BLASTX nr result

ID: Angelica23_contig00026081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00026081
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   153   4e-35
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   153   4e-35
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   152   1e-34
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   151   2e-34
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  153 bits (387), Expect = 4e-35
 Identities = 79/117 (67%), Positives = 90/117 (76%)
 Frame = +1

Query: 196 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESVDDFDSKLKE 375
           M+ + +++GLKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GR CE+VD+FDSKLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 376 NGAEMPDYFVRTLLTIIHAILPPNVXXXXXXXXXXXXXXXXXXXFPALNISDSRERV 546
           NGAEMPDYFVRTLLTIIHAILPP                     FPAL I DS+ERV
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPPK-PKSDDKGMKKDGGDGKKSKFPALGIGDSKERV 116


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  153 bits (387), Expect = 4e-35
 Identities = 79/117 (67%), Positives = 90/117 (76%)
 Frame = +1

Query: 196 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESVDDFDSKLKE 375
           M+ + +++GLKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GR CE+VD+FDSKLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 376 NGAEMPDYFVRTLLTIIHAILPPNVXXXXXXXXXXXXXXXXXXXFPALNISDSRERV 546
           NGAEMPDYFVRTLLTIIHAILPP                     FPAL I DS+ERV
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPPK-PKSDDKGMKKDGGDGKKSKFPALGIGDSKERV 116


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  152 bits (383), Expect = 1e-34
 Identities = 78/116 (67%), Positives = 89/116 (76%)
 Frame = +1

Query: 196 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESVDDFDSKLKE 375
           M+ + +++GLKKLEYLSLVSKVCTELE+HLG GDKVLAEFIT++GR CE+VD+FDSKLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 376 NGAEMPDYFVRTLLTIIHAILPPNVXXXXXXXXXXXXXXXXXXXFPALNISDSRER 543
           NGAEMPDYFVRTLLTIIHAILPP                     FPAL I DS+ER
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPPK-PKSDDKGMKKDGGDGKKSKFPALGIGDSKER 115


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  151 bits (381), Expect = 2e-34
 Identities = 78/111 (70%), Positives = 86/111 (77%)
 Frame = +1

Query: 214 DEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESVDDFDSKLKENGAEMP 393
           D GLKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITELGR CE+VD+FD+KLKENGAEMP
Sbjct: 8   DAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKENGAEMP 67

Query: 394 DYFVRTLLTIIHAILPPNVXXXXXXXXXXXXXXXXXXXFPALNISDSRERV 546
           DYFVRTLLTIIHAILPP                     F AL+I DSR+RV
Sbjct: 68  DYFVRTLLTIIHAILPPKA-EKEVKKDMEGDGSGKDSKFKALSIKDSRDRV 117


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  150 bits (380), Expect = 2e-34
 Identities = 78/117 (66%), Positives = 89/117 (76%)
 Frame = +1

Query: 196 MASEVKDEGLKKLEYLSLVSKVCTELESHLGFGDKVLAEFITELGRDCESVDDFDSKLKE 375
           +A+   D GLKKLEYLSLVSKVC+ELE+HLGFGDK+LAEFITELGR C++VD+FD+KLKE
Sbjct: 2   VAAGENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDAKLKE 61

Query: 376 NGAEMPDYFVRTLLTIIHAILPPNVXXXXXXXXXXXXXXXXXXXFPALNISDSRERV 546
           NGAEMPDYFVRTLLTIIHAILPP                     F AL+I DSR+RV
Sbjct: 62  NGAEMPDYFVRTLLTIIHAILPPKA-EKEVKKDMEGDGSGKDSKFKALSIQDSRDRV 117


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