BLASTX nr result

ID: Angelica23_contig00008696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008696
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_683305.2| Ribosomal L.8/L5e family protein [Arabidopsis t...   202   7e-50
ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   200   5e-49
gb|AFK37698.1| unknown [Lotus japonicus]                              199   6e-49
ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu...   199   8e-49
ref|XP_002522446.1| 50S ribosomal protein L18, chloroplast precu...   196   5e-48

>ref|NP_683305.2| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
           gi|332191001|gb|AEE29122.1| Ribosomal L.8/L5e family
           protein [Arabidopsis thaliana]
          Length = 165

 Score =  202 bits (515), Expect = 7e-50
 Identities = 106/163 (65%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
 Frame = +2

Query: 113 ALGMFQAPQFNSCNVFGTRIL-YPSKFLSIHTNVHLKPMKIEARNNTRTESPKICNRRMR 289
           AL      QF   ++ GTR+  YP   + I T   +KP  IEAR NTR ESPK  NRR R
Sbjct: 3   ALTSLSTVQFRVSDILGTRLKPYPQFPIRITTMSVVKPFVIEARGNTRVESPKTRNRRSR 62

Query: 290 KKFNGTPTRPRLSVFCSDKQLYAMLVDDHNKKNLFYGSTLQKAMREDPSCSTVEAAKRVG 469
           KKF GT T+PRLSVFCSDKQLYAMLVDD NKK LFY STLQK++R DP C+ +EAAKRVG
Sbjct: 63  KKFTGTQTKPRLSVFCSDKQLYAMLVDDFNKKCLFYASTLQKSIRGDPPCTVIEAAKRVG 122

Query: 470 EELVKACIDLNINEISSYDLNGFVRGAKIEAFEIAISRHGFLP 598
           EEL+KA IDL INEISSYD NG  RG +++AFEIAI++HGFLP
Sbjct: 123 EELIKASIDLKINEISSYDRNGNKRGERMQAFEIAIAQHGFLP 165


>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  200 bits (508), Expect = 5e-49
 Identities = 99/140 (70%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
 Frame = +2

Query: 179 PSKFLSIHT-NVHLKPMKIEARNNTRTESPKICNRRMRKKFNGTPTRPRLSVFCSDKQLY 355
           P  F S+ T +  +KP+ I+AR N++TES K+ NRRM+KK+NGTPTRPRLSVFCSDKQLY
Sbjct: 40  PFDFRSLKTKHCDVKPLTIQARGNSKTESAKVRNRRMQKKYNGTPTRPRLSVFCSDKQLY 99

Query: 356 AMLVDDHNKKNLFYGSTLQKAMREDPSCSTVEAAKRVGEELVKACIDLNINEISSYDLNG 535
           AMLVDD NKK LFYGSTLQK+MR  PSC+T+EAA+ VGEELVK C+DLNI+EIS YD NG
Sbjct: 100 AMLVDDQNKKCLFYGSTLQKSMRPTPSCTTIEAAQHVGEELVKVCMDLNIHEISLYDRNG 159

Query: 536 FVRGAKIEAFEIAISRHGFL 595
           F  G K++AFEIAISR+GFL
Sbjct: 160 FACGEKMQAFEIAISRYGFL 179


>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  199 bits (507), Expect = 6e-49
 Identities = 106/158 (67%), Positives = 119/158 (75%), Gaps = 3/158 (1%)
 Frame = +2

Query: 131 APQFNSCNVFGTRILYPSKFLSIHTNVHL---KPMKIEARNNTRTESPKICNRRMRKKFN 301
           A  F S +VFG   + P  F+           KP+ +EAR NTRTESPKI NRRM+KKFN
Sbjct: 8   ALHFKSSSVFG---INPKSFIYFQGQSRCLIKKPLVVEARANTRTESPKIRNRRMQKKFN 64

Query: 302 GTPTRPRLSVFCSDKQLYAMLVDDHNKKNLFYGSTLQKAMREDPSCSTVEAAKRVGEELV 481
           GT   PRLSVFCSDKQLYAMLVDD NKK LFYGSTL K+ RE+P CSTVEAA+RVGE LV
Sbjct: 65  GTARHPRLSVFCSDKQLYAMLVDDKNKKCLFYGSTLHKSFRENPPCSTVEAAQRVGEALV 124

Query: 482 KACIDLNINEISSYDLNGFVRGAKIEAFEIAISRHGFL 595
           KAC DL INEISSYD NGF RG +++AFEIAIS +GFL
Sbjct: 125 KACTDLKINEISSYDRNGFGRGQRLDAFEIAISSYGFL 162


>ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355515149|gb|AES96772.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 189

 Score =  199 bits (506), Expect = 8e-49
 Identities = 105/169 (62%), Positives = 124/169 (73%), Gaps = 3/169 (1%)
 Frame = +2

Query: 107 VMALGMFQAPQFNSCNVFGTRILYPSKFLSIH---TNVHLKPMKIEARNNTRTESPKICN 277
           V  +  F+  QFN+ + FG   + P  F+S     T++  K +  +A+ N R ES KI N
Sbjct: 2   VQVVNSFELFQFNTSSFFG---VIPKPFISFQPQTTSLIKKSLVTKAKANARKESAKIRN 58

Query: 278 RRMRKKFNGTPTRPRLSVFCSDKQLYAMLVDDHNKKNLFYGSTLQKAMREDPSCSTVEAA 457
           R+M+KKFNGT T PRLSVFCSDKQLYAMLVDD NKK LFYGSTLQK  RE+P CST+EAA
Sbjct: 59  RKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKLFRENPPCSTIEAA 118

Query: 458 KRVGEELVKACIDLNINEISSYDLNGFVRGAKIEAFEIAISRHGFLPEE 604
           +RVGE LVKAC+DLNINEISSYD NGF RG ++ AFEIAIS  GFL  E
Sbjct: 119 QRVGEALVKACVDLNINEISSYDRNGFGRGERLNAFEIAISNFGFLTNE 167


>ref|XP_002522446.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
           communis] gi|223538331|gb|EEF39938.1| 50S ribosomal
           protein L18, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  196 bits (499), Expect = 5e-48
 Identities = 103/164 (62%), Positives = 121/164 (73%), Gaps = 1/164 (0%)
 Frame = +2

Query: 110 MALGMFQAPQFNSCNVFGTRILYPSKFLSIHT-NVHLKPMKIEARNNTRTESPKICNRRM 286
           MAL   +A QF +C+ FG R      FL + T N     +    R NT+TES K  N R 
Sbjct: 1   MALVNVRALQFKNCDFFGNRSK-AFTFLPLQTTNFQAMTVMASKRANTKTESAKTINIRR 59

Query: 287 RKKFNGTPTRPRLSVFCSDKQLYAMLVDDHNKKNLFYGSTLQKAMREDPSCSTVEAAKRV 466
           RKKFNGTP +PRLSVFCS KQLYAMLVDD NKK LFYGSTLQK++R  P CS +EAAK +
Sbjct: 60  RKKFNGTPIKPRLSVFCSTKQLYAMLVDDQNKKCLFYGSTLQKSLRGSPPCSKIEAAKCL 119

Query: 467 GEELVKACIDLNINEISSYDLNGFVRGAKIEAFEIAISRHGFLP 598
           GEELVKAC+DL++NEISSYD NGF RG +++AFE+AISRHGFLP
Sbjct: 120 GEELVKACVDLDVNEISSYDRNGFPRGERMQAFELAISRHGFLP 163


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