BLASTX nr result
ID: Anemarrhena21_contig00053290
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00053290
(447 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 79 2e-19
emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group] 77 2e-19
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group] 75 2e-19
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 75 3e-19
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap... 75 3e-19
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc... 76 3e-19
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 76 3e-19
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-... 76 3e-19
gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-... 76 3e-19
gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group... 76 3e-19
gb|ABA97555.1| retrotransposon protein, putative, Ty1-copia subc... 76 3e-19
gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subc... 75 4e-19
gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subc... 75 4e-19
emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group] 75 4e-19
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 79 4e-19
emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group] 75 4e-19
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc... 75 6e-19
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 75 6e-19
gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subc... 75 6e-19
gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subc... 75 6e-19
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 79.0 bits (193), Expect(2) = 2e-19
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 207 YGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGPK 386
+GEA+L AN++LN VP K++ TP++LW G +MWGCLA + +P ++ GPK
Sbjct: 656 WGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPK 715
Query: 387 TNRCVLFGFAENSDTCRF 440
T C+ G+A NS+ RF
Sbjct: 716 TIDCIFIGYAHNSNAYRF 733
Score = 43.5 bits (101), Expect(2) = 2e-19
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 82 EHSIIAEIA-PYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
+H II E PYSPQS+G+A+ K TL E++ +MLI+F L
Sbjct: 612 QHGIIHETTTPYSPQSNGVAERKNRTLKEMMNAMLISFSL 651
>emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 76.6 bits (187), Expect(2) = 2e-19
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N++LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNYVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 45.4 bits (106), Expect(2) = 2e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614
>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 75.1 bits (183), Expect(2) = 2e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKHKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 47.0 bits (110), Expect(2) = 2e-19
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIAK K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHERTPPYSPESNGIAKRKNRTLTDLVNAMLDTAGL 614
>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 75.1 bits (183), Expect(2) = 3e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 579 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 638
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 639 KTVDCVFLGYAHHSIAYRF 657
Score = 46.6 bits (109), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAEIAP-YSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E+ P YSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 527 SNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 575
>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1274
Score = 75.1 bits (183), Expect(2) = 3e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 46.6 bits (109), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAEIAP-YSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E+ P YSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614
>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 75.9 bits (185), Expect(2) = 3e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 834 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGP 893
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 894 KTVDCVFLGYAHHSIAYRF 912
Score = 45.4 bits (106), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 782 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 830
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 75.9 bits (185), Expect(2) = 3e-19
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L ++WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRIWGCLAKVNVPITKKRKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 45.4 bits (106), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614
>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1302
Score = 75.9 bits (185), Expect(2) = 3e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 45.4 bits (106), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614
>gb|AAX92828.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|62733724|gb|AAX95834.1|
retrotransposon protein, putative, Ty1-copia sub-class
[Oryza sativa Japonica Group] gi|77550359|gb|ABA93156.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1277
Score = 75.9 bits (185), Expect(2) = 3e-19
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G + L + WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKSSLSYLRTWGCLAKVNVPITKKRKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 45.4 bits (106), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614
>gb|AAV43866.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168291|gb|AAV44157.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1046
Score = 75.9 bits (185), Expect(2) = 3e-19
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA I +P ++ GP
Sbjct: 362 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKINVPITKKRKLGP 421
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 422 KTMDCVFLGYAHHSIAYRF 440
Score = 45.4 bits (106), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 310 SNEFDLFCKEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 358
>gb|ABA97555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 634
Score = 75.9 bits (185), Expect(2) = 3e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 274 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPLLSYLRTWGCLAKVNVPITKKRKLGP 333
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 334 KTVDCVFLGYAHHSIAYRF 352
Score = 45.4 bits (106), Expect(2) = 3e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 222 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 270
>gb|ABA96779.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 75.1 bits (183), Expect(2) = 4e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 705 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 764
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 765 KTVDCVFLGYAHHSIAYRF 783
Score = 45.8 bits (107), Expect(2) = 4e-19
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGLLAT 207
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL T
Sbjct: 653 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKT 704
>gb|ABA98555.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 75.1 bits (183), Expect(2) = 4e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 703 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 762
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 763 KTVDCVFLGYAHHSIAYRF 781
Score = 45.8 bits (107), Expect(2) = 4e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 651 SNEFDLFFEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 699
>emb|CAD40924.3| OSJNBa0033G16.12 [Oryza sativa Japonica Group]
Length = 1320
Score = 75.1 bits (183), Expect(2) = 4e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 45.8 bits (107), Expect(2) = 4e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTVGL 614
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 79.0 bits (193), Expect(2) = 4e-19
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 207 YGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGPK 386
+GEA+L AN++LN VP K++ TP++LW G +MWGCLA + +P ++ GPK
Sbjct: 656 WGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPK 715
Query: 387 TNRCVLFGFAENSDTCRF 440
T C+ G+A NS+ RF
Sbjct: 716 TIDCIFIGYAHNSNAYRF 733
Score = 42.0 bits (97), Expect(2) = 4e-19
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 82 EHSIIAEI-APYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
+H II E APYSPQS+G+A+ K TL E++ +MLI+ L
Sbjct: 612 QHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSL 651
>emb|CAE03994.1| OSJNBb0089B03.8 [Oryza sativa Japonica Group]
Length = 1113
Score = 75.1 bits (183), Expect(2) = 4e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 411 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 470
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 471 KTVDCVFLGYAHHSIAYRF 489
Score = 45.8 bits (107), Expect(2) = 4e-19
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 1 SSKETHKR*RWQVPIKERSKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKS 177
S+K + KR R + S E + EH II E PYSP+S+GIA+ K TLT++V +
Sbjct: 341 SNKTSIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNA 400
Query: 178 MLITFGL 198
ML T GL
Sbjct: 401 MLDTAGL 407
>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 75.1 bits (183), Expect(2) = 6e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 813 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 872
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 873 KTVDCVFLGYAHHSIAYRF 891
Score = 45.4 bits (106), Expect(2) = 6e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 761 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 809
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 75.1 bits (183), Expect(2) = 6e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 618 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 677
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 678 KTVDCVFLGYAHHSIAYRF 696
Score = 45.4 bits (106), Expect(2) = 6e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 566 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 614
>gb|ABA99751.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 75.1 bits (183), Expect(2) = 6e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 1103 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 1162
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 1163 KTVDCVFLGYAHHSIAYRF 1181
Score = 45.4 bits (106), Expect(2) = 6e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 1051 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 1099
>gb|ABA93737.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1579
Score = 75.1 bits (183), Expect(2) = 6e-19
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3
Query: 204 YYGEALLMANWILNLVPYSKSDTTPHQLWLGYSTFLDNPKMWGCLAYIRLPDIRRPNFGP 383
++GEALL +N +LN VP D TP+++W+G L + WGCLA + +P ++ GP
Sbjct: 904 WWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGP 963
Query: 384 KTNRCVLFGFAENSDTCRF 440
KT CV G+A +S RF
Sbjct: 964 KTVDCVFLGYAHHSIAYRF 982
Score = 45.4 bits (106), Expect(2) = 6e-19
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 55 SKEAEA*LNEHSIIAE-IAPYSPQSSGIAKTKKHTLTEIVKSMLITFGL 198
S E + EH II E PYSP+S+GIA+ K TLT++V +ML T GL
Sbjct: 852 SNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGL 900