAVVNGYSRYGFDDEALRLFDDCIENGVRANGKTFVCVLNLCSKR 177

Query: 1387 LHFRLGQQIHACIVKQSSSNLIVDSAVVYFYAQCGDLGDMFRAFLWMKHGDVVSWTTVIS 1208
            L F LG+QIHACIVK +  NLIVDSA+V FYAQCGDL   F AF  M   DVV WTT+I+
Sbjct: 178  LDFELGRQIHACIVKDNWRNLIVDSALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMIT 237

Query: 1207 ACSQRQLGDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQALGFGRQLHGAVVKYICKN 1028
            ACSQ+  G +A S+F QM+    +PNEFT+CSVLKACG+E+AL FG+QLHGA++K + K 
Sbjct: 238  ACSQQGRGTEALSMFSQMMFNTSSPNEFTVCSVLKACGEEKALEFGKQLHGAIIKKMFKE 297

Query: 1027 DVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDARNGLGEDAIHLFRVMR 848
            DVFI TSLV MYAKCGEI  SR +F+GM KRNTV+WTS+IAG ARNG GE+AI LFRVM+
Sbjct: 298  DVFIGTSLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQGEEAISLFRVMK 357

Query: 847  RRKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIYLGSTLVWLYCKCGEYT 668
            RRKI AN LT+VSIL+ACG  R+LL GKE+HAQI+KN +  NIY+GSTLVW YCKC E+ 
Sbjct: 358  RRKIFANNLTVVSILRACGSTRNLLMGKEVHAQIMKNSMQSNIYIGSTLVWFYCKCEEHP 417

Query: 667  TAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEGVEPNSFTYSSALKACA 488
             A  VLQ +PL+DVVSWTA+ISG   LGHE EAL +LKEML EGVEPN FTYSSALKACA
Sbjct: 418  FASKVLQNMPLRDVVSWTAIISGYTSLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACA 477

Query: 487  KLKNIWQGRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEATQIFDSMPERNLISWKA 308
             L+ I QG+LIHSSVNKT ALS+VFVGS+LINMYAKCG VSEA Q+FDSMP+RNL+SWKA
Sbjct: 478  HLEAILQGKLIHSSVNKTLALSNVFVGSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKA 537

Query: 307  MILCYAKNGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTCGDFGWSKEPS 158
            MI+ YA+NG CGEALKLMYRMQAEGIEVDDY+L+TVL+ CGD  W+ E S
Sbjct: 538  MIVGYARNGLCGEALKLMYRMQAEGIEVDDYILTTVLSACGDVEWNMESS 587


>ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546941|gb|EEF48438.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  634 bits (1636), Expect = e-179
 Identities = 309/486 (63%), Positives = 384/486 (79%)
 Frame = -2

Query: 1615 NNLISAYIRFGELISARNLFDTMSKPNVVSWTALLNAYITFGLDYQAFSFLAAFFHSGIL 1436
            NNLIS Y R GELI AR +FD M +  VVSWTA++N Y++FGLD +A    +    +G+ 
Sbjct: 5    NNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIENGVT 64

Query: 1435 PNANTFVCILNLSTRTLHFRLGQQIHACIVKQSSSNLIVDSAVVYFYAQCGDLGDMFRAF 1256
             N  TFVCILN+ ++ L F LG+QIHAC+VK +  NLIVDSA+V FYAQCGDL   F AF
Sbjct: 65   ANNRTFVCILNVCSKRLDFELGRQIHACVVKGNWRNLIVDSAIVSFYAQCGDLESAFCAF 124

Query: 1255 LWMKHGDVVSWTTVISACSQRQLGDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQALG 1076
              ++  DVV WT+VISACSQ+  G++AF +F QML +GF PNEFT+C++LKACG+++AL 
Sbjct: 125  FQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALK 184

Query: 1075 FGRQLHGAVVKYICKNDVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDA 896
            FGRQLH A+VK + K+DVFI TSLVDMYAKCGE+  S+ +F+GM KRNTV+WTS+IAG A
Sbjct: 185  FGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYA 244

Query: 895  RNGLGEDAIHLFRVMRRRKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIY 716
            R GLGE+AI LFRVM+RRKI +N LT+VS+L+ACG +   LTG+E+HAQIIK+ I  N+Y
Sbjct: 245  RKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGIQSNVY 304

