BLASTX nr result
ID: Anemarrhena21_contig00051067
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00051067
(227 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 42 2e-07
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 42 2e-07
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 42 4e-07
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 40 5e-07
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 46 9e-07
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766... 43 9e-07
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 40 1e-06
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 40 1e-06
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 40 1e-06
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 40 1e-06
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 40 1e-06
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 40 1e-06
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 40 2e-06
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 40 2e-06
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 39 2e-06
gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposo... 44 2e-06
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 39 3e-06
emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis] 39 3e-06
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 42 4e-06
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -3
Query: 183 NKDPYDILTK-SGKAKFSDAWLLDSGCTYHMCP 88
NK ++L +G + SD WLLD+GCTYHMCP
Sbjct: 222 NKPDAELLVAYAGCVQTSDEWLLDTGCTYHMCP 254
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+P GG V+MG++ CK+ G+G
Sbjct: 256 RDWFTTYEPVQGGNVLMGDNTPCKVAGVG 284
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 41.6 bits (96), Expect(2) = 2e-07
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF +++ DGG+V MGND CK VGIG
Sbjct: 238 RDWFFEFQELDGGVVYMGNDNPCKTVGIG 266
Score = 40.0 bits (92), Expect(2) = 2e-07
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 165 ILTKSGKAKFSDAWLLDSGCTYHMCP 88
++ + + D W+LDSGCTYHMCP
Sbjct: 211 LIVSLSASSYPDEWILDSGCTYHMCP 236
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 41.6 bits (96), Expect(2) = 4e-07
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF +++ DGG+V MGND CK VGIG
Sbjct: 239 RDWFFEFQELDGGVVYMGNDNPCKTVGIG 267
Score = 38.9 bits (89), Expect(2) = 4e-07
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3
Query: 138 FSDAWLLDSGCTYHMCP 88
+ D W+LDSGCTYHMCP
Sbjct: 221 YLDEWILDSGCTYHMCP 237
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 40.0 bits (92), Expect(2) = 5e-07
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 165 ILTKSGKAKFSDAWLLDSGCTYHMCP 88
++ + + D W+LDSGCTYHMCP
Sbjct: 251 LIVSLSASSYPDEWILDSGCTYHMCP 276
Score = 40.0 bits (92), Expect(2) = 5e-07
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF +++ DGG+V MGND CK GIG
Sbjct: 278 RDWFFEFQELDGGVVYMGNDNPCKTAGIG 306
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 46.2 bits (108), Expect(2) = 9e-07
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -2
Query: 85 EWFCKYKPYDGGLVMMGNDVACKIVGI 5
+WF Y+P DGG V+MGN VACK+VGI
Sbjct: 250 DWFSTYQPIDGGKVLMGNKVACKVVGI 276
Score = 33.1 bits (74), Expect(2) = 9e-07
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 132 DAWLLDSGCTYHMCP 88
D W+LDSGC+YHM P
Sbjct: 233 DEWILDSGCSYHMSP 247
>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
raimondii]
Length = 217
Score = 42.7 bits (99), Expect(2) = 9e-07
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
K+WF K +GG+V MGND ACK +G+G
Sbjct: 22 KDWFSSLKELEGGIVFMGNDSACKTMGVG 50
Score = 36.6 bits (83), Expect(2) = 9e-07
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 135 SDAWLLDSGCTYHMCP 88
+D W+LD GCTYHMCP
Sbjct: 5 TDEWILDLGCTYHMCP 20
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 219 GKSDQERFTE*LNKDPYD---ILTKSGKAKFSDAWLLDSGCTYHMCP 88
GK ++E + + D ++ +G A+ SD W+LD+ CTYHMCP
Sbjct: 175 GKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCP 221
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 223 RDWFATYEAVQGGTVLMGDDTPCEVAGIG 251
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 219 GKSDQERFTE*LNKDPYD---ILTKSGKAKFSDAWLLDSGCTYHMCP 88
GK ++E + + D ++ +G A+ SD W+LD+ CTYHMCP
