BLASTX nr result

ID: Angelica23_contig00008780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008780
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P35063.1|H2AX_PICAB RecName: Full=Histone H2AX gi|297871|emb|...   183   3e-44
ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414...   182   6e-44
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250...   181   1e-43
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...   180   3e-43
ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativu...   179   6e-43

>sp|P35063.1|H2AX_PICAB RecName: Full=Histone H2AX gi|297871|emb|CAA48030.1| histone H2A
           [Picea abies] gi|30024112|emb|CAC84681.1| putative
           histone H2B [Pinus pinaster] gi|116779069|gb|ABK21126.1|
           unknown [Picea sitchensis]
          Length = 138

 Score =  183 bits (464), Expect = 3e-44
 Identities = 97/138 (70%), Positives = 107/138 (77%)
 Frame = -1

Query: 656 MSSTEAGAGRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXX 477
           MSS+ A  GRG++K TKSVSRSQKAGLQFPVGRIARFLKAG+YA+RVG+G+PVY      
Sbjct: 1   MSSSGAKGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLE 60

Query: 476 XXXXXXXXXXXXXARDNKKSRIIPRHIQLAVRNDEELSKLLARVTIANGGVLPNINSVLL 297
                        ARDNKK+RI+PRHIQLAVRNDEELSKLL  VTIANGGVLPNI+ VLL
Sbjct: 61  YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLL 120

Query: 296 PKKVGKGKDTIGSVSQEF 243
           PKK GK K  IGS SQEF
Sbjct: 121 PKKSGKDKGEIGSASQEF 138


>ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414|gb|EEE94961.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score =  182 bits (462), Expect = 6e-44
 Identities = 98/142 (69%), Positives = 108/142 (76%), Gaps = 4/142 (2%)
 Frame = -1

Query: 656 MSSTEAGA----GRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXX 489
           MSS E GA    GRG+ K +KSVSRSQKAGLQFPVGRIARFLKAG+YA+RVG+G+PVY  
Sbjct: 1   MSSKEGGASTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLA 60

Query: 488 XXXXXXXXXXXXXXXXXARDNKKSRIIPRHIQLAVRNDEELSKLLARVTIANGGVLPNIN 309
                            ARDNKK+RI+PRHIQLAVRNDEELSKLL  VTIANGGVLPNI+
Sbjct: 61  AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 120

Query: 308 SVLLPKKVGKGKDTIGSVSQEF 243
             LLPKK+GKGK  IGS SQEF
Sbjct: 121 QTLLPKKMGKGKGDIGSASQEF 142


>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score =  181 bits (460), Expect = 1e-43
 Identities = 98/142 (69%), Positives = 107/142 (75%), Gaps = 4/142 (2%)
 Frame = -1

Query: 656 MSSTEAGA----GRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXX 489
           MSS E GA    GRG+ K +KSVSRS KAGLQFPVGRIARFLKAG+YA+RVG+G+PVY  
Sbjct: 1   MSSKEGGASTKGGRGKPKASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS 60

Query: 488 XXXXXXXXXXXXXXXXXARDNKKSRIIPRHIQLAVRNDEELSKLLARVTIANGGVLPNIN 309
                            ARDNKK+RI+PRHIQLAVRNDEELSKLL  VTIANGGVLPNI+
Sbjct: 61  AVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 120

Query: 308 SVLLPKKVGKGKDTIGSVSQEF 243
             LLPKKVGKGK  IGS SQEF
Sbjct: 121 QTLLPKKVGKGKGDIGSASQEF 142


>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
          Length = 140

 Score =  180 bits (456), Expect = 3e-43
 Identities = 97/140 (69%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
 Frame = -1

Query: 656 MSSTEAGA--GRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXX 483
           MSST      GRG+ K +KSVSRSQKAGLQFPVGRIARFLKAG+YA+RVG+G+PVY    
Sbjct: 1   MSSTGGSTKGGRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 482 XXXXXXXXXXXXXXXARDNKKSRIIPRHIQLAVRNDEELSKLLARVTIANGGVLPNINSV 303
                          ARDNKK+RI+PRHIQLAVRNDEELSKLL  VTIANGGVLPNI+  
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 302 LLPKKVGKGKDTIGSVSQEF 243
           LLPKKVGKGK  IGS SQEF
Sbjct: 121 LLPKKVGKGKGEIGSASQEF 140


>ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativus]
           gi|449528788|ref|XP_004171385.1| PREDICTED: histone
           H2AX-like [Cucumis sativus]
          Length = 139

 Score =  179 bits (453), Expect = 6e-43
 Identities = 94/137 (68%), Positives = 102/137 (74%)
 Frame = -1

Query: 653 SSTEAGAGRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYXXXXXXX 474
           SS     GRG+ K TKSVSRSQKAGLQFPVGRIARFLKAG+YA+RVG+G+PVY       
Sbjct: 3   SSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 62

Query: 473 XXXXXXXXXXXXARDNKKSRIIPRHIQLAVRNDEELSKLLARVTIANGGVLPNINSVLLP 294
                       ARDNKK+RI+PRHIQLAVRNDEELSKLL  VTIANGGVLPNI+  LLP
Sbjct: 63  LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQTLLP 122

Query: 293 KKVGKGKDTIGSVSQEF 243
           KK G GK  IGS SQEF
Sbjct: 123 KKAGSGKGDIGSASQEF 139


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