BLASTX nr result

ID: Anemarrhena21_contig00049769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00049769
         (328 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]    73   7e-11
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...    60   8e-07
gb|KMQ89046.1| integrase core domain protein [Lasius niger]            57   6e-06
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         57   6e-06

>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
          Length = 347

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
 Frame = +3

Query: 12  DSGQVLFTKEKSNNESSKCNLKHKNLMCNWCHKKGHIRVDC*THKKK----------QQD 161
           + G+  F  E SNN+S   + K K++ C  C KKGH++ DC   KK+           + 
Sbjct: 96  ERGRNKFRSESSNNKSRSKSKKRKDIQCYKCGKKGHMKRDCPEKKKRGSVSENKEGSSKS 155

Query: 162 ANVIELTEGDEYTCDVLSVTNDSVNTKDRWISDFGCSQHISSNKKMFSLYTSV 320
           ANV+   + +    D+LSV++ S +  D WI D  CS H++ NK  F+ Y SV
Sbjct: 156 ANVVTEEDSESGDGDMLSVSSSSDHLTDSWILDSTCSYHMTPNKDWFNTYRSV 208


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
           subsp. vulgaris]
          Length = 2676

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
 Frame = +3

Query: 36  KEKSNNESSKCNLKHKNLMCNWCHKKGHIRVDC*THKKKQQDANVIELTEGDEYTCDVLS 215
           K +  ++S K N  +K+  CN+CH KGHI+ +C   K KQ   +     +    + DV  
Sbjct: 217 KNRGRSKSKKPN-SNKHKTCNYCHLKGHIKSECYKLKNKQSGDSKPRKGKEPMNSADVSY 275

Query: 216 VTNDSVN-----TKDRWISDFGCSQHISSNKKMFSLYTSVQG 326
           V  DS +     +K  WI D GCS H++  K MF+ Y    G
Sbjct: 276 VDFDSESGALDVSKSEWIMDSGCSFHVTPYKDMFTSYEEFNG 317


>gb|KMQ89046.1| integrase core domain protein [Lasius niger]
          Length = 589

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = +3

Query: 6   YDDSGQVLFTKEKSNNESSKCNLKHKNLMCNWCHKKGHIRVDC*THKKKQQDANVIELTE 185
           Y  S +      K +  S     K K   C++C K GH++ DC   K  Q+  N   +T 
Sbjct: 88  YSKSNKKTQGNHKKSTSSQADKQKFKGT-CHYCKKPGHMKRDCYKFKANQKGGNANSVTA 146

Query: 186 GDEYTCDVLSVTND--SVNTKDRWISDFGCSQHISSNKKMFSLYTSV 320
             + +  VL+VT++  ++N KD W++D G S H++S ++ F+   SV
Sbjct: 147 --DNSASVLTVTSEWPTINNKDVWLADSGASDHMTSREEWFTKLESV 191


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
 Frame = +3

Query: 75  KHKNLMCNWCHKKGHIRVDC*THKKKQQ-----DANVIELTEGDEYTCDVLSVTNDSVNT 239
           K K   C +C K+GH   DC   KKK+      DA V      D Y    L V ++S NT
Sbjct: 230 KKKKRKCFYCRKEGHYIRDCFEKKKKESQEKSGDAAVASDDGSDGYQSADLLVASNS-NT 288

Query: 240 KDRWISDFGCSQHISSNKKMFSLYTSVQG 326
           K +W+ D GCS H+   K +F  Y +V G
Sbjct: 289 KGQWVIDSGCSFHLCPEKTLFYKYEAVDG 317


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