BLASTX nr result

ID: Angelica23_contig00008675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008675
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528188.1| ran-binding protein, putative [Ricinus commu...    98   6e-19
ref|XP_004158984.1| PREDICTED: uncharacterized protein LOC101224...    91   7e-17
ref|NP_564606.1| nucleoporin 50 protein [Arabidopsis thaliana] g...    86   2e-15
ref|XP_002299634.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002891695.1| Ran-binding protein 1 domain-containing prot...    85   5e-15

>ref|XP_002528188.1| ran-binding protein, putative [Ricinus communis]
           gi|223532400|gb|EEF34195.1| ran-binding protein,
           putative [Ricinus communis]
          Length = 445

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/73 (65%), Positives = 60/73 (82%)
 Frame = +1

Query: 109 MGDADNNLPSLKKRTAERQITKENFGLDDDEDTSGQDTGTFRRASDDVLAQRRIVKVRRP 288
           MGDA+N LPS KKR A R+I+++N GLDD+EDT  Q+TGTF+RASD+VLA RRIVKVRR 
Sbjct: 1   MGDAENTLPSSKKRAAGREISRDNPGLDDEEDTLEQETGTFKRASDEVLAGRRIVKVRRS 60

Query: 289 SGAPSAASNPFAG 327
             + + +SNPFAG
Sbjct: 61  QTSSTPSSNPFAG 73


>ref|XP_004158984.1| PREDICTED: uncharacterized protein LOC101224991 [Cucumis sativus]
          Length = 466

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/73 (64%), Positives = 59/73 (80%)
 Frame = +1

Query: 109 MGDADNNLPSLKKRTAERQITKENFGLDDDEDTSGQDTGTFRRASDDVLAQRRIVKVRRP 288
           MGDA+N   S KKR A R+++++N GLDDDED S Q+TGTF+RAS++VLA RRIVKVRR 
Sbjct: 1   MGDAEN-ATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRG 59

Query: 289 SGAPSAASNPFAG 327
           S A + +SNPFAG
Sbjct: 60  STASAPSSNPFAG 72


>ref|NP_564606.1| nucleoporin 50 protein [Arabidopsis thaliana]
           gi|12323129|gb|AAG51549.1|AC037424_14 unknown protein;
           23094-21772 [Arabidopsis thaliana]
           gi|14335002|gb|AAK59765.1| At1g52380/F19K6_4
           [Arabidopsis thaliana] gi|16323322|gb|AAL15374.1|
           At1g52380/F19K6_4 [Arabidopsis thaliana]
           gi|332194676|gb|AEE32797.1| nucleoporin 50 protein
           [Arabidopsis thaliana]
          Length = 440

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/75 (57%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
 Frame = +1

Query: 109 MGDADNNLPSLKKRTAERQITKENFGLDDDEDTSGQDTGTFRRASDDVLAQRRIVKVRR- 285
           MGD++N     KKR A +Q++++N GLDDD+D++  ++GTF++ASD+VLA RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 286 -PSGAPSAASNPFAG 327
            PS AP AASNPFAG
Sbjct: 61  EPSAAPVAASNPFAG 75


>ref|XP_002299634.1| predicted protein [Populus trichocarpa] gi|222846892|gb|EEE84439.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = +1

Query: 109 MGDADNNLPSLKKRTAERQITKENFGLDDDEDTSGQDTGTFRRASDDVLAQRRIVKVRRP 288
           MGDA+N+LP  KKR A R+I+++N GLDDD D+  Q+TGTF+RAS++VLA RRIVKVRR 
Sbjct: 1   MGDAENSLPPSKKRAAGREISRDNPGLDDD-DSVEQETGTFKRASEEVLAGRRIVKVRRN 59

Query: 289 SGAPSAASNPFA 324
               + +SNPFA
Sbjct: 60  QTTSTPSSNPFA 71


>ref|XP_002891695.1| Ran-binding protein 1 domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297337537|gb|EFH67954.1| Ran-binding
           protein 1 domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 440

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/75 (56%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +1

Query: 109 MGDADNNLPSLKKRTAERQITKENFGLDDDEDTSGQDTGTFRRASDDVLAQRRIVKVRR- 285
           MGD++N     KKR A +Q++++N GLDDD+D++  +TGTF++ASD+VLA RRI +V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELETGTFKKASDEVLASRRIFRVKRK 60

Query: 286 -PSGAPSAASNPFAG 327
            PS AP+AA NPFAG
Sbjct: 61  EPSAAPAAAPNPFAG 75


Top