BLASTX nr result

ID: Anemarrhena21_contig00041876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00041876
         (250 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008801266.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    78   3e-12
ref|XP_010920280.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    76   1e-11
ref|XP_009400487.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    71   2e-10
ref|XP_010650181.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   1e-07
ref|XP_010650180.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   1e-07
ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   1e-07
gb|KDO38665.1| hypothetical protein CISIN_1g0123191mg, partial [...    58   3e-06
gb|KDO38664.1| hypothetical protein CISIN_1g0123191mg, partial [...    58   3e-06
ref|XP_006494000.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   3e-06
ref|XP_010103466.1| DEAD-box ATP-dependent RNA helicase 13 [Moru...    57   6e-06
ref|XP_011041475.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   6e-06
ref|XP_011041474.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   6e-06
gb|KDO38162.1| hypothetical protein CISIN_1g009003mg [Citrus sin...    56   8e-06
ref|XP_006420409.1| hypothetical protein CICLE_v10004340mg [Citr...    56   8e-06

>ref|XP_008801266.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           13 [Phoenix dactylifera]
          Length = 820

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 46/86 (53%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
 Frame = -3

Query: 230 DPTRLNSLSWNGSFAGDEDPFALLADGDEGGFLTLEEINEAEYGFTG----------TAK 81
           D  RL  L WN S   D DPF LLA G+EGGFL+LEEI+E+EYGF G            K
Sbjct: 32  DSHRLELLPWNESLPND-DPFFLLAGGNEGGFLSLEEIDESEYGFVGGVPDPVGGEKKPK 90

Query: 80  SKKRKRGTGDVDSNGAADDDSCLVEA 3
            KKRKRG+GD D     DD SC+V+A
Sbjct: 91  EKKRKRGSGDGD---WGDDGSCVVQA 113


>ref|XP_010920280.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Elaeis
           guineensis]
          Length = 814

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 44/86 (51%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
 Frame = -3

Query: 230 DPTRLNSLSWNGSFAGDEDPFALLADGDEGGFLTLEEINEAEYGFTG----------TAK 81
           D  RL+SL WN S   D DPF LLA  +EGGFL+LEEI+E+EYGF G            +
Sbjct: 31  DSRRLDSLRWNDSLPND-DPFFLLAGSNEGGFLSLEEIDESEYGFVGGVPEPLGVEKKPE 89

Query: 80  SKKRKRGTGDVDSNGAADDDSCLVEA 3
            KKRKRG+GD +S    D  SC+V+A
Sbjct: 90  GKKRKRGSGDGNS---GDGGSCIVQA 112


>ref|XP_009400487.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Musa acuminata
           subsp. malaccensis]
          Length = 820

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 18/95 (18%)
 Frame = -3

Query: 233 PDPTRLNSLSWNGSFAGDEDPFALLADGDEGGFLTLEEINEAEYGFTG------------ 90
           P+  +L+SL WNGS A D D F LL +  EGGFL+LEEI+E+EYGF G            
Sbjct: 32  PESDQLDSLPWNGSLAAD-DSFLLLGESSEGGFLSLEEIDESEYGFIGGIPDLEAGNKKK 90

Query: 89  ------TAKSKKRKRGTGDVDSNGAADDDSCLVEA 3
                   KSKKRKRG    + NG + D SC+V+A
Sbjct: 91  KKKLYSDLKSKKRKRG----EENGGS-DGSCVVDA 120


>ref|XP_010650181.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X3 [Vitis
           vinifera]
          Length = 727

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
 Frame = -3

Query: 233 PDPTRLNSLSWNGSFAGDEDPFALLADGD--EGGFLTLEEINEAEYGF------------ 96
           PD  RL SL WN S    +DPF+L    D  EGGFL+LEEI+E+EYG             
Sbjct: 17  PDLERLESLPWNPSLPDVDDPFSLFVGSDELEGGFLSLEEIDESEYGLEIHEPGPEDKKG 76

Query: 95  -TGTAKSKKRKRGTGDVDSNGAADDD 21
               +K  K+++ +GD DS+G   +D
Sbjct: 77  NPKQSKKSKKRKSSGDNDSSGGGVED 102


>ref|XP_010650180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X1 [Vitis
           vinifera]
          Length = 789

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
 Frame = -3

Query: 233 PDPTRLNSLSWNGSFAGDEDPFALLADGD--EGGFLTLEEINEAEYGF------------ 96
           PD  RL SL WN S    +DPF+L    D  EGGFL+LEEI+E+EYG             
Sbjct: 17  PDLERLESLPWNPSLPDVDDPFSLFVGSDELEGGFLSLEEIDESEYGLEIHEPGPEDKKG 76

Query: 95  -TGTAKSKKRKRGTGDVDSNGAADDD 21
               +K  K+++ +GD DS+G   +D
Sbjct: 77  NPKQSKKSKKRKSSGDNDSSGGGVED 102


>ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X2 [Vitis
           vinifera] gi|296083755|emb|CBI23744.3| unnamed protein
           product [Vitis vinifera]
          Length = 788

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
 Frame = -3

Query: 233 PDPTRLNSLSWNGSFAGDEDPFALLADGD--EGGFLTLEEINEAEYGF------------ 96
           PD  RL SL WN S    +DPF+L    D  EGGFL+LEEI+E+EYG             
Sbjct: 17  PDLERLESLPWNPSLPDVDDPFSLFVGSDELEGGFLSLEEIDESEYGLEIHEPGPEDKKG 76

Query: 95  -TGTAKSKKRKRGTGDVDSNGAADDD 21
               +K  K+++ +GD DS+G   +D
Sbjct: 77  NPKQSKKSKKRKSSGDNDSSGGGVED 102


>gb|KDO38665.1| hypothetical protein CISIN_1g0123191mg, partial [Citrus sinensis]
          Length = 278

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
 Frame = -3

Query: 221 RLNSLSWNGSF-AGDEDPFALLADGDE--GGFLTLEEINEAEYGFT----------GTAK 81
           +LNSL WN SF A D DPFA L   +E  GGFL+LEEI+EA Y                 
Sbjct: 32  KLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKTN 91

Query: 80  SKKRKRGTGDVDSNGAADDD 21
           +KKRKR + + +  G  D D
Sbjct: 92  TKKRKRSSANEEDPGDGDGD 111


>gb|KDO38664.1| hypothetical protein CISIN_1g0123191mg, partial [Citrus sinensis]
          Length = 277

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
 Frame = -3

Query: 221 RLNSLSWNGSF-AGDEDPFALLADGDE--GGFLTLEEINEAEYGFT----------GTAK 81
           +LNSL WN SF A D DPFA L   +E  GGFL+LEEI+EA Y                 
Sbjct: 32  KLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKTN 91

Query: 80  SKKRKRGTGDVDSNGAADDD 21
           +KKRKR + + +  G  D D
Sbjct: 92  TKKRKRSSANEEDPGDGDGD 111


>ref|XP_006494000.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like isoform X1
           [Citrus sinensis] gi|568882353|ref|XP_006494001.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like
           isoform X2 [Citrus sinensis]
          Length = 806

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
 Frame = -3

Query: 221 RLNSLSWNGSF-AGDEDPFALLADGDE--GGFLTLEEINEAEYGFT----------GTAK 81
           +LNSL WN SF A D DPFA L   +E  GGFL+LEEI+EA Y                 
Sbjct: 32  KLNSLKWNSSFSAADNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKTN 91

Query: 80  SKKRKRGTGDVDSNGAADDD 21
           +KKRKR + + +  G  D D
Sbjct: 92  TKKRKRSSANEEDPGDGDGD 111


>ref|XP_010103466.1| DEAD-box ATP-dependent RNA helicase 13 [Morus notabilis]
           gi|587907983|gb|EXB95959.1| DEAD-box ATP-dependent RNA
           helicase 13 [Morus notabilis]
          Length = 848

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 13/86 (15%)
 Frame = -3

Query: 221 RLNSLSWNGSFAGDEDPFALLADGDE--GGFLTLEEINEAEYGF--------TGTAKSKK 72
           RL+SL W+ S +GD DPF+ L   +E  GGFL+LEEI++AEY          TG  KSK 
Sbjct: 27  RLDSLPWSSSLSGD-DPFSFLVGSNELEGGFLSLEEIDQAEYDLEIPKPERETGKTKSKP 85

Query: 71  RKRGTGDVDSNG---AADDDSCLVEA 3
            K+     DS G    A+D+  L+E+
Sbjct: 86  TKQSEKQKDSGGDEVEAEDEMKLLES 111


>ref|XP_011041475.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X2
           [Populus euphratica]
          Length = 799

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 13/83 (15%)
 Frame = -3

Query: 233 PDPTRLNSLSWNGSFAGDEDPFALLADGDE--GGFLTLEEINEAEYGF-----------T 93
           P+  RL+SL WN S + D DPF+++A   E  GGFL+LEEI+E +YGF            
Sbjct: 30  PEIDRLDSLPWNSSISQD-DPFSVIAGSHELEGGFLSLEEIDEGDYGFEIPGLDKKVKKE 88

Query: 92  GTAKSKKRKRGTGDVDSNGAADD 24
              