BLASTX nr result

ID: Anemarrhena21_contig00053422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00053422
         (816 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011024024.1| PREDICTED: pentatricopeptide repeat-containi...    47   4e-06
ref|XP_002322250.2| hypothetical protein POPTR_0015s10720g [Popu...    47   5e-06
ref|XP_008784651.1| PREDICTED: pentatricopeptide repeat-containi...    43   9e-06

>ref|XP_011024024.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Populus euphratica]
          Length = 704

 Score = 47.0 bits (110), Expect(2) = 4e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = -3

Query: 352 SIYDSLVTTCVGLQLA*DAIFVFLYQIDNLFEFDQYFKNLIVL 224
           S YD+LV  C+GL+       VF Y IDN FEFDQY +N ++L
Sbjct: 132 STYDALVNACIGLRSVRGVKRVFNYMIDNGFEFDQYMRNRVLL 174



 Score = 31.6 bits (70), Expect(2) = 4e-06
 Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -2

Query: 197 DACWLFDEMFERNSFS*NTMIS-LFLLGSFAETSDLF 90
           DA  LFDEM ERN  S NT+IS L  +G F E   LF
Sbjct: 184 DARGLFDEMPERNLVSWNTIISGLVDVGDFLEAFRLF 220


>ref|XP_002322250.2| hypothetical protein POPTR_0015s10720g [Populus trichocarpa]
           gi|550322450|gb|EEF06377.2| hypothetical protein
           POPTR_0015s10720g [Populus trichocarpa]
          Length = 704

 Score = 47.0 bits (110), Expect(2) = 5e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%)
 Frame = -3

Query: 352 SIYDSLVTTCVGLQLA*DAIFVFLYQIDNLFEFDQYFKNLIVL 224
           S YD+LV  C+GL+       VF Y IDN FEFDQY +N ++L
Sbjct: 132 STYDALVNACIGLRSVRGVKRVFNYMIDNGFEFDQYMRNRVLL 174



 Score = 31.2 bits (69), Expect(2) = 5e-06
 Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = -2

Query: 197 DACWLFDEMFERNSFS*NTMIS-LFLLGSFAETSDLF 90
           DA  LFDEM ERN  S NT+IS L  +G F E   LF
Sbjct: 184 DARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 220


>ref|XP_008784651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Phoenix dactylifera]
           gi|672122632|ref|XP_008784652.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Phoenix dactylifera]
           gi|672122634|ref|XP_008784653.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Phoenix dactylifera]
           gi|672122636|ref|XP_008784654.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Phoenix dactylifera]
           gi|672122638|ref|XP_008784655.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Phoenix dactylifera]
           gi|672122640|ref|XP_008784656.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Phoenix dactylifera]
           gi|672122642|ref|XP_008784657.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Phoenix dactylifera]
          Length = 709

 Score = 43.1 bits (100), Expect(2) = 9e-06
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = -3

Query: 355 ASIYDSLVTTCVGLQLA*DAIFVFLYQIDNLFEFDQYFKNLIVLKCLE 212
           AS YDSLV  CV L+       VF + I++ FEFDQY +N ++L  L+
Sbjct: 135 ASTYDSLVNACVNLRSVGAVKTVFRHMIESGFEFDQYMRNRVLLMHLK 182



 Score = 34.3 bits (77), Expect(2) = 9e-06
 Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = -2

Query: 203 IPDACWLFDEMFERNSFS*NTMIS-LFLLGSFAETSDLF 90
           + DA  LFDEM ERN  S NTMI+ L   GS+ E  DLF
Sbjct: 186 LADARRLFDEMPERNIVSLNTMITGLVDSGSYEEAFDLF 224


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