Query: 715  LGSTLVWLYCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEG 536
            LGSTLVW YCKCGE+  A  VLQ +  ++VVSWTAMISG   LG+E EAL +LKEM+ EG
Sbjct: 305  LGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKEMMDEG 364

Query: 535  VEPNSFTYSSALKACAKLKNIWQGRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEAT 356
            VEPN FTYSSALKACA L+++ QG+LIHS  NKTPA S+V+VGS+LI MY+KCG +S+A 
Sbjct: 365  VEPNEFTYSSALKACANLESVLQGKLIHSFANKTPASSNVYVGSALIYMYSKCGYLSDAI 424

Query: 355  QIFDSMPERNLISWKAMILCYAKNGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTCGDFG 176
            Q+FDSMPERNLISWK MIL YA+NG C EALKLMYRMQAEGIEVDDY+ ++V+ +CGD  
Sbjct: 425  QVFDSMPERNLISWKTMILSYARNGLCREALKLMYRMQAEGIEVDDYIYASVMGSCGDVD 484

Query: 175  WSKEPS 158
               E S
Sbjct: 485  RKAESS 490



 Score =  237 bits (604), Expect = 1e-59
 Identities = 124/382 (32%), Positives = 214/382 (56%)
 Frame = -2

Query: 1327 LIVDSAVVYFYAQCGDLGDMFRAFLWMKHGDVVSWTTVISACSQRQLGDQAFSLFLQMLN 1148
            + VD+ ++  YA+ G+L +  + F  M    VVSWT +I+      L D+A  LF +++ 
Sbjct: 1    MYVDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIE 60

Query: 1147 QGFTPNEFTMCSVLKACGDEQALGFGRQLHGAVVKYICKNDVFIETSLVDMYAKCGEIAH 968
             G T N  T   +L  C        GRQ+H  VVK   +N + +++++V  YA+CG++  
Sbjct: 61   NGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKGNWRN-LIVDSAIVSFYAQCGDLES 119

Query: 967  SRTIFNGMTKRNTVSWTSMIAGDARNGLGEDAIHLFRVMRRRKISANKLTMVSILKACGL 788
            +   F  + +++ V WTS+I+  ++ G GE+A  +F  M       N+ T+ +ILKACG 
Sbjct: 120  AFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGE 179

Query: 787  VRDLLTGKEMHAQIIKNCIHGNIYLGSTLVWLYCKCGEYTTAYNVLQGLPLKDVVSWTAM 608
             + L  G+++H  I+K     ++++G++LV +Y KCGE   +  V  G+  ++ V+WT++
Sbjct: 180  KKALKFGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSI 239

Query: 607  ISGCARLGHEHEALGYLKEMLGEGVEPNSFTYSSALKACAKLKNIWQGRLIHSSVNKTPA 428
            I+G AR G   EA+   + M    +  N+ T  S L+AC  +     GR +H+ + K+  
Sbjct: 240  IAGYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASLTGREVHAQIIKSGI 299

Query: 427  LSDVFVGSSLINMYAKCGCVSEATQIFDSMPERNLISWKAMILCYAKNGFCGEALKLMYR 248
             S+V++GS+L+  Y KCG  + A+++   M  RN++SW AMI  Y   G+  EAL+ +  
Sbjct: 300  QSNVYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGYEFEALEFLKE 359

Query: 247  MQAEGIEVDDYVLSTVLTTCGD 182
            M  EG+E +++  S+ L  C +
Sbjct: 360  MMDEGVEPNEFTYSSALKACAN 381



 Score =  200 bits (508), Expect = 1e-48
 Identities = 102/285 (35%), Positives = 168/285 (58%)
 Frame = -2

Query: 1024 VFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDARNGLGEDAIHLFRVMRR 845
            ++++ +L+ +YA+ GE+  +R +F+ M +R  VSWT+MI G    GL ++A+ LF  +  
Sbjct: 1    MYVDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIE 60

Query: 844  RKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIYLGSTLVWLYCKCGEYTT 665
              ++AN  T V IL  C    D   G+++HA ++K     N+ + S +V  Y +CG+  +
Sbjct: 61   NGVTANNRTFVCILNVCSKRLDFELGRQIHACVVKGNWR-NLIVDSAIVSFYAQCGDLES 119

Query: 664  AYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEGVEPNSFTYSSALKACAK 485
            A+     +  KDVV WT++IS C++ G   EA     +MLGEG  PN FT  + LKAC +
Sbjct: 120  AFCAFFQVREKDVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGE 179

