BLASTX nr result

ID: Angelica23_contig00008528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00008528
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15412.3| unnamed protein product [Vitis vinifera]              402   e-109
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   398   e-108
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   385   e-105
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   375   e-101
gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]        363   3e-98

>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  402 bits (1032), Expect = e-109
 Identities = 200/247 (80%), Positives = 218/247 (88%)
 Frame = +3

Query: 6    ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFG 185
            ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT+KSLIIIDELGRGTSTYDGFG
Sbjct: 699  ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFG 758

Query: 186  LAWAICEHLVQEIKAPTLFATHFHELTALAHGDTAQSSKMNNIVGVRNYHVSAHIDSSSR 365
            LAWAICEH+V+ IKAPTLFATHFHELTALAH +T        IVGV NYHVSAHIDSSSR
Sbjct: 759  LAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHVSAHIDSSSR 818

Query: 366  KLTMLYKVEQGPCDQSFGIHVAEFAKFPESVVALAREKAAELEDFSPTSFVSKDASKEES 545
            KLTMLYKVE G CDQSFGIHVAEFA FPESVV LAREKAAELEDFSPT  VS DAS +  
Sbjct: 819  KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTEIVSNDASDKGL 878

Query: 546  QVGCKRKREYNPDDMSRGALQARQFLKKFSEMPLDKMDMEQALQEVRTLKNDLQKDAVGC 725
            +VG KRKRE +PDD+SRGA +A QFLK+FS++PL+KMD+++ALQ+V  LKNDL+KDAV C
Sbjct: 879  KVGSKRKRESSPDDISRGAARAHQFLKEFSDLPLEKMDLKEALQQVSKLKNDLEKDAVNC 938

Query: 726  QWLQQFF 746
             WLQQFF
Sbjct: 939  HWLQQFF 945


>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  398 bits (1022), Expect = e-108
 Identities = 200/247 (80%), Positives = 217/247 (87%)
 Frame = +3

Query: 6    ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFG 185
            ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT+KSLIIIDELGRGTSTYDGFG
Sbjct: 659  ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFG 718

Query: 186  LAWAICEHLVQEIKAPTLFATHFHELTALAHGDTAQSSKMNNIVGVRNYHVSAHIDSSSR 365
            LAWAICEH+V+ IKAPTLFATHFHELTALAH +T        IVGV NYHVSAHIDSSSR
Sbjct: 719  LAWAICEHIVEVIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHVSAHIDSSSR 778

Query: 366  KLTMLYKVEQGPCDQSFGIHVAEFAKFPESVVALAREKAAELEDFSPTSFVSKDASKEES 545
            KLTMLYKVE G CDQSFGIHVAEFA FPESVV LAREKAAELEDFSPT  VS DAS    
Sbjct: 779  KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTEIVSNDAS---D 835

Query: 546  QVGCKRKREYNPDDMSRGALQARQFLKKFSEMPLDKMDMEQALQEVRTLKNDLQKDAVGC 725
            +VG KRKRE +PDD+SRGA +A QFLK+FS++PL+KMD+++ALQ+V  LKNDL+KDAV C
Sbjct: 836  KVGSKRKRESSPDDISRGAARAHQFLKEFSDLPLEKMDLKEALQQVSKLKNDLEKDAVNC 895

Query: 726  QWLQQFF 746
             WLQQFF
Sbjct: 896  HWLQQFF 902


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
            predicted protein [Populus trichocarpa]
          Length = 944

 Score =  385 bits (990), Expect = e-105
 Identities = 193/247 (78%), Positives = 213/247 (86%)
 Frame = +3

Query: 6    ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFG 185
            ISVRDCIFARVGAGDCQ+RGVSTFMQEMLETASILKGAT++SLIIIDELGRGTSTYDGFG
Sbjct: 701  ISVRDCIFARVGAGDCQMRGVSTFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFG 760

Query: 186  LAWAICEHLVQEIKAPTLFATHFHELTALAHGDTAQSSKMNNIVGVRNYHVSAHIDSSSR 365
            LAWAICEHLV+E+KAPTLFATHFHELTALAH    Q      IVGV NYHVSAHIDSS+ 
Sbjct: 761  LAWAICEHLVRELKAPTLFATHFHELTALAHQKPDQEPHAKQIVGVANYHVSAHIDSSNH 820

