BLASTX nr result
ID: Anemarrhena21_contig00044132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00044132
(203 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGF30292.1| RNA polymerase beta subunit, partial (chloroplast... 89 1e-15
ref|YP_009059511.1| RNA polymerase beta subunit [Iris gatesii] g... 88 2e-15
gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera] 88 2e-15
gb|AGW98452.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 88 2e-15
gb|AGW98197.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 88 2e-15
gb|AGW98112.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 88 2e-15
gb|AGW97603.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 88 2e-15
gb|AGW97518.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 88 2e-15
gb|AGW97263.1| RNA polymerase beta subunit (chloroplast) [Ipomoe... 88 2e-15
ref|YP_007475781.1| RNA polymerase beta subunit [Pseudophoenix v... 88 2e-15
gb|AFB18348.1| RNA polymerase beta subunit, partial [Phormium te... 88 2e-15
gb|AFB18345.1| RNA polymerase beta subunit, partial [Neoastelia ... 88 2e-15
gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventr... 88 2e-15
gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe ... 88 2e-15
gb|AFB18321.1| RNA polymerase beta subunit [Albuca kirkii] 88 2e-15
gb|AEX94371.1| RNA polymerase beta subunit (chloroplast) [Xerone... 88 2e-15
gb|AEX94370.1| RNA polymerase beta subunit (chloroplast) [Xantho... 88 2e-15
gb|AEX94354.1| RNA polymerase beta subunit (chloroplast) [Cordyl... 88 2e-15
gb|AEX94353.1| RNA polymerase beta subunit (chloroplast) [Iris t... 88 2e-15
gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornith... 88 2e-15
>gb|AGF30292.1| RNA polymerase beta subunit, partial (chloroplast) [Glechoma
hederacea]
Length = 422
Score = 89.0 bits (219), Expect = 1e-15
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRD+LVAA+HL
Sbjct: 227 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDILVAADHL 269
>ref|YP_009059511.1| RNA polymerase beta subunit [Iris gatesii]
gi|685161354|gb|AIN78998.1| RNA polymerase beta subunit
[Iris gatesii]
Length = 1070
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293
>gb|AAZ03996.1| RNA polymerase beta chain [Yucca schidigera]
Length = 1069
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293
>gb|AGW98452.1| RNA polymerase beta subunit (chloroplast) [Ipomoea minutiflora]
Length = 1062
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 243 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 285
>gb|AGW98197.1| RNA polymerase beta subunit (chloroplast) [Ipomoea tricolor]
Length = 1067
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 248 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 290
>gb|AGW98112.1| RNA polymerase beta subunit (chloroplast) [Ipomoea ternifolia]
Length = 1067
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 248 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 290
>gb|AGW97603.1| RNA polymerase beta subunit (chloroplast) [Ipomoea orizabensis]
Length = 1067
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 248 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 290
>gb|AGW97518.1| RNA polymerase beta subunit (chloroplast) [Ipomoea nil]
Length = 1062
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 243 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 285
>gb|AGW97263.1| RNA polymerase beta subunit (chloroplast) [Ipomoea hederifolia]
Length = 1062
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 243 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 285
>ref|YP_007475781.1| RNA polymerase beta subunit [Pseudophoenix vinifera]
gi|449326262|gb|AGE92846.1| RNA polymerase beta subunit
[Pseudophoenix vinifera]
Length = 1068
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 249 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 291
>gb|AFB18348.1| RNA polymerase beta subunit, partial [Phormium tenax]
Length = 1074
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 256 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 298
>gb|AFB18345.1| RNA polymerase beta subunit, partial [Neoastelia spectabilis]
Length = 1075
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 256 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 298
>gb|AFB18337.1| RNA polymerase beta subunit, partial [Hosta ventricosa]
Length = 1077
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 259 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 301
>gb|AFB18336.1| RNA polymerase beta subunit, partial [Hesperaloe parviflora]
Length = 1077
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 259 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 301
>gb|AFB18321.1| RNA polymerase beta subunit [Albuca kirkii]
Length = 1070
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293
>gb|AEX94371.1| RNA polymerase beta subunit (chloroplast) [Xeronema callistemon]
Length = 1070
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293
>gb|AEX94370.1| RNA polymerase beta subunit (chloroplast) [Xanthorrhoea preissii]
Length = 1070
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293
>gb|AEX94354.1| RNA polymerase beta subunit (chloroplast) [Cordyline australis]
Length = 1070
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293
>gb|AEX94353.1| RNA polymerase beta subunit (chloroplast) [Iris tenax]
Length = 1070
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293
>gb|AEX94351.1| RNA polymerase beta subunit (chloroplast) [Ornithogalum
tenuifolium]
Length = 1070
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 1 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLVAANHL 129
FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLL AA+HL
Sbjct: 251 FFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDLLAAADHL 293