BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00020344
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   265   2e-68
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              265   2e-68
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   254   2e-65
ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arab...   247   4e-63
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...   246   5e-63

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  265 bits (676), Expect = 2e-68
 Identities = 134/216 (62%), Positives = 159/216 (73%)
 Frame = +2

Query: 152 NSQLLNSSHGTSANTDDGSGVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVCCLKTRYDV 331
           N ++ +S+ G  +++ D S    + IY LS YYF SK    LK +TL +R+  +K+ Y  
Sbjct: 69  NYEMGSSADGDRSSSGDSSN-HVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSR 127

Query: 332 YGMRTCVEAVILVELSNTPHLLLLQVRNSTYKLPGGRLPPGESDIEGLKRKLTNKLSVQC 511
           YG RTCV AVILVEL   PHLLLLQV+NS +KLPGGRL PGES+I GLKRKL+ KLSV  
Sbjct: 128 YGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNE 187

Query: 512 DGIVPDWEVGECLGRWWRVGFETLLLPYLPPNVRSPKECRKIFLVKLPERQKFTVPKTHK 691
           DG   DWEVGECLG WWR  FETLL PYLPPNV++PKEC K+FLVKLP  +KF VPK  K
Sbjct: 188 DGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLK 247

Query: 692 LLVVPLSQLHENHKIYGPVIAGVPQLLSKFPIEIVN 799
           LL +PL QLHEN K YGP+IAGVPQLLSKF   I++
Sbjct: 248 LLAIPLCQLHENDKTYGPIIAGVPQLLSKFSFNIID 283


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  265 bits (676), Expect = 2e-68
 Identities = 134/216 (62%), Positives = 159/216 (73%)
 Frame = +2

Query: 152 NSQLLNSSHGTSANTDDGSGVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVCCLKTRYDV 331
           N ++ +S+ G  +++ D S    + IY LS YYF SK    LK +TL +R+  +K+ Y  
Sbjct: 76  NYEMGSSADGDRSSSGDSSN-HVLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSR 134

Query: 332 YGMRTCVEAVILVELSNTPHLLLLQVRNSTYKLPGGRLPPGESDIEGLKRKLTNKLSVQC 511
           YG RTCV AVILVEL   PHLLLLQV+NS +KLPGGRL PGES+I GLKRKL+ KLSV  
Sbjct: 135 YGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNE 194

Query: 512 DGIVPDWEVGECLGRWWRVGFETLLLPYLPPNVRSPKECRKIFLVKLPERQKFTVPKTHK 691
           DG   DWEVGECLG WWR  FETLL PYLPPNV++PKEC K+FLVKLP  +KF VPK  K
Sbjct: 195 DGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLK 254

Query: 692 LLVVPLSQLHENHKIYGPVIAGVPQLLSKFPIEIVN 799
           LL +PL QLHEN K YGP+IAGVPQLLSKF   I++
Sbjct: 255 LLAIPLCQLHENDKTYGPIIAGVPQLLSKFSFNIID 290


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  254 bits (650), Expect = 2e-65
 Identities = 129/217 (59%), Positives = 160/217 (73%)
 Frame = +2

Query: 149 DNSQLLNSSHGTSANTDDGSGVEAIKIYGLSNYYFYSKPAPPLKNQTLEERVCCLKTRYD 328
           D+  ++N++H   A+ D G     + IY LS YYF SK   P +++TL +RV  +K+ Y 
Sbjct: 3   DHEVVVNNNHH-EASRDQGF---VLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYL 58

Query: 329 VYGMRTCVEAVILVELSNTPHLLLLQVRNSTYKLPGGRLPPGESDIEGLKRKLTNKLSVQ 508
            +G+RTCVEAVILVEL   PHLLLLQ++NS +KLPGGR+ PGESDI GLKRKL+ KLS  
Sbjct: 59  AHGLRTCVEAVILVELFKHPHLLLLQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNN 118

