BLASTX nr result

ID: Angelica23_contig00021596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00021596
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat...    85   1e-14
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    84   2e-14
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    82   9e-14
ref|XP_003606235.1| F-box/kelch-repeat protein [Medicago truncat...    81   2e-13
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    80   3e-13

>ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 72/202 (35%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
 Frame = +2

Query: 62  HNSLQPQQSNPTSQ-----LPGKTLPGDLIIEILCRTPVKPLVRFKCVSRAWYALIHHPN 226
           HN L     +P  +     LP  TLP D+I EILCR PVK ++RF+CV ++W  LI  P 
Sbjct: 11  HNQLSVVPPSPNHRRYNHSLP--TLPYDVIPEILCRLPVKFILRFRCVCKSWNFLISDPK 68

Query: 227 FIKKHLFHNIANNTHVIFNAYNHRNFQVRNQNYKLIALLRVDDSPIKLLDIDTRAKDNF- 403
           F+KK L  +IA N H +       N+   +  Y L +       PI    I T    NF 
Sbjct: 69  FVKKQLSVSIAWNLHFL-------NYSRWSHKYILTSY------PID--SIFTDITSNFI 113

Query: 404 --GYPKKINFTDFSKRMVLAGSINGVVLVTHTDELNGRFVALWNPSINQWKPVKIPKLPS 577
              Y        + K   + GS NG+V +   D  NG  V LWNPS       KI +LP 
Sbjct: 114 QSEYNLSNEDRTYGKLYFIIGSCNGIVCI--ADNHNG-LVILWNPSTK-----KIKQLPL 165

Query: 578 CSGSEGVTRTSVGLGYDEGADD 643
              S G T  + G GYD   D+
Sbjct: 166 YEKSNGPTLMTFGFGYDSLNDN 187


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
 Frame = +2

Query: 107 PGKTLPGDLIIEILCRTPVKPLVRFKCVSRAWYALIHHPNFIKKHLFHNIANNTHVIFNA 286
           P  TLP D+I+EI+CR PVK ++RF+CV ++W +LI  P F+KK L  +   N H +  A
Sbjct: 25  PLPTLPSDVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTRNLHFLNYA 84

Query: 287 YNHRNFQVRNQNYKLIALLRVDDSPIKLLDIDTR-AKDNFGYPKKINFTDFSKRMVLAGS 463
           Y+ R + +   +Y L       DS     DI++   + ++ Y K   F          GS
Sbjct: 85  YDSRKYIL--TSYPL-------DS--DFTDINSNFTQSDWPYAKFYRF---------IGS 124

Query: 464 INGVVLVTHTDELNGRFVALWNPSINQWKPVKIPKLPSCSGSEGVTRTSVGLGYDEGADD 643
            NG+V +   +  +   V  WNPS  ++K + + + P      GV   + G GYD   D+
Sbjct: 125 CNGIVCIADNEYTS--LVICWNPSTRKFKELPLFEKP----MTGVNVMTFGFGYDSSKDN 178


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 64/178 (35%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
 Frame = +2

Query: 119 LPGDLIIEILCRTPVKPLVRFKCVSRAWYALIHHPNFIKKHLFHNIANNTHVIFNAYNHR 298
           LP +LI EIL R P+K L +F CVS++W  LI  P F+KKH+    AN+   I++    R
Sbjct: 11  LPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKKHI-KLTANDKGYIYHRLIFR 69

Query: 299 NFQVRNQNYKLIAL--LRVDDSPI-KLLDIDTRAKDNFGYPKKINFTDFSKRMVLAGSIN 469
           N    N ++K   L  L  +   I ++L ID+           I  T  S  +V  GS+N
Sbjct: 70  N---TNNDFKFCPLPPLFTNQQLIEEILHIDS----------PIERTTLSTHIV--GSVN 114

Query: 470 GVVLVTHTDELNGRFVALWNPSINQWKPVKIPKLPSCSGSEGVTRTSVGLGYDEGADD 643
           G++ V H  +   R   +WNP+I + K  ++PK  S   S+G+     G GYDE  DD
Sbjct: 115 GLICVAHVRQ---REAYIWNPAITKSK--ELPKSTSNLCSDGI---KCGFGYDESRDD 164


>ref|XP_003606235.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355507290|gb|AES88432.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 389

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 61/189 (32%), Positives = 90/189 (47%)
 Frame = +2

Query: 77  PQQSNPTSQLPGKTLPGDLIIEILCRTPVKPLVRFKCVSRAWYALIHHPNFIKKHLFHNI 256
           P  S+    LP   LP DLI EILCR PVK L++ +CV  +W +LI HP F KKHL  + 
Sbjct: 18  PSFSSDDDSLP--ILPFDLIEEILCRLPVKLLLQLRCVCNSWNSLISHPKFSKKHLRMST 75

Query: 257 ANNTHVIFNAYNHRNFQVRNQNYKLIALLRVDDSPIKLLDIDTRAKDNFGYPKKINFTDF 436
               H I    NH   +   ++Y L ++   DD    ++        +  +P     T F
Sbjct: 76  TCRIHRI--RRNHGRSKFLLKSYTLHSVF-TDDVTTDVM--------HLSFPS----TSF 120

Query: 437 SKRMVLAGSINGVVLVTHTDELNGRFVALWNPSINQWKPVKIPKLPSCSGSEGVTRTSVG 616
               ++A S NG++ +    + +   V LWNPSI ++K  ++P L    G      +  G
Sbjct: 121 YLPSIVA-SCNGILCIADLYQTSSIHVLLWNPSIRKFK--ELPLLEKAIGHVINLTSGFG 177

Query: 617 LGYDEGADD 643
            GYD   D+
Sbjct: 178 FGYDSSTDN 186


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
 Frame = +2

Query: 104 LPGKTLPGDLIIEILCRTPVKPLVRFKCVSRAWYALIHHPNFIKKHLFHNIANNTHVIFN 283
           LP  TLP D+I EI+CR PVK ++RF+CV ++W +LI  P F+KK L  +   N H    
Sbjct: 24  LPFPTLPSDVIPEIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQLCVSTTRNLHFRNY 83

Query: 284 AYNHRNFQVRNQNYKLIALLRVDDSPIKLLDIDTRAKDNFGYPKKINFTD---------- 433
           AY+ R + + +                              YP   +FTD          
Sbjct: 84  AYDSRKYILTS------------------------------YPLDSDFTDITSNFTQSDW 113

Query: 434 -FSKRMVLAGSINGVVLVTHTDELNGRFVALWNPSINQWKPVKIPKLPSCSGSEGVTRTS 610
            ++K     GS NG+V +   +  +   V  WNPS  ++K + + + P    + G+   +
Sbjct: 114 PYAKFYRFIGSCNGIVCLADNEYTS--LVICWNPSTRKFKELPLFEKP----TTGLNVMT 167

Query: 611 VGLGYDEGADD 643
            G GYD   D+
Sbjct: 168 FGFGYDSSKDN 178


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