BLASTX nr result

ID: Angelica23_contig00006995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00006995
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   339   9e-91
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...   335   2e-89
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   334   4e-89
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   333   7e-89
emb|CBI40396.3| unnamed protein product [Vitis vinifera]              329   1e-87

>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score =  339 bits (870), Expect = 9e-91
 Identities = 191/358 (53%), Positives = 236/358 (65%), Gaps = 11/358 (3%)
 Frame = +1

Query: 82   VHASQKPSKVNVLYAPSEDATEHYKESWDSKATYGAGN-ITGHRMSDGVQRKCKNVMNKF 258
            +HAS K S++++  AP EDA EH +ESWD K T  +G+ + G +MSD +QR+CKNV++K 
Sbjct: 1895 LHASPKSSRLHMQAAPPEDAAEHSRESWDGKVTNASGSSVLGSKMSDVIQRRCKNVISKL 1954

Query: 259  QRRIDKEGHQIVPLVTELWKKSESTGYMRG--NCQLHIRKIDQRLENFGYNGVMEFVSDV 432
            QRRIDKEG  IVP++T+LWK+ ES+GYM G  N  L +RKI+ R++   YNGVME V DV
Sbjct: 1955 QRRIDKEGQHIVPVLTDLWKRMESSGYMSGAGNNLLDLRKIETRVDRLEYNGVMELVVDV 2014

Query: 433  QLMLKGAVQFYGFSHEVRTEARKVHDLFFDILKMIFPETDFLEARGAVSFSGH-AASTSV 609
            Q MLKGA+QFY FSHE R+EARKVHDLFFDILK+ FP+TDF EAR A+SFS   + S+S 
Sbjct: 2015 QFMLKGAMQFYTFSHEARSEARKVHDLFFDILKIAFPDTDFREARNALSFSNPLSTSSSA 2074

Query: 610  PPSRKILVGQGKPTQQSNEVDPDLSHRQKPPSH--VPHSNEDTRIRSHTPHRETRFGS-- 777
            P  R+  VGQ K  +  NEV+PD     KP     +P S +DTR++ H P +ETR G+  
Sbjct: 2075 PSPRQAAVGQSKRHRLINEVEPDNGSAHKPIQRGSIP-SGDDTRVKVHLP-KETRHGTGS 2132

Query: 778  -SNRELGQQEDSSLLAHPGALVICKKKRKDREKSAVKSVNGSAGPASPVSFGGNIRSPGS 954
             S RE  QQ+DS L  HPG LVICKKKRKDR+KS  KS  GS+GP SP S    I SP  
Sbjct: 2133 GSTREQYQQDDSPL--HPGELVICKKKRKDRDKSMAKSRPGSSGPVSPPSMARTITSPVQ 2190

Query: 955  GSLSKDTRXXXXXXXXXXXXXXXXXX--AXXXXXXXXXWANPVKRIRTDTGKRRPSHL 1122
            GS S++TR                              WANPVKR+RTD GKRRPSHL
Sbjct: 2191 GSASRETRMSQQNPHQQGWGNQPQPANNGRGGGGGSVGWANPVKRLRTDAGKRRPSHL 2248


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score =  335 bits (859), Expect = 2e-89
 Identities = 190/355 (53%), Positives = 233/355 (65%), Gaps = 8/355 (2%)
 Frame = +1

Query: 82   VHASQKPSKVNVLYAPSEDATEHYKESWDSKATYGAGNITGHRMSDGVQRKCKNVMNKFQ 261
            + AS K S++N+  AP+EDA EH +ESWD K    +G  T  +MSD +QR+CKNV++KFQ
Sbjct: 1874 LRASPKSSRLNLQSAPAEDAAEHSRESWDGKVPSTSGASTLGKMSDVIQRRCKNVISKFQ 1933

Query: 262  RRIDKEGHQIVPLVTELWKKSESTGYMRG--NCQLHIRKIDQRLENFGYNGVMEFVSDVQ 435
            RRIDKEG QIVPL+ +LWK+ E+ GY+ G     L +RKI+QR++   Y+GVME V DVQ
Sbjct: 1934 RRIDKEGQQIVPLLADLWKRIENPGYISGAGTNLLDLRKIEQRVDRLEYSGVMELVFDVQ 1993

Query: 436  LMLKGAVQFYGFSHEVRTEARKVHDLFFDILKMIFPETDFLEARGAVSFSG-HAASTSVP 612
             MLKGA+QFYGFSHEVRTEARKVHDLFFDILK+ FP+TDF EAR   SFSG  + S S P
Sbjct: 1994 FMLKGAMQFYGFSHEVRTEARKVHDLFFDILKIAFPDTDFREARDTFSFSGPSSTSISAP 2053