Query: 509 CDGIVPDWEVGECLGRWWRVGFETLLLPYLPPNVRSPKECRKIFLVKLPERQKFTVPKTH 688
            D    DWEVGECLG WWR  FETLL PYLPPN+++PKEC K+FLV+LP   KF VPK  
Sbjct: 119 QDQT--DWEVGECLGMWWRPDFETLLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNL 176

Query: 689 KLLVVPLSQLHENHKIYGPVIAGVPQLLSKFPIEIVN 799
           KLL VPLSQ+H+NHK YG +I+GVPQLLSK+   I+N
Sbjct: 177 KLLAVPLSQIHDNHKTYGGIISGVPQLLSKYSFRIIN 213


>ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
           lyrata] gi|297313222|gb|EFH43645.1| hypothetical protein
           ARALYDRAFT_491776 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  247 bits (630), Expect = 4e-63
 Identities = 116/192 (60%), Positives = 149/192 (77%)
 Frame = +2

Query: 221 IKIYGLSNYYFYSKPAPPLKNQTLEERVCCLKTRYDVYGMRTCVEAVILVELSNTPHLLL 400
           +++Y LS+YYF S+ A  +K++ + +RV  LK+ Y  +G+RTCVEAV+LVEL   PH+LL
Sbjct: 30  VELYPLSSYYFSSRDALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELLKHPHVLL 89

Query: 401 LQVRNSTYKLPGGRLPPGESDIEGLKRKLTNKLSVQCDGIVPDWEVGECLGRWWRVGFET 580
           LQ RNS +KLPGGRL PGESDIEG+KRKL +KLSV  + +VP  EVGEC+G WWR  FET
Sbjct: 90  LQYRNSIFKLPGGRLRPGESDIEGVKRKLASKLSVNENVVVPGLEVGECIGMWWRPNFET 149

Query: 581 LLLPYLPPNVRSPKECRKIFLVKLPERQKFTVPKTHKLLVVPLSQLHENHKIYGPVIAGV 760
           L+ P+LPPNV+ PKEC K+FLV+LP  Q+F VPK  KLL VPL QLHEN K YGP+I+ +
Sbjct: 150 LMYPFLPPNVKHPKECTKLFLVRLPVNQQFVVPKNFKLLAVPLCQLHENEKTYGPIISQI 209

Query: 761 PQLLSKFPIEIV 796
           P+LLSKF   ++
Sbjct: 210 PKLLSKFSFNMM 221


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score =  246 bits (629), Expect = 5e-63
 Identities = 122/203 (60%), Positives = 143/203 (70%), Gaps = 3/203 (1%)
 Frame = +2

Query: 197 DDGSGVEA---IKIYGLSNYYFYSKPAPPLKNQTLEERVCCLKTRYDVYGMRTCVEAVIL 367
           DD S       I IY LSNYYF SK     K++TL +RV  +K+ Y  +G+RTCVEAV+L
Sbjct: 13  DDASSAHQLSYIDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVML 72

Query: 368 VELSNTPHLLLLQVRNSTYKLPGGRLPPGESDIEGLKRKLTNKLSVQCDGIVPDWEVGEC 547
           VEL   PHLLL Q+RNS +KLPGGR+ P ESDI+GL RKLT KLS         WEV EC
Sbjct: 73  VELFKHPHLLLFQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSEC 132

Query: 548 LGRWWRVGFETLLLPYLPPNVRSPKECRKIFLVKLPERQKFTVPKTHKLLVVPLSQLHEN 727
           LG WWR  FETLL PYL  NV+  KEC K+FLVKLPE +KF VPK  KL+ VPL Q+HEN
Sbjct: 133 LGMWWRPDFETLLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHEN 192

Query: 728 HKIYGPVIAGVPQLLSKFPIEIV 796
           HK YGP+I+G+PQLLSKF   I+
Sbjct: 193 HKTYGPIISGIPQLLSKFSFNII 215