BLASTX nr result

ID: Anemarrhena21_contig00041985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00041985
         (495 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012462875.1| PREDICTED: high mobility group B protein 10-...    40   5e-06
ref|XP_012462876.1| PREDICTED: high mobility group B protein 10-...    40   5e-06
gb|KHG28058.1| hypothetical protein F383_12220 [Gossypium arboreum]    40   5e-06

>ref|XP_012462875.1| PREDICTED: high mobility group B protein 10-like isoform X1
           [Gossypium raimondii] gi|763814653|gb|KJB81505.1|
           hypothetical protein B456_013G147900 [Gossypium
           raimondii]
          Length = 307

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 21/41 (51%), Positives = 24/41 (58%)
 Frame = -1

Query: 483 DNSNLKSNMGGYNFSSAEHYTILRPFCSGKEKVNIKNINSL 361
           D S  KSN  GYN   AEHY  L+P   G+EKV  K I +L
Sbjct: 229 DPSRPKSNRSGYNHFYAEHYAQLKPMYYGEEKVISKKIGNL 269



 Score = 36.2 bits (82), Expect(2) = 5e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = -2

Query: 365 LWNNLTESKKEVYQE-GDK-ERYKTGVSEYERS 273
           LW+NLTE++K+VYQE G K ERY T + EY  S
Sbjct: 269 LWSNLTEAEKQVYQEKGMKDERYGTEMLEYRSS 301


>ref|XP_012462876.1| PREDICTED: high mobility group B protein 10-like isoform X2
           [Gossypium raimondii] gi|763814654|gb|KJB81506.1|
           hypothetical protein B456_013G147900 [Gossypium
           raimondii]
          Length = 306

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 21/41 (51%), Positives = 24/41 (58%)
 Frame = -1

Query: 483 DNSNLKSNMGGYNFSSAEHYTILRPFCSGKEKVNIKNINSL 361
           D S  KSN  GYN   AEHY  L+P   G+EKV  K I +L
Sbjct: 228 DPSRPKSNRSGYNHFYAEHYAQLKPMYYGEEKVISKKIGNL 268



 Score = 36.2 bits (82), Expect(2) = 5e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = -2

Query: 365 LWNNLTESKKEVYQE-GDK-ERYKTGVSEYERS 273
           LW+NLTE++K+VYQE G K ERY T + EY  S
Sbjct: 268 LWSNLTEAEKQVYQEKGMKDERYGTEMLEYRSS 300


>gb|KHG28058.1| hypothetical protein F383_12220 [Gossypium arboreum]
          Length = 306

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 21/41 (51%), Positives = 24/41 (58%)
 Frame = -1

Query: 483 DNSNLKSNMGGYNFSSAEHYTILRPFCSGKEKVNIKNINSL 361
           D S  KSN  GYN   AEHY  L+P   G+EKV  K I +L
Sbjct: 228 DPSRPKSNRSGYNHFYAEHYAQLKPMYYGEEKVISKKIGNL 268



 Score = 36.2 bits (82), Expect(2) = 5e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = -2

Query: 365 LWNNLTESKKEVYQE-GDK-ERYKTGVSEYERS 273
           LW+NLTE++K+VYQE G K ERY T + EY  S
Sbjct: 268 LWSNLTEAEKQVYQEKGMKDERYGTEMLEYRSS 300


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