BLASTX nr result

ID: Angelica22_contig00005412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00005412
         (1938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853...    90   2e-15
ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|157062...    89   5e-15
ref|XP_002318524.1| high mobility group family [Populus trichoca...    87   1e-14
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...    86   4e-14
ref|XP_002321509.1| high mobility group family [Populus trichoca...    82   5e-13

>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
           gi|147815426|emb|CAN74749.1| hypothetical protein
           VITISV_021497 [Vitis vinifera]
           gi|297734307|emb|CBI15554.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 79/240 (32%), Positives = 108/240 (45%), Gaps = 12/240 (5%)
 Frame = +1

Query: 97  PPVVTQLDV-QISDVAVEHTPAQVKNNPPYDEXXXXXXXXXXXXXXXXXMITAAILALKE 273
           PP  ++  V   ++    H P    N+PPY E                 MIT AI AL E
Sbjct: 17  PPAASEAHVAHAANPTPSHGPPH--NHPPYAE-----------------MITTAIGALNE 57

Query: 274 KDGSSRQAIDKFIVNEYKNLSPSHGTLLTYQLKKMKNEGKLVINKHSYMLP---GIEFXX 444
           + GSS++AI K+I   + +L PSH  LLT+ LK++++ G++V+ KHSYMLP         
Sbjct: 58  RTGSSKKAIAKYIERTFGDLPPSHPALLTHHLKRLRSSGQVVMVKHSYMLPRSGDDAHAL 117

Query: 445 XXXXXXXXXXKRGRGRPKKVQANGGGGVVDLEAPPVSAGVIGDSGIV-GNAVPFDPIGAV 621
                     KRGRGRP K +         +   P S  V+   G+V G  VP    G  
Sbjct: 118 PLHPGPVSGPKRGRGRPPKPK---------IPVQPTSESVLVAVGLVDGPVVPKRGPGRP 168

Query: 622 PNVVPI-----GEVDGGTVVKKRPGRPPKSQ--AAMAGGEPIVAAEPIVGAEPISVGRRP 780
           P    +       +DG    K+RPGRPPK+Q    + GG P        G   + V  RP
Sbjct: 169 PKSGGVRGPRPKSLDG---PKRRPGRPPKAQLGGVIPGGVPRERPR-TAGVTKVKVSGRP 224



 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
 Frame = +2

Query: 863  RRPGRPPK-------------VNNGMVEAGNGGSILGKRGRGRPXXXXXXXXXXXXXXXX 1003
            R  GRPPK             V  G+V+    G ++ KRG GRP                
Sbjct: 129  RGRGRPPKPKIPVQPTSESVLVAVGLVD----GPVVPKRGPGRPPKSGGVRGPRPKSLDG 184

Query: 1004 XXXXXXXXXXFRATGMVIGQRPRGRPRKGTVY------RPRGRPRKNVPVNGGGAAFFPV 1165
                       +  G++ G  PR RPR   V       RPRGRP K + V  G      V
Sbjct: 185  PKRRPGRPPKAQLGGVIPGGVPRERPRTAGVTKVKVSGRPRGRPPKILTVGAGVGGGLSV 244

Query: 1166 DGMGDTGRPAKMAVRRNTRKLSGKPLGRP-KKDASARAVKAFNQQHL---LSYQDLKGRV 1333
               G   RP K    +  +KL+G+P+GRP KK A+   + A ++Q +   ++Y+DLK ++
Sbjct: 245  KRRG---RPPKADGPKRPKKLTGRPVGRPRKKLATGEILPAASEQPVAEWMNYEDLKQKL 301

Query: 1334 EHFQSRVKQAVDVILSYVDPEVAPIAVGMLQELQELSLIDLSA 1462
            EH Q ++K +V V+ +    E    A+  LQEL++L+ +D+SA
Sbjct: 302  EHIQGKIKLSVGVLRTQFS-ENNVSAMSALQELEDLATMDISA 343


>ref|NP_001236260.1| HMG I/Y like protein [Glycine max] gi|15706274|emb|CAC69997.1| HMG
           I/Y like protein [Glycine max]
          Length = 413

 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 84/272 (30%), Positives = 117/272 (43%), Gaps = 40/272 (14%)
 Frame = +1

Query: 76  MEAHSDLPPVVTQLDVQISDVAVEHTPAQVKN--NPPYDEXXXXXXXXXXXXXXXXXMIT 249
           M+  S  PP  T +   + + +   TPA   N  +PPYDE                 MI 
Sbjct: 1   MDPTSIPPPPATTVPFTV-EPSNHVTPADNTNTNHPPYDE-----------------MIY 42

Query: 250 AAILALKEKDGSSRQAIDKFIVNEYKNLSPSHGTLLTYQLKKMKNEGKLVINKHSYMLPG 429
            AI ALKEKDGSS++AI K++   YK+L P+H  LLT+ L ++K+ G L++ K SY LPG
Sbjct: 43  TAIGALKEKDGSSKRAIGKYMEQVYKDLPPTHSALLTHHLNRLKSAGLLILVKKSYKLPG 102

Query: 430 IE----------------------------FXXXXXXXXXXXXKRGRGRPKKVQANGGGG 525
            +                                         KRG GRPKK+      G
Sbjct: 103 SDPLPVLQAQKPRGRPPKLKSQPNTELTWPALALNDNPALQSAKRGPGRPKKI-----AG 157

Query: 526 VVDLEAPPVSAGVIG-DSGIVGNAVPFDPIGAVPNVVPIGEVDGGTVVKKRPGRPPKSQ- 699
            V +   P+  G  G   G   + +P  P G  P    +  +  G  +K+RPGRPPK++ 
Sbjct: 158 PVGVSPGPMVPGRRGRPPGTGRSKLPKRP-GRPPKPKSVSAISSG--LKRRPGRPPKAES 214

Query: 700 --------AAMAGGEPIVAAEPIVGAEPISVG 771
                   A +A G P V  +PIV    +  G
Sbjct: 215 NVNVIPFAAPVAPGLPTV--QPIVPTASVPNG 244



 Score = 74.7 bits (182), Expect = 8e-11
 Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 14/214 (6%)
 Frame = +2

Query: 863  RRPGRPPKVNNGMVEAGNGGSILGKRGRGRPXXXXXXXXXXXXXXXXXXXXXXXXXXFRA 1042
            +RPGRPPK  +  V A + G    KR  GRP                             
Sbjct: 184  KRPGRPPKPKS--VSAISSGL---KRRPGRPPKAESNVNVIPFAAPVAPGLPTVQPIVPT 238

Query: 1043 TGMVIGQ-RPRGRPRK-------------GTVYRPRGRPRKNVPVNGGGAAFFPVDGMGD 1180
              +  G  RPRGRP+K             G   R RGRPR  +P             +  
Sbjct: 239  ASVPNGSPRPRGRPKKIVAGAGAPALSSVGGAPRGRGRPRGVLP-------------LVR 285

Query: 1181 TGRPAKMAVRRNTRKLSGKPLGRPKKDASARAVKAFNQQHLLSYQDLKGRVEHFQSRVKQ 1360
             GRP K+AV R  +  + +P+GRPK  ++A A+ A    H  +  DL+ ++EHFQS+VK+
Sbjct: 286  PGRPQKLAVGR-PKNPARRPVGRPK-GSTAAAITA----HKAANDDLRRKLEHFQSKVKE 339

Query: 1361 AVDVILSYVDPEVAPIAVGMLQELQELSLIDLSA 1462
            ++  +  Y + E    A+  +QEL+ LS +DL A
Sbjct: 340  SLGTLKPYFNHESPVTAIAAIQELEVLSTLDLKA 373


>ref|XP_002318524.1| high mobility group family [Populus trichocarpa]
           gi|222859197|gb|EEE96744.1| high mobility group family
           [Populus trichocarpa]
          Length = 369

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 74/216 (34%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
 Frame = +1

Query: 241 MITAAILALKEKDGSSRQAIDKFIVNEYKNLSPSHGTLLTYQLKKMKNEGKLVINKHSYM 420
           MI +AI ALKE+DGSSR AI K+I   Y  LSPSH  LLT+ LK++KN G LV+NK SY+
Sbjct: 54  MIYSAITALKEQDGSSRIAIAKYIERAYPGLSPSHSDLLTHHLKRLKNSGALVLNKKSYL 113

Query: 421 LPGIEF------------------------XXXXXXXXXXXXKRGRGRPKKVQANGGGGV 528
           LP  +                                     KRGRGRP K +ANG    
Sbjct: 114 LPRSDINTDISATITTTATVSTNPPQIQPQYVAPISSAPPEQKRGRGRPPKTKANG---- 169

Query: 529 VDLEAPPVSAGVIGD----SGIVGNAVPFDPIGAVPNVVPIG-EVDGGTVVKKRPGRPPK 693
                PP  A V+ +    +G+  +        +   V  +G  VD  +  +K  GRP K
Sbjct: 170 ----LPPTPASVLANGQPQTGLGSHVSVTAQTQSQLVVSSVGTPVDSTSTGRKGRGRPKK 225

Query: 694 SQAAMAGGEPIVAAE-----PIVGAEPISVGRRPGR 786
                AG  P+V  +     P  G  P+   + PGR
Sbjct: 226 MVVTEAG--PLVVKKGRGRPPNSG--PLGSKKSPGR 257


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 80/255 (31%), Positives = 105/255 (41%), Gaps = 29/255 (11%)
 Frame = +1

Query: 97  PPVVTQLDVQISDVA-----VEHTPAQVKNNPPYDEXXXXXXXXXXXXXXXXXMITAAIL 261
           PPV  +     + VA        T AQ  N+PPY +                 MI AAI 
Sbjct: 39  PPVTAEAAAAHNHVAHAANATAPTVAQSFNHPPYTD-----------------MIYAAIT 81

Query: 262 ALKEKDGSSRQAIDKFIVNEYKNLSPSHGTLLTYQLKKMKNEGKLVINKHSYMLP----- 426
           ALKE+DGSS++AI K+I   Y  L P+H  LLT+ LK++KN G LV+ K SY LP     
Sbjct: 82  ALKERDGSSKRAIAKYIERVYPGLPPTHSALLTHHLKRLKNTGLLVMVKKSYKLPRSDDT 141

Query: 427 -----------------GIEFXXXXXXXXXXXXKRGRGRPKKVQANGGGGVVDLEAPPVS 555
                            G               KRGRGRP K +       +   + P +
Sbjct: 142 VATNNINSSTSNNINAVGHSALPPNPAVTNSGPKRGRGRPPKPKPEVVPSSIQPISQPNA 201

Query: 556 AGVIGDSGIVGNAVPFDPIGAVPNVVP--IGEVDGGTVVKKRPGRPPKSQAAMAGGEPIV 729
           A V+   G+  +  P +   A   + P  +G+   G  VK+  GRP K   A  G    V
Sbjct: 202 ASVMVPVGLSISTQPINSAPAATVIQPPNVGQPQMG--VKRGRGRPKK--VAGGGAAAAV 257

Query: 730 AAEPIVGAEPISVGR 774
                 G  P S GR
Sbjct: 258 LGGKRRGRPPKSAGR 272



 Score = 65.1 bits (157), Expect = 6e-08
 Identities = 65/200 (32%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
 Frame = +2

Query: 863  RRPGRPPKVNNGMVEAGNGGSILG--KRGR-----GRPXXXXXXXXXXXXXXXXXXXXXX 1021
            R  GRP KV  G    G   ++LG  +RGR     GRP                      
Sbjct: 240  RGRGRPKKVAGG----GAAAAVLGGKRRGRPPKSAGRPKKLKSVGANGVKKGPKRLPKSV 295

Query: 1022 XXXXFRATGMVIGQRPRGRPRKGTVYRPRGRPRKNVPVNGGGAAFFPVDGMGDTGRPAKM 1201
                       +  RPRGRP+KG    P   P     V  GGA   P       GRP K+
Sbjct: 296  VVPYATGAAAAVTARPRGRPKKGAA--PAAAPGVGGVVGIGGAVVVPGKR---AGRPPKV 350

Query: 1202 A--VRRNTRKLSGKPLGRPKK-DASARAVKAFNQQHLLSYQDLKGRVEHFQSRVKQAVDV 1372
               V  N +K   +P+GRPKK D  + A    +Q    +Y DLK + E FQS+V+QAV V
Sbjct: 351  VGGVVVNPKK---RPVGRPKKNDNVSWAAAQASQLQSEAYGDLKMKFEFFQSKVRQAVGV 407

Query: 1373 ILSYVDPEVAPIAVGMLQEL 1432
            +   +  E     V  +QEL
Sbjct: 408  LRPQLTNETPISVVAAIQEL 427


>ref|XP_002321509.1| high mobility group family [Populus trichocarpa]
           gi|118481017|gb|ABK92462.1| unknown [Populus
           trichocarpa] gi|118487368|gb|ABK95512.1| unknown
           [Populus trichocarpa] gi|222868505|gb|EEF05636.1| high
           mobility group family [Populus trichocarpa]
          Length = 478

 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 66/190 (34%), Positives = 82/190 (43%), Gaps = 38/190 (20%)
 Frame = +1

Query: 241 MITAAILALKEKDGSSRQAIDKFIVNEYKNLSPSHGTLLTYQLKKMKNEGKLVINKHSYM 420
           MI +AI ALKE+DGSSR AI K+I   Y  L  +H  LLT+ LK++KN G LV+NK SYM
Sbjct: 54  MIYSAITALKEQDGSSRIAIAKYIERAYPGLPSNHSDLLTHHLKRLKNSGALVLNKKSYM 113

Query: 421 LPGIEF---------------------XXXXXXXXXXXXKRGRGRPKKVQANGGGGVVDL 537
           LP  +                                  KRGRGRP K + NG    +  
Sbjct: 114 LPRSDSNANITTTTPTVSTSPTQIQPQYAVPVSSAPPEQKRGRGRPPKAKLNG----LTP 169

Query: 538 EAPPVSAGVIGDSGIVGN----------AVPFDPIGAV-------PNVVPIGEVDGGTVV 666
              PV A     +G+  N            P DP  +        P  V + E  G   V
Sbjct: 170 TPAPVLANGQAQTGLGLNVGVTAQPLSVGFPIDPTSSTVKKGRGRPKKVAVTEA-GPLAV 228

Query: 667 KKRPGRPPKS 696
            K  GRPPK+
Sbjct: 229 NKGKGRPPKT 238



 Score = 70.5 bits (171), Expect = 2e-09
 Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
 Frame = +2

Query: 1100 RPRGRPRKNVPVNGGGAAFFPVDGMGDTGRPAKMAV--RRNTRKLSGKPLGRPKKDASA- 1270
            RPRGRPRK   +   G     V      GRP K+ V  +   +K SG+P+GRP+K+A+A 
Sbjct: 302  RPRGRPRKGAALAAAGVGAVVVQAKRP-GRPPKLPVIMKPKPKKSSGRPVGRPRKNANAP 360

Query: 1271 ----RAVKAFNQQHLLSYQDLKGRVEHFQSRVKQAVDVILSYVDPEVAPIAVGMLQELQE 1438
                RA +   Q  L  + DLK ++E FQSRVKQA+ V+  ++       AV  +QEL+ 
Sbjct: 361  WAITRASEPQAQAEL--HGDLKRKLEFFQSRVKQAIGVLKPHLTSATIS-AVAAIQELEG 417

Query: 1439 LSLIDLS 1459
            L+ +D++
Sbjct: 418  LASMDIN 424


Top