Query: 366  KLTMLYKVEQGPCDQSFGIHVAEFAKFPESVVALAREKAAELEDFSPTSFVSKDASKEES 545
            KLTMLYKVE G CDQSFGIHVAEFA FPESVV LAREKAAELEDFSPT+ +S DA +E  
Sbjct: 821  KLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFSPTAIISDDAREE-- 878

Query: 546  QVGCKRKREYNPDDMSRGALQARQFLKKFSEMPLDKMDMEQALQEVRTLKNDLQKDAVGC 725
             VG KRKRE N DDMS+GA +A +FLK FS++PLD MD++QAL ++  LK+DL+KDAV C
Sbjct: 879  -VGSKRKRECNMDDMSKGAARAHRFLKDFSDLPLDTMDLKQALLQIGKLKDDLEKDAVNC 937

Query: 726  QWLQQFF 746
             WLQQFF
Sbjct: 938  HWLQQFF 944


>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
            gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
            MSH2, putative [Ricinus communis]
          Length = 936

 Score =  375 bits (962), Expect = e-101
 Identities = 190/247 (76%), Positives = 211/247 (85%)
 Frame = +3

Query: 6    ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFG 185
            ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT+KSLIIIDELGRGTSTYDGFG
Sbjct: 695  ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFG 754

Query: 186  LAWAICEHLVQEIKAPTLFATHFHELTALAHGDTAQSSKMNNIVGVRNYHVSAHIDSSSR 365
            LAWAICEHLVQ IKAPTLFATHFHELT LA  D      M  I GV NYHVSAHIDSS+R
Sbjct: 755  LAWAICEHLVQVIKAPTLFATHFHELTGLA--DEKAEPHMKQIAGVANYHVSAHIDSSNR 812

Query: 366  KLTMLYKVEQGPCDQSFGIHVAEFAKFPESVVALAREKAAELEDFSPTSFVSKDASKEES 545
            KLTMLYKVE G CDQSFGIHVAEFA FPESVVALAREKAAELEDFSP + VS D ++   
Sbjct: 813  KLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSPNAIVSNDTTE--- 869

Query: 546  QVGCKRKREYNPDDMSRGALQARQFLKKFSEMPLDKMDMEQALQEVRTLKNDLQKDAVGC 725
            +VG KR R+ +PDD+SRGA +A +FLK+FS++PL+ MD+++ALQ+V  LK  L+KDA  C
Sbjct: 870  KVGSKRNRKCDPDDVSRGAARAHKFLKEFSDLPLETMDLKEALQQVSKLKEGLEKDAANC 929

Query: 726  QWLQQFF 746
            QWL+QFF
Sbjct: 930  QWLKQFF 936


>gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 942

 Score =  363 bits (933), Expect = 3e-98
 Identities = 181/247 (73%), Positives = 208/247 (84%)
 Frame = +3

Query: 6    ISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFG 185
            IS+RDCIFARVGAGDCQLRGVSTFMQEMLETASILKGAT+KSLIIIDELGRGTSTYDGFG
Sbjct: 699  ISIRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFG 758

Query: 186  LAWAICEHLVQEIKAPTLFATHFHELTALAHGDTAQSSKMNNIVGVRNYHVSAHIDSSSR 365
            LAWAICEH+V+ IKAPTLFATHFHELTALA+ +     K   I GV N+HVSAHID+SSR
Sbjct: 759  LAWAICEHIVEVIKAPTLFATHFHELTALANANGDNGHK--QIAGVANFHVSAHIDASSR 816

Query: 366  KLTMLYKVEQGPCDQSFGIHVAEFAKFPESVVALAREKAAELEDFSPTSFVSKDASKEES 545
            KLTMLYKV+ G CDQSFGIHVAEFA FP SVV LAREKA+ELEDFSP + +  D  K  S
Sbjct: 817  KLTMLYKVQPGACDQSFGIHVAEFANFPRSVVDLAREKASELEDFSPNAMILNDGEKAAS 876

Query: 546  QVGCKRKREYNPDDMSRGALQARQFLKKFSEMPLDKMDMEQALQEVRTLKNDLQKDAVGC 725
                KRKR ++P+D+SRG+ +ARQFL+ F+ +PLDKMD +QALQ++  +K DL++DAV C
Sbjct: 877  ----KRKRNFDPNDVSRGSARARQFLEDFTNLPLDKMDQKQALQQLSKMKTDLERDAVDC 932

Query: 726  QWLQQFF 746
             WLQQFF
Sbjct: 933  NWLQQFF 939


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