BLASTX nr result

ID: Angelica23_contig00008904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008904
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548668.1| PREDICTED: uncharacterized protein LOC100804...   111   2e-22
ref|XP_003528846.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   109   7e-22
ref|XP_003564979.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   107   3e-21
ref|NP_567171.1| RING-H2 finger B1A [Arabidopsis thaliana] gi|42...   105   1e-20
ref|XP_004156171.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   104   3e-20

>ref|XP_003548668.1| PREDICTED: uncharacterized protein LOC100804435 [Glycine max]
          Length = 227

 Score =  111 bits (277), Expect = 2e-22
 Identities = 58/115 (50%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
 Frame = -1

Query: 761 LGSPQSTDSVFAGAQMSGSSFHKASNANRME-LEFKAQDGTALASSSEIGANVSTE---- 597
           LG P STDS      +SGSSF      + +E  + KA+  +A  S S+   + S E    
Sbjct: 109 LGGPASTDSESGRVTVSGSSFETLITCDDLEESDCKAKANSAPISPSKAELSKSKEFHAL 168

Query: 596 --EEEDVCPTCFEDYTAENQKVITKCNHHFRLSCILEWMERSDTCPMCNQEMEFD 438
             EEED CP C ++Y  EN K +TKC HHF LSCILEWMERSD+CP+CNQEM FD
Sbjct: 169 VTEEEDGCPICLDEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICNQEMIFD 223


>ref|XP_003528846.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 191

 Score =  109 bits (273), Expect = 7e-22
 Identities = 58/115 (50%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
 Frame = -1

Query: 761 LGSPQSTDSVFAGAQMSGSSFHKASNA-NRMELEFKAQDGTALASSSEIGANVSTE---- 597
           LG P STDS      +SGSSF       +  E + K +  +A  S S+ G + S E    
Sbjct: 73  LGGPASTDSESGRETVSGSSFETLITCKDPEESDCKIKANSAPISPSKAGLSKSKEFHAL 132

Query: 596 --EEEDVCPTCFEDYTAENQKVITKCNHHFRLSCILEWMERSDTCPMCNQEMEFD 438
             EEED CP C E+Y  EN K +TKC HHF LSCILEWMERSD+CP+C+QEM FD
Sbjct: 133 VTEEEDGCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICDQEMIFD 187


>ref|XP_003564979.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
           distachyon]
          Length = 229

 Score =  107 bits (268), Expect = 3e-21
 Identities = 46/65 (70%), Positives = 52/65 (80%)
 Frame = -1

Query: 635 ASSSEIGANVSTEEEEDVCPTCFEDYTAENQKVITKCNHHFRLSCILEWMERSDTCPMCN 456
           A +   G  V+T E+EDVCPTC EDYT EN K+ITKC+HHF LSCI EWMERSDTCPMC 
Sbjct: 161 AKAYNSGYAVATTEDEDVCPTCLEDYTPENPKIITKCSHHFHLSCIYEWMERSDTCPMCG 220

Query: 455 QEMEF 441
           +EMEF
Sbjct: 221 KEMEF 225


>ref|NP_567171.1| RING-H2 finger B1A [Arabidopsis thaliana]
           gi|42572783|ref|NP_974488.1| RING-H2 finger B1A
           [Arabidopsis thaliana] gi|88193784|gb|ABD42981.1|
           At4g00335 [Arabidopsis thaliana]
           gi|110736762|dbj|BAF00342.1| RING-H2 finger protein
           RHB1a [Arabidopsis thaliana] gi|332656459|gb|AEE81859.1|
           RING-H2 finger B1A [Arabidopsis thaliana]
           gi|332656460|gb|AEE81860.1| RING-H2 finger B1A
           [Arabidopsis thaliana]
          Length = 190

 Score =  105 bits (262), Expect = 1e-20
 Identities = 52/115 (45%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
 Frame = -1

Query: 761 LGSPQSTDSVFAGAQMSGSSFHKASNANRM-ELEFKAQDGTALAS------SSEIGANVS 603
           LG PQ TDS     +MSGSSF   +    + E + K    + + S      S   G  + 
Sbjct: 72  LGRPQCTDSESIKGRMSGSSFETLATCEDLGESDCKTLASSVILSPRKSDFSKHQGLKIL 131

Query: 602 TEEEEDVCPTCFEDYTAENQKVITKCNHHFRLSCILEWMERSDTCPMCNQEMEFD 438
            +EEED CP CFEDY  EN ++ TKC H F LSC+LEW+ERSD CP+C++E+ FD
Sbjct: 132 VDEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFD 186


>ref|XP_004156171.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 227

 Score =  104 bits (259), Expect = 3e-20
 Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -1

Query: 743 TDSVFAGAQMSGSSFHKASNAN--RMELEFKAQDGTALASSSEIGANVSTEEEEDVCPTC 570
           +DS+ +G + +GS+  + S  N  +  L+F +   T     S +G   ++ E+EDVCPTC
Sbjct: 126 SDSLGSGGKRNGSACLEESKENFGKSSLKFPSTKST-----SGLGYAYTSSEDEDVCPTC 180

Query: 569 FEDYTAENQKVITKCNHHFRLSCILEWMERSDTCPMCNQEMEFD 438
            E+YT+EN K++TKC+HHF L CI EWMERSD CP+C + M FD
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFD 224


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