BLASTX nr result

ID: Angelica23_contig00008683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008683
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   114   1e-23
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,...   113   1e-23

>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/91 (61%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   FSEAFQHFVMLMKTGLKPTVVSFVNVFPA---IRDVCDANVLYGMLIKMGSEYVNDMFAV 172
           + EA + F ++MK G+KP+ VSFVNVFPA   + D  +AN LYGML+KMGSEYVND+F V
Sbjct: 204 YVEAIRLFRLVMKMGIKPSPVSFVNVFPAFSSVEDFKNANALYGMLVKMGSEYVNDLFVV 263

Query: 173 SSAVFVYSELGELDSARKVFDQCLDRNTEVW 265
           SSA+F+++ELG +D ARKVFD CL++NTE+W
Sbjct: 264 SSAIFMFAELGHIDFARKVFDHCLEKNTEIW 294


>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/91 (61%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   FSEAFQHFVMLMKTGLKPTVVSFVNVFPAIRDVCD---ANVLYGMLIKMGSEYVNDMFAV 172
           ++EA + F M+MK G+KP+ VSFVNVFPA   + D   ANV++GML+K+GSEYVND++ V
Sbjct: 191 YAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVV 250

Query: 173 SSAVFVYSELGELDSARKVFDQCLDRNTEVW 265
           SSA+F+Y+ELG L+ A+KVFD CL+RNTEVW
Sbjct: 251 SSAIFMYAELGCLEFAKKVFDNCLERNTEVW 281


>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/91 (61%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   FSEAFQHFVMLMKTGLKPTVVSFVNVFPAIRDVCD---ANVLYGMLIKMGSEYVNDMFAV 172
           ++EA + F M+MK G+KP+ VSFVNVFPA   + D   ANV++GML+K+GSEYVND++ V
Sbjct: 167 YAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVV 226

Query: 173 SSAVFVYSELGELDSARKVFDQCLDRNTEVW 265
           SSA+F+Y+ELG L+ A+KVFD CL+RNTEVW
Sbjct: 227 SSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/89 (59%), Positives = 73/89 (82%), Gaps = 3/89 (3%)
 Frame = +2

Query: 8   EAFQHFVMLMKTGLKPTVVSFVNVFPAI---RDVCDANVLYGMLIKMGSEYVNDMFAVSS 178
           EAF+ F  +M+ G++PT VSFVNVFPA+    D  +ANVLYG+++K+GS+YV+D F VSS
Sbjct: 201 EAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSS 260

Query: 179 AVFVYSELGELDSARKVFDQCLDRNTEVW 265
           A+F+Y+ELG +D AR++FD CL+RNTEVW
Sbjct: 261 AIFMYAELGCVDFAREIFDCCLERNTEVW 289


>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/91 (60%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   FSEAFQHFVMLMKTGLKPTVVSFVNVFPAIRDVCD---ANVLYGMLIKMGSEYVNDMFAV 172
           + EA + F ++MK G+KP+ VSFVNVFPAI  V D   ANVLYGML+K+G+EY ND+F V
Sbjct: 81  YVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVV 140

Query: 173 SSAVFVYSELGELDSARKVFDQCLDRNTEVW 265
           SSA+ +Y+ELG LD  RKVFD CL+++ EVW
Sbjct: 141 SSAISMYAELGCLDLCRKVFDSCLEKSAEVW 171


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