Query: 613  PSRKILVGQGKPTQQSNEVDPDLSHRQKPPSH--VPHSNEDTRIRSHTPHRETRFGS--- 777
              ++  +G  K  +  N+V+PD S   KP     +P + +DTR R H P +ETR GS   
Sbjct: 2054 SPKQAALGLIKRHKSINDVEPDNSTTHKPMQRGSIP-TGDDTR-RVHVPQKETRLGSGSG 2111

Query: 778  SNRELGQQEDSSLLAHPGALVICKKKRKDREKSAVKSVNGSAGPASPVSFGGNIRSPGSG 957
            S+RE   Q+DS L  HPG LVICKKKRKDR+KS V+S  GS+GP SP S G NI SP   
Sbjct: 2112 SSREQYPQDDSPL--HPGELVICKKKRKDRDKSVVRSRTGSSGPVSPPSMGRNITSPILS 2169

Query: 958  SLSKDTRXXXXXXXXXXXXXXXXXXAXXXXXXXXXWANPVKRIRTDTGKRRPSHL 1122
            S+ KD R                            WANPVKR+RTD GKRRPSHL
Sbjct: 2170 SIPKDAR--PNQQNTHQQGWVNQPQPTNGGAGSVGWANPVKRLRTDAGKRRPSHL 2222


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  334 bits (856), Expect = 4e-89
 Identities = 187/360 (51%), Positives = 231/360 (64%), Gaps = 13/360 (3%)
 Frame = +1

Query: 82   VHASQKPSKVNVLYAPSEDATEHYKESWDSKATYGAGNITGHRMSDGVQRKCKNVMNKFQ 261
            +HAS K  K+N + A +ED  EH +E WD K      N  G RM + +QRKCKNV++K Q
Sbjct: 1910 LHASPKSGKLNCMSARAEDVAEHSREGWDGKVM----NTGGPRMPEIMQRKCKNVISKLQ 1965

Query: 262  RRIDKEGHQIVPLVTELWKKSESTGYMRG--NCQLHIRKIDQRLENFGYNGVMEFVSDVQ 435
            RRIDKEGHQIVPL+T+ WK+ E++GY+ G  N  L +RKIDQR++   Y GVME V DVQ
Sbjct: 1966 RRIDKEGHQIVPLLTDWWKRVENSGYISGPGNNILDLRKIDQRIDRLEYIGVMELVFDVQ 2025

Query: 436  LMLKGAVQFYGFSHEVRTEARKVHDLFFDILKMIFPETDFLEARGAVSFSGHAAS-TSVP 612
             MLK ++Q+YG SHEVR EARKVH+LFF+ILK+ FP+TDF EAR A+SFSG  ++  S P
Sbjct: 2026 QMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPDTDFREARNAISFSGPVSTPASAP 2085

Query: 613  PSRKILVGQGKPTQQSNEVDPDLSHRQK--------PPSHVPHSNEDTRIRSHTPHRETR 768
              R+  VGQGK  +  NEV+PD S   K          +    ++EDTR +SH   +E+R
Sbjct: 2086 SPRQAAVGQGKRHKPINEVEPDPSPPPKQLLRGAAAAAAAAAAASEDTRAKSHISQKESR 2145

Query: 769  FGSSNRELGQQEDSSLLAHPGALVICKKKRKDREKSAVKSVNGSAGPASPVSFGGNIRSP 948
             GSS+     Q+DS LL HPG LVI KKKRKDREKSA K  +GS+GP SP S G +IRSP
Sbjct: 2146 LGSSSSR--DQDDSPLLTHPGDLVISKKKRKDREKSAAKPRSGSSGPVSPPSMGRSIRSP 2203

Query: 949  GSGSLSKDTRXXXXXXXXXXXXXXXXXXA--XXXXXXXXXWANPVKRIRTDTGKRRPSHL 1122
            G GS+ KD R                  A           WANPVKR+RTD GKRRPSHL
Sbjct: 2204 GPGSMQKDGRSTQQATHQQAWASQPAQQANGGSGGGGTVGWANPVKRMRTDAGKRRPSHL 2263


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  333 bits (854), Expect = 7e-89
 Identities = 187/360 (51%), Positives = 230/360 (63%), Gaps = 13/360 (3%)
 Frame = +1

Query: 82   VHASQKPSKVNVLYAPSEDATEHYKESWDSKATYGAGNITGHRMSDGVQRKCKNVMNKFQ 261
            +HAS K  K+N + A +ED  EH +E WD K      N  G RM + +QRKCKNV++K Q
Sbjct: 1885 LHASPKSGKLNCMSARAEDVAEHSREGWDGKVM----NTGGPRMPEIMQRKCKNVISKLQ 1940

Query: 262  RRIDKEGHQIVPLVTELWKKSESTGYMRG--NCQLHIRKIDQRLENFGYNGVMEFVSDVQ 435
            RRIDKEGHQIVPL+T+ WK+ E +GY+ G  N  L +RKIDQR++   Y GVME V DVQ
Sbjct: 1941 RRIDKEGHQIVPLLTDWWKRVEXSGYISGPGNNILDLRKIDQRIDRLEYIGVMELVFDVQ 2000

Query: 436  LMLKGAVQFYGFSHEVRTEARKVHDLFFDILKMIFPETDFLEARGAVSFSGHAAS-TSVP 612
             MLK ++Q+YG SHEVR EARKVH+LFF+ILK+ FP+TDF EAR A+SFSG  ++  S P
Sbjct: 2001 QMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPDTDFREARNAISFSGPVSTPASAP 2060

Query: 613  PSRKILVGQGKPTQQSNEVDPDLSHRQK--------PPSHVPHSNEDTRIRSHTPHRETR 768
              R+  VGQGK  +  NEV+PD S   K          +    ++EDTR +SH   +E+R
Sbjct: 2061 SPRQAAVGQGKRHKPINEVEPDPSPPPKQLLRGAAAAAAAAAAASEDTRAKSHISQKESR 2120

Query: 769  FGSSNRELGQQEDSSLLAHPGALVICKKKRKDREKSAVKSVNGSAGPASPVSFGGNIRSP 948
             GSS+     Q+DS LL HPG LVI KKKRKDREKSA K  +GS+GP SP S G +IRSP
Sbjct: 2121 LGSSSSR--DQDDSPLLTHPGDLVISKKKRKDREKSAAKPRSGSSGPVSPPSMGRSIRSP 2178

Query: 949  GSGSLSKDTRXXXXXXXXXXXXXXXXXXA--XXXXXXXXXWANPVKRIRTDTGKRRPSHL 1122
            G GS+ KD R                  A           WANPVKR+RTD GKRRPSHL
Sbjct: 2179 GPGSMQKDGRSTQQATHQQAWASQPAQQANGGSGGGGTVGWANPVKRMRTDAGKRRPSHL 2238


>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
          Length = 1981

 Score =  329 bits (843), Expect = 1e-87
 Identities = 183/350 (52%), Positives = 225/350 (64%), Gaps = 3/350 (0%)
 Frame = +1

Query: 82   VHASQKPSKVNVLYAPSEDATEHYKESWDSKATYGAGNITGHRMSDGVQRKCKNVMNKFQ 261
            +HAS K  K+N + A +ED  EH +E WD K      N  G RM + +QRKCKNV++K Q
Sbjct: 1660 LHASPKSGKLNCMSARAEDVAEHSREGWDGKVM----NTGGPRMPEIMQRKCKNVISKLQ 1715

Query: 262  RRIDKEGHQIVPLVTELWKKSESTGYMRG--NCQLHIRKIDQRLENFGYNGVMEFVSDVQ 435
            RRIDKEGHQIVPL+T+ WK+ E++GY+ G  N  L +RKIDQR++   Y GVME V DVQ
Sbjct: 1716 RRIDKEGHQIVPLLTDWWKRVENSGYISGPGNNILDLRKIDQRIDRLEYIGVMELVFDVQ 1775

Query: 436  LMLKGAVQFYGFSHEVRTEARKVHDLFFDILKMIFPETDFLEARGAVSFSGHAAS-TSVP 612
             MLK ++Q+YG SHEVR EARKVH+LFF+ILK+ FP+TDF EAR A+SFSG  ++  S P
Sbjct: 1776 QMLKNSMQYYGLSHEVRVEARKVHELFFNILKIAFPDTDFREARNAISFSGPVSTPASAP 1835

Query: 613  PSRKILVGQGKPTQQSNEVDPDLSHRQKPPSHVPHSNEDTRIRSHTPHRETRFGSSNREL 792
              R+  VGQGK  +  NEV+PD       PS  P   EDTR +SH   +E+R GSS+   
Sbjct: 1836 SPRQAAVGQGKRHKPINEVEPD-------PSPPPKQLEDTRAKSHISQKESRLGSSSSR- 1887

Query: 793  GQQEDSSLLAHPGALVICKKKRKDREKSAVKSVNGSAGPASPVSFGGNIRSPGSGSLSKD 972
              Q+DS LL HPG LVI KKKRKDREKSA K  +GS+GP SP S G +IRSPG    S+ 
Sbjct: 1888 -DQDDSPLLTHPGDLVISKKKRKDREKSAAKPRSGSSGPVSPPSMGRSIRSPGPAWASQP 1946

Query: 973  TRXXXXXXXXXXXXXXXXXXAXXXXXXXXXWANPVKRIRTDTGKRRPSHL 1122
             +                            WANPVKR+RTD GKRRPSHL
Sbjct: 1947 AQ---------------QANGGSGGGGTVGWANPVKRMRTDAGKRRPSHL 1981


Top