Query: 484  LKNIWQGRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEATQIFDSMPERNLISWKAM 305
             K +  GR +H ++ K     DVF+G+SL++MYAKCG + ++ ++FD M +RN ++W ++
Sbjct: 180  KKALKFGRQLHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSI 239

Query: 304  ILCYAKNGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTCGDFGWS 170
            I  YA+ G   EA++L   M+   I  ++  + +VL  CG    S
Sbjct: 240  IAGYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISAS 284


>ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
            [Cucumis sativus] gi|449490224|ref|XP_004158542.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g18520-like [Cucumis sativus]
          Length = 619

 Score =  620 bits (1599), Expect = e-175
 Identities = 299/478 (62%), Positives = 372/478 (77%)
 Frame = -2

Query: 1615 NNLISAYIRFGELISARNLFDTMSKPNVVSWTALLNAYITFGLDYQAFSFLAAFFHSGIL 1436
            NNL+S+Y+R G L+ AR +FD M   +VV+WTA++N YI   L  +A +  +    SG+L
Sbjct: 126  NNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGVL 185

Query: 1435 PNANTFVCILNLSTRTLHFRLGQQIHACIVKQSSSNLIVDSAVVYFYAQCGDLGDMFRAF 1256
             N   FVCILNL  + L F LG+QIH  IVK +  NLIVDSA++YFYAQC D+   F AF
Sbjct: 186  ANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNRGNLIVDSAIIYFYAQCKDISSAFVAF 245

Query: 1255 LWMKHGDVVSWTTVISACSQRQLGDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQALG 1076
              M+  DVV WT++I++CSQ+ LG +A S+F  ML+  F PNEF++CSVLKACG+E+ L 
Sbjct: 246  ERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEERELK 305

Query: 1075 FGRQLHGAVVKYICKNDVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDA 896
             GRQLHG ++K I KNDVF+ TSLVDMYAKCG +A SR +F+GM  RNTV+WTS+IAG A
Sbjct: 306  IGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYA 365

Query: 895  RNGLGEDAIHLFRVMRRRKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIY 716
            R GLGE+A++LFR+M+R++I AN LT+VSIL+ACG +   LTG+E+HAQI+KN    NI+
Sbjct: 366  REGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIH 425

Query: 715  LGSTLVWLYCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEG 536
            +GSTLVW YCKC     A  VLQ +PL+DVVSWTA+ISGCA LGHE EAL +LK M+ EG
Sbjct: 426  IGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEG 485

Query: 535  VEPNSFTYSSALKACAKLKNIWQGRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEAT 356
            VEPNSFTYSS LKACAK++ + QG++IHSS NKT ALS+VFVGS+LI MYAKCG V+EA+
Sbjct: 486  VEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFVGSALIYMYAKCGYVTEAS 545

Query: 355  QIFDSMPERNLISWKAMILCYAKNGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTCGD 182
            Q+FDSMP RNL+SWKAMILCYA+NG C EALKLMYRMQAEG EVDDY+L TV   CGD
Sbjct: 546  QVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGTVYGACGD 603



 Score =  226 bits (577), Expect = 1e-56
 Identities = 123/393 (31%), Positives = 215/393 (54%), Gaps = 1/393 (0%)
 Frame = -2

Query: 1363 IHACIVKQSSS-NLIVDSAVVYFYAQCGDLGDMFRAFLWMKHGDVVSWTTVISACSQRQL 1187
            +HA I++  +S  + V + ++  Y + G L D  + F  M    VV+WT +I+      L
Sbjct: 109  VHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDL 168

Query: 1186 GDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQALGFGRQLHGAVVKYICKNDVFIETS 1007
             ++A +LF   +  G   N      +L  C        GRQ+HG +VK   + ++ ++++
Sbjct: 169  TEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKG-NRGNLIVDSA 227

Query: 1006 LVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDARNGLGEDAIHLFRVMRRRKISAN 827
            ++  YA+C +I+ +   F  M +R+ V WTSMI   ++ GLG +AI +F  M   +   N
Sbjct: 228  IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPN 287

Query: 826  KLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIYLGSTLVWLYCKCGEYTTAYNVLQ 647
            + ++ S+LKACG  R+L  G+++H  IIK  I  ++++G++LV +Y KCG    +  V  
Sbjct: 288  EFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFD 347

Query: 646  GLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEGVEPNSFTYSSALKACAKLKNIWQ 467
            G+  ++ V+WT++I+G AR G   EAL   + M  + +  N+ T  S L+AC  ++    
Sbjct: 348  GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 407

Query: 466  GRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEATQIFDSMPERNLISWKAMILCYAK 287
            GR +H+ + K    +++ +GS+L+  Y KC    +A+ +   MP R+++SW A+I   A 
Sbjct: 408  GREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAH 467

Query: 286  NGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTC 188
             G   EAL+ +  M  EG+E + +  S+ L  C
Sbjct: 468  LGHESEALEFLKNMIEEGVEPNSFTYSSTLKAC 500



 Score =  214 bits (545), Expect = 7e-53
 Identities = 119/378 (31%), Positives = 200/378 (52%), Gaps = 1/378 (0%)
 Frame = -2

Query: 1609 LISAYIRFGELISARNLFDTMSKPNVVSWTALLNAYITFGLDYQAFSFLAAFFHSGILPN 1430
            +I  Y +  ++ SA   F+ M + +VV WT+++ +    GL  +A S  +       LPN
Sbjct: 228  IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPN 287

Query: 1429 ANTFVCILNLSTRTLHFRLGQQIHACIVKQSSSN-LIVDSAVVYFYAQCGDLGDMFRAFL 1253
              +   +L         ++G+Q+H  I+K+   N + V +++V  YA+CG+L D    F 
Sbjct: 288  EFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFD 347

Query: 1252 WMKHGDVVSWTTVISACSQRQLGDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQALGF 1073
             M++ + V+WT++I+  ++  LG++A +LF  M  Q    N  T+ S+L+ACG  +A   
Sbjct: 348  GMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLT 407

Query: 1072 GRQLHGAVVKYICKNDVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDAR 893
            GR++H  +VK   + ++ I ++LV  Y KC     +  +   M  R+ VSWT++I+G A 
Sbjct: 408  GREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASMVLQLMPLRDVVSWTAIISGCAH 467

Query: 892  NGLGEDAIHLFRVMRRRKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIYL 713
             G   +A+   + M    +  N  T  S LKAC  +  +L GK +H+   K     N+++
Sbjct: 468  LGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQGKMIHSSANKTSALSNVFV 527

Query: 712  GSTLVWLYCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEGV 533
            GS L+++Y KCG  T A  V   +P++++VSW AMI   AR G   EAL  +  M  EG 
Sbjct: 528  GSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGF 587

Query: 532  EPNSFTYSSALKACAKLK 479
            E + +   +   AC  +K
Sbjct: 588  EVDDYILGTVYGACGDVK 605



 Score =  100 bits (250), Expect = 1e-18
 Identities = 58/195 (29%), Positives = 100/195 (51%)
 Frame = -2

Query: 766 KEMHAQIIKNCIHGNIYLGSTLVWLYCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARL 587
           + +HA I++N     IY+G+ L+  Y + G    A  V   +P++ VV+WTA+I+G   L
Sbjct: 107 RAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDL 166

Query: 586 GHEHEALGYLKEMLGEGVEPNSFTYSSALKACAKLKNIWQGRLIHSSVNKTPALSDVFVG 407
               EAL    + +  GV  N   +   L  CAK  +   GR IH  + K     ++ V 
Sbjct: 167 DLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGNR-GNLIVD 225

Query: 406 SSLINMYAKCGCVSEATQIFDSMPERNLISWKAMILCYAKNGFCGEALKLMYRMQAEGIE 227
           S++I  YA+C  +S A   F+ M  R+++ W +MI   ++ G   EA+ +   M ++   
Sbjct: 226 SAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFL 285

Query: 226 VDDYVLSTVLTTCGD 182
            +++ + +VL  CG+
Sbjct: 286 PNEFSVCSVLKACGE 300


>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 616

 Score =  618 bits (1593), Expect = e-174
 Identities = 310/539 (57%), Positives = 397/539 (73%), Gaps = 2/539 (0%)
 Frame = -2

Query: 1768 VSTTTNTYMDPTFLASQLQSCSTLKHVQILHXXXXXXXXXXXXXXXXXXXFNNLISAYIR 1589
            +S+  +  +D   LA  LQS + ++ ++ +H                    NNLIS+ +R
Sbjct: 75   LSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFG-----NNLISSCVR 129

Query: 1588 FGELISARNLFDTMSKPNVVSWTALLNAYITFGLDYQAFSFLAAFFHSGI-LPNANTFVC 1412
             G+L+ AR +FD+M   N V+WTA+++ Y+ FGL+ +AFS    +   GI   N   FVC
Sbjct: 130  LGDLVYARKVFDSMPDRNTVTWTAMIDGYLKFGLEDEAFSLFEDYVKHGIRFTNERMFVC 189

Query: 1411 ILNLSTRTLHFRLGQQIHACIVKQSSSNLIVDSAVVYFYAQCGDLGDMFRAFLWMKHGDV 1232
            +LNL +R   F LG+Q+H  +VK    NLIV+S++VYFYAQCG+L    RAF  M+  DV
Sbjct: 190  LLNLCSRRSEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDV 249

Query: 1231 VSWTTVISACSQRQLGDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQALGFGRQLHGA 1052
            +SWT VISACS++  G++A  +F+ MLN GF PNEFT+CS+LKAC +E+A+ FGRQ+H  
Sbjct: 250  ISWTAVISACSRKGHGNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSL 309

Query: 1051 VVKYICKNDVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDARNGLGEDA 872
            VVK + K DVF+ TSL+DMYAKCGEI+  R +F+GM+ RNTV+WTS+IA  AR G GE+A
Sbjct: 310  VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369

Query: 871  IHLFRVMRRRKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIYLGSTLVWL 692
            I LFRVM+RR + AN LT+VSIL+ACG V  LL GKE+HAQIIKN I  N+Y+GSTLVWL
Sbjct: 370  ISLFRVMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWL 429

Query: 691  YCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEGVEPNSFTY 512
            YCKCGE   A+NVLQ LP +DVVSWTAMISGC+ LGHE EAL +LKEM+ EGVEPN FTY
Sbjct: 430  YCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489

Query: 511  SSALKACAKLKNIWQGRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEATQIFDSMPE 332
            SSALKACA  +++  GR IHS   K  ALS+VFVGS+LI+MYAKCG VSEA ++FDSMPE
Sbjct: 490  SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549

Query: 331  RNLISWKAMILCYAKNGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTCGDFGWSK-EPS 158
            +NL+SWKAMI+ YA+NGFC EALKLMYRM+AEG EVDDY+ +T+L+TCGD    + EPS
Sbjct: 550  KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAEPS 608


>ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g18520 gi|110738662|dbj|BAF01256.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332658657|gb|AEE84057.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 617

 Score =  613 bits (1582), Expect = e-173
 Identities = 305/533 (57%), Positives = 392/533 (73%), Gaps = 1/533 (0%)
 Frame = -2

Query: 1777 QSHVSTTTNTYMDPTFLASQLQSCSTLKHVQILHXXXXXXXXXXXXXXXXXXXFNNLISA 1598
            Q   S+  +  +D   LA  LQS + ++ ++ +H                    NNLIS+
Sbjct: 72   QDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFG-----NNLISS 126

Query: 1597 YIRFGELISARNLFDTMSKPNVVSWTALLNAYITFGLDYQAFSFLAAFFHSGI-LPNANT 1421
             +R G+L+ AR +FD+M + N V+WTA+++ Y+ +GL+ +AF+    +   GI   N   
Sbjct: 127  CVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERM 186

Query: 1420 FVCILNLSTRTLHFRLGQQIHACIVKQSSSNLIVDSAVVYFYAQCGDLGDMFRAFLWMKH 1241
            FVC+LNL +R   F LG+Q+H  +VK    NLIV+S++VYFYAQCG+L    RAF  M+ 
Sbjct: 187  FVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEE 246

Query: 1240 GDVVSWTTVISACSQRQLGDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQALGFGRQL 1061
             DV+SWT VISACS++  G +A  +F+ MLN  F PNEFT+CS+LKAC +E+AL FGRQ+
Sbjct: 247  KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 306

Query: 1060 HGAVVKYICKNDVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDARNGLG 881
            H  VVK + K DVF+ TSL+DMYAKCGEI+  R +F+GM+ RNTV+WTS+IA  AR G G
Sbjct: 307  HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 366

Query: 880  EDAIHLFRVMRRRKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIYLGSTL 701
            E+AI LFR+M+RR + AN LT+VSIL+ACG V  LL GKE+HAQIIKN I  N+Y+GSTL
Sbjct: 367  EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 426

Query: 700  VWLYCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEGVEPNS 521
            VWLYCKCGE   A+NVLQ LP +DVVSWTAMISGC+ LGHE EAL +LKEM+ EGVEPN 
Sbjct: 427  VWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNP 486

Query: 520  FTYSSALKACAKLKNIWQGRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEATQIFDS 341
            FTYSSALKACA  +++  GR IHS   K  ALS+VFVGS+LI+MYAKCG VSEA ++FDS
Sbjct: 487  FTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDS 546

Query: 340  MPERNLISWKAMILCYAKNGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTCGD 182
            MPE+NL+SWKAMI+ YA+NGFC EALKLMYRM+AEG EVDDY+ +T+L+TCGD
Sbjct: 547  MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGD 599



 Score =  239 bits (609), Expect = 3e-60
 Identities = 126/380 (33%), Positives = 212/380 (55%), Gaps = 1/380 (0%)
 Frame = -2

Query: 1615 NNLISAYIRFGELISARNLFDTMSKPNVVSWTALLNAYITFGLDYQAFSFLAAFFHSGIL 1436
            ++L+  Y + GEL SA   FD M + +V+SWTA+++A    G   +A        +   L
Sbjct: 222  SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281

Query: 1435 PNANTFVCILNLSTRTLHFRLGQQIHACIVKQS-SSNLIVDSAVVYFYAQCGDLGDMFRA 1259
            PN  T   IL   +     R G+Q+H+ +VK+   +++ V ++++  YA+CG++ D  + 
Sbjct: 282  PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341

Query: 1258 FLWMKHGDVVSWTTVISACSQRQLGDQAFSLFLQMLNQGFTPNEFTMCSVLKACGDEQAL 1079
            F  M + + V+WT++I+A ++   G++A SLF  M  +    N  T+ S+L+ACG   AL
Sbjct: 342  FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401

Query: 1078 GFGRQLHGAVVKYICKNDVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGD 899
              G++LH  ++K   + +V+I ++LV +Y KCGE   +  +   +  R+ VSWT+MI+G 
Sbjct: 402  LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGC 461

Query: 898  ARNGLGEDAIHLFRVMRRRKISANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNI 719
            +  G   +A+   + M +  +  N  T  S LKAC     LL G+ +H+   KN    N+
Sbjct: 462  SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNV 521

Query: 718  YLGSTLVWLYCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGE 539
            ++GS L+ +Y KCG  + A+ V   +P K++VSW AMI G AR G   EAL  +  M  E
Sbjct: 522  FVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAE 581

Query: 538  GVEPNSFTYSSALKACAKLK 479
            G E + + +++ L  C  ++
Sbjct: 582  GFEVDDYIFATILSTCGDIE 601



 Score =  204 bits (518), Expect = 9e-50
 Identities = 104/299 (34%), Positives = 174/299 (58%), Gaps = 1/299 (0%)
 Frame = -2

Query: 1069 RQLHGAVVKYICKNDVFIETSLVDMYAKCGEIAHSRTIFNGMTKRNTVSWTSMIAGDARN 890
            +++H   +K      ++   +L+    + G++ ++R +F+ M ++NTV+WT+MI G  + 
Sbjct: 102  KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161

Query: 889  GLGEDAIHLFRVMRRRKIS-ANKLTMVSILKACGLVRDLLTGKEMHAQIIKNCIHGNIYL 713
            GL ++A  LF    +  I   N+   V +L  C    +   G+++H  ++K  + GN+ +
Sbjct: 162  GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIV 220

Query: 712  GSTLVWLYCKCGEYTTAYNVLQGLPLKDVVSWTAMISGCARLGHEHEALGYLKEMLGEGV 533
             S+LV+ Y +CGE T+A      +  KDV+SWTA+IS C+R GH  +A+G    ML    
Sbjct: 221  ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280

Query: 532  EPNSFTYSSALKACAKLKNIWQGRLIHSSVNKTPALSDVFVGSSLINMYAKCGCVSEATQ 353
             PN FT  S LKAC++ K +  GR +HS V K    +DVFVG+SL++MYAKCG +S+  +
Sbjct: 281  LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340

Query: 352  IFDSMPERNLISWKAMILCYAKNGFCGEALKLMYRMQAEGIEVDDYVLSTVLTTCGDFG 176
            +FD M  RN ++W ++I  +A+ GF  EA+ L   M+   +  ++  + ++L  CG  G
Sbjct: 341  VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399