BLASTX nr result

ID: Anemarrhena21_contig00053315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00053315
         (340 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      138   2e-30
ref|XP_010248714.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    72   2e-10
ref|XP_010927551.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    65   2e-08
ref|XP_010932264.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    64   5e-08
ref|XP_010250975.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    62   2e-07
ref|XP_002270233.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    61   3e-07
ref|XP_008807479.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    60   6e-07
ref|XP_008807478.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    60   6e-07
ref|XP_008797077.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    59   2e-06
ref|XP_002278832.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    58   2e-06
emb|CBI14910.3| unnamed protein product [Vitis vinifera]               56   8e-06

>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  138 bits (347), Expect = 2e-30
 Identities = 75/102 (73%), Positives = 75/102 (73%)
 Frame = -2

Query: 306 MVPSSPILFSSKPPCPFLPIPSKPIKLNHLSTSSSSWVYFXXXXXXXXXXXXXLVAQTSD 127
           MVPSSPILFSSKPPCPFLPIPSKPIKL HLSTSSSSWV F             LVAQTSD
Sbjct: 1   MVPSSPILFSSKPPCPFLPIPSKPIKLIHLSTSSSSWVSFKKSPSPSSRSLTTLVAQTSD 60

Query: 126 WAQQEEDSNVAEATLSDWXXXXXXXXXXXGQTESGAEDGEES 1
           WAQQEEDSNVAEATLSDW            QTESGAEDGEES
Sbjct: 61  WAQQEEDSNVAEATLSDW--EGEGEGEGEEQTESGAEDGEES 100


>ref|XP_010248714.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Nelumbo
           nucifera]
          Length = 330

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 56/129 (43%), Positives = 64/129 (49%), Gaps = 21/129 (16%)
 Frame = -2

Query: 324 LFKPFPM----VPSSPILFSSKPPCPFLPIPSKPIKLNHLSTSSSSWV--YFXXXXXXXX 163
           LFK  PM    + S P LF++K   PFL +PSKPIKL HLS SSSS +  +         
Sbjct: 8   LFKTVPMADRYLTSLPTLFTTKTSSPFLSLPSKPIKLLHLSCSSSSSLPSWMSLKKKLSS 67

Query: 162 XXXXXLVAQTSDWAQQEEDSNV--------------AEATLSDWXXXXXXXXXXXGQTES 25
                LVAQTSDWAQQEE++ V               EA LSDW             TE 
Sbjct: 68  STIIALVAQTSDWAQQEEENEVEEEGFNWENQEGEETEARLSDW-----EGEGEDAATEG 122

Query: 24  GA-EDGEES 1
            A EDGEES
Sbjct: 123 SAPEDGEES 131


>ref|XP_010927551.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Elaeis
           guineensis]
          Length = 336

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 47/118 (39%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
 Frame = -2

Query: 336 SATHLFKPFPM----VPSSPILFSSKPPCPFLPIPSKPIKLNHLSTSSSSWVYFXXXXXX 169
           SA   FKP  M    +PS   +FS KP  PFLP+PSKP++L HLS S S           
Sbjct: 2   SAAPAFKPLSMGDGCLPSLRTIFSPKPSSPFLPLPSKPLRLLHLSFSFSPSSLPAFLSTQ 61

Query: 168 XXXXXXXLVAQTSDWAQQEEDSNV-AEATLSDWXXXXXXXXXXXGQTESGAE--DGEE 4
                  LVAQTSDWAQ+EE++ V +EA + +              TE+G    +GEE
Sbjct: 62  KKLPLIPLVAQTSDWAQREEENEVESEAFVLEGEEEPELQEGEEEGTEAGLSELEGEE 119


>ref|XP_010932264.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Elaeis
           guineensis]
          Length = 333

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 43/87 (49%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
 Frame = -2

Query: 336 SATHLFKPFPMV----PSSPILFSSKPPCPFLPIPSKPIKLNHLSTSSSS---WVYFXXX 178
           +A   FKP  MV    PS    FSSKP  PFLPIP KP++L HLS SSSS          
Sbjct: 2   TAAPAFKPLSMVEGCLPSLSTQFSSKPSHPFLPIPPKPLRLLHLSFSSSSSSPSSLPPFL 61

Query: 177 XXXXXXXXXXLVAQTSDWAQQEEDSNV 97
                     LVAQTSDWAQQEE++ V
Sbjct: 62  STQKKLSLIPLVAQTSDWAQQEEENEV 88


>ref|XP_010250975.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Nelumbo
           nucifera]
          Length = 330

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 52/134 (38%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
 Frame = -2

Query: 339 SSATHLFKPFPM----VPSSPILFSSKPPCPFLPIPSKPIKLNHLSTSSSSWVY---FXX 181
           S  T L KP  M    + S   LF  K    FL +PSKPIK  HLS SSSS  +      
Sbjct: 3   SVTTSLVKPLSMADGCLSSISTLFIPKASHHFLSLPSKPIKFLHLSCSSSSLPFPSCVSL 62

Query: 180 XXXXXXXXXXXLVAQTSDWAQQEEDSNV--------------AEATLSDWXXXXXXXXXX 43
                      LVAQTSDWAQQEE++ +               EA LSDW          
Sbjct: 63  RKKFSSSNVIALVAQTSDWAQQEEENEIEEEGLNWENQEGEETEALLSDW----EGEADD 118

Query: 42  XGQTESGAEDGEES 1
               ESG EDG ES
Sbjct: 119 SATEESGVEDGAES 132


>ref|XP_002270233.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 48/123 (39%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
 Frame = -2

Query: 339 SSATHLFKPFPMVPSS-----PILFSSKPPCPFLPIPSKPIKLNHLSTS-SSSWVYFXXX 178
           +S+  L KPF M  S        LF++K P P L +P KP++L HLS S SSSWV     
Sbjct: 2   ASSNALLKPFSMAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWV--SLK 59

Query: 177 XXXXXXXXXXLVAQTSDWAQQEEDSNVAEATLSDWXXXXXXXXXXXGQTESG----AEDG 10
                      VAQTSDWAQQEE+      T   W           G  E+      EDG
Sbjct: 60  TKTSPTTLVPFVAQTSDWAQQEEEEEKGGLT---WDSEGGEEIEASGSEEAWEGEVGEDG 116

Query: 9   EES 1
           EES
Sbjct: 117 EES 119


>ref|XP_008807479.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like isoform X2
           [Phoenix dactylifera]
          Length = 287

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
 Frame = -2

Query: 336 SATHLFKPFPMV----PSSPILFSSKPPCPFLPIPSKPIKLNHL----STSSSSWVYFXX 181
           +AT  FKP  MV    PS   LFSSKP   FLP+P KP++  HL    S+SSS       
Sbjct: 2   TATLTFKPLSMVEGCLPSLTTLFSSKPSYTFLPLPPKPLRHLHLSFSFSSSSSPSSLPPF 61

Query: 180 XXXXXXXXXXXLVAQTSDWAQQEEDSNV 97
                      LVAQTSDWAQQEE++ V
Sbjct: 62  LSAQKKPSWIPLVAQTSDWAQQEEENEV 89


>ref|XP_008807478.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like isoform X1
           [Phoenix dactylifera]
          Length = 321

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
 Frame = -2

Query: 336 SATHLFKPFPMV----PSSPILFSSKPPCPFLPIPSKPIKLNHL----STSSSSWVYFXX 181
           +AT  FKP  MV    PS   LFSSKP   FLP+P KP++  HL    S+SSS       
Sbjct: 2   TATLTFKPLSMVEGCLPSLTTLFSSKPSYTFLPLPPKPLRHLHLSFSFSSSSSPSSLPPF 61

Query: 180 XXXXXXXXXXXLVAQTSDWAQQEEDSNV 97
                      LVAQTSDWAQQEE++ V
Sbjct: 62  LSAQKKPSWIPLVAQTSDWAQQEEENEV 89


>ref|XP_008797077.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Phoenix
           dactylifera] gi|672110746|ref|XP_008797085.1| PREDICTED:
           28 kDa ribonucleoprotein, chloroplastic-like [Phoenix
           dactylifera]
          Length = 368

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
 Frame = -2

Query: 336 SATHLFKPFPM----VPSSPILFSSKPPCPFL-PIPSKPIKLNHLSTSSSSWVYFXXXXX 172
           +A   FKP  M    +PS   LFSSKP  PFL P PSKP++L H+S SS +         
Sbjct: 2   TAAPAFKPLSMGDRCLPSLRTLFSSKPSNPFLLPPPSKPLRLLHVSFSSPASSLPTFLST 61

Query: 171 XXXXXXXXLVAQTSDWAQQEEDSNV 97
                    VAQTSDWA+QEE++ V
Sbjct: 62  RKKLLLIPRVAQTSDWARQEEENEV 86


>ref|XP_002278832.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
          Length = 327

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 52/140 (37%), Positives = 61/140 (43%), Gaps = 27/140 (19%)
 Frame = -2

Query: 339 SSATH-LFKPFPMVPSSPI----LFSSKPPCPFLPIPS-KPIKLNHLSTSSSSWVY--FX 184
           SSATH L KPF +   SPI    +FS+K P  +LPIP  KPIKL  LS S SS       
Sbjct: 2   SSATHHLLKPFSIPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLL-LSCSQSSLFSPSLF 60

Query: 183 XXXXXXXXXXXXLVAQTSDWAQQEEDSNV-------------------AEATLSDWXXXX 61
                        VAQTSDWAQQEED+ V                    +A  SDW    
Sbjct: 61  LKSKTLSSSVVTFVAQTSDWAQQEEDNTVIIEEEQEEKVTWENEEVEGPDAQASDWESEG 120

Query: 60  XXXXXXXGQTESGAEDGEES 1
                     +   +DGE+S
Sbjct: 121 EGAVTEAISDDGVVDDGEDS 140


>emb|CBI14910.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 44/89 (49%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
 Frame = -2

Query: 339 SSATH-LFKPFPMVPSSPI----LFSSKPPCPFLPIPS-KPIKLNHLSTSSSSWVY--FX 184
           SSATH L KPF +   SPI    +FS+K P  +LPIP  KPIKL  LS S SS       
Sbjct: 2   SSATHHLLKPFSIPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLL-LSCSQSSLFSPSLF 60

Query: 183 XXXXXXXXXXXXLVAQTSDWAQQEEDSNV 97
                        VAQTSDWAQQEED+ V
Sbjct: 61  LKSKTLSSSVVTFVAQTSDWAQQEEDNTV 89


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