Sbjct: 208 GKKEEEGKAAIVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCP 254
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 256 RDWFATYEAVQGGTVLMGDDTPCEVAGIG 284
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 219 GKSDQERFTE*LNKDPYD---ILTKSGKAKFSDAWLLDSGCTYHMCP 88
GK ++E + + D ++ +G A+ SD W+LD+ CTYHMCP
Sbjct: 98 GKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCP 144
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 146 RDWFATYEAVQGGTVLMGDDTPCEVAGIG 174
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 219 GKSDQERFTE*LNKDPYD---ILTKSGKAKFSDAWLLDSGCTYHMCP 88
GK ++E + + D ++ +G A+ SD W+LD+ CTYHMCP
Sbjct: 98 GKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCP 144
Score = 38.9 bits (89), Expect(2) = 1e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 146 RDWFATYEAVQGGTVLMGDDTPCEVAGIG 174
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 40.4 bits (93), Expect(2) = 1e-06
Identities = 13/28 (46%), Positives = 23/28 (82%)
Frame = -2
Query: 85 EWFCKYKPYDGGLVMMGNDVACKIVGIG 2
+WF Y+ ++GG V++GN+++C +VGIG
Sbjct: 63 DWFSSYQEFNGGNVLLGNNMSCSVVGIG 90
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3
Query: 132 DAWLLDSGCTYHMCPR 85
+ W+LDSGCTYHMCPR
Sbjct: 46 EEWVLDSGCTYHMCPR 61
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 40.0 bits (92), Expect(2) = 1e-06
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 219 GKSDQERFTE*LNKDPYD---ILTKSGKAKFSDAWLLDSGCTYHMCP 88
GK ++E + + D ++ +G A+ SD W+LD+ CTYHMCP
Sbjct: 266 GKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSDQWILDTACTYHMCP 312
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 314 RDWFATYEVVQGGTVLMGDDTPCEVAGIG 342
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -3
Query: 165 ILTKSGKAKFSDAWLLDSGCTYHMCP 88
++ +G A+ SD W+LD+ CTYHMCP
Sbjct: 272 LVAYAGCAQTSDQWILDTACTYHMCP 297
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 299 RDWFATYEVVQGGTVLMGDDTPCEVAGIG 327
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -3
Query: 165 ILTKSGKAKFSDAWLLDSGCTYHMCP 88
++ +G A+ SD W+LD+ CTYHMCP
Sbjct: 104 LVAYAGCAQTSDQWILDTACTYHMCP 129
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 131 RDWFATYEVVQGGTVLMGDDTPCEVAGIG 159
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 222 SGKSDQERFTE*LNKDPYD---ILTKSGKAKFSDAWLLDSGCTYHMCP 88
+GK ++E + + D ++ G A+ SD W+LD+ CTYHMCP
Sbjct: 231 AGKKEEEGKAAVVTDEKSDAELLVAYVGCAQTSDQWILDTACTYHMCP 278
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG+D C++ GIG
Sbjct: 280 RDWFATYETVQGGTVLMGDDTPCEVAGIG 308
>gb|KHN13665.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2
Query: 85 EWFCKYKPYDGGLVMMGNDVACKIVGIG 2
EWF YK DGG V+MGN++ C ++GIG
Sbjct: 296 EWFSSYKEIDGGKVLMGNNMVCNVIGIG 323
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -3
Query: 168 DILTKSGKAKFSDAWLLDSGCTYHMCP 88
++L+ S K K S+ W+LDSGC++HM P
Sbjct: 268 EVLSISTK-KHSEEWILDSGCSFHMTP 293
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 38.9 bits (89), Expect(2) = 3e-06
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ +GG +++GN+++C +VGIG
Sbjct: 192 RDWFSSYQEVNGGKLLLGNNMSCNVVGIG 220
Score = 38.5 bits (88), Expect(2) = 3e-06
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3
Query: 132 DAWLLDSGCTYHMCPR 85
+ W+LDSGCTYHMCPR
Sbjct: 176 EEWVLDSGCTYHMCPR 191
>emb|CBG76256.1| OO_Ba0005L10-OO_Ba0081K17.7 [Oryza officinalis]
Length = 565
Score = 38.9 bits (89), Expect(2) = 3e-06
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3
Query: 150 GKAKFSDAWLLDSGCTYHMCP 88
G A+ SD W+LD+ CTYHMCP
Sbjct: 217 GCAQTSDQWILDTACTYHMCP 237
Score = 38.5 bits (88), Expect(2) = 3e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WF Y+ GG V+MG++ CK+VGIG
Sbjct: 239 RDWFVTYEFVQGGTVLMGDNTLCKVVGIG 267
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 41.6 bits (96), Expect(2) = 4e-06
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -2
Query: 88 KEWFCKYKPYDGGLVMMGNDVACKIVGIG 2
++WFC Y+P G V MGND A +IVGIG
Sbjct: 305 RDWFCTYEPVSEGNVFMGNDHALEIVGIG 333
Score = 35.4 bits (80), Expect(2) = 4e-06
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -3
Query: 162 LTKSGKAKFSDAWLLDSGCTYHMCPR 85
++ GK + +D W++DSG T+HM PR
Sbjct: 279 VSTKGKNRLTDVWIVDSGATWHMTPR 304