BLASTX nr result

ID: Anemarrhena21_contig00053943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00053943
         (519 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004969967.1| PREDICTED: uncharacterized protein LOC101778...    63   9e-08
ref|XP_002456364.1| hypothetical protein SORBIDRAFT_03g034760 [S...    57   4e-06

>ref|XP_004969967.1| PREDICTED: uncharacterized protein LOC101778549 [Setaria italica]
          Length = 448

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
 Frame = -2

Query: 362 TCASLPLLG-SCTNLRTLKLERVSISDRLLNNI-ASSCQFXXXXXXXXXXXLTG----IW 201
           TCA  P    +C  LRTL+L RV+I   ++N I AS+               TG      
Sbjct: 149 TCAVPPWSDVACPCLRTLRLHRVAIHQEVINKILASASCLDTLEMVYCTGLGTGKAGSCT 208

Query: 200 IHSPRLKYLVLWPAMGAVEIYIDAPSLEMLTLYTRPKVDKLRII-APKV*KAFIHLAKP 27
           + S  ++ LV  P +   +I I AP+L  +TLYTR KV +L ++ AP V KA++H+AKP
Sbjct: 209 VESSSVRNLVFRPTLKLEQITIRAPALRTVTLYTRGKVKRLELVPAPDVRKAYLHIAKP 267


>ref|XP_002456364.1| hypothetical protein SORBIDRAFT_03g034760 [Sorghum bicolor]
           gi|241928339|gb|EES01484.1| hypothetical protein
           SORBIDRAFT_03g034760 [Sorghum bicolor]
          Length = 451

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
 Frame = -2

Query: 371 AFATCASLPLLG-SCTNLRTLKLERVSISDRLLNNIASSCQF---XXXXXXXXXXXLTGI 204
           A  TCA  P    SC  LRTL+L RV+I    +N I +S  F                G 
Sbjct: 144 ALDTCAVPPWSDVSCPCLRTLRLHRVAIHQENINKILASASFLDTLEMVYCTGHGASKGC 203

Query: 203 WIHSPRLKYLVLWPAMGAVEIYIDAPSLEMLTLYTRPKVDKLRII-APKV*KAFIHLAKP 27
            + S  +K LV  P +      I A  L +LTLYTR +   L +  AP++ K ++H++KP
Sbjct: 204 TVESSSVKNLVFRPTLKLEGTVIRASGLRVLTLYTRSRAKSLELAPAPEIRKVYLHISKP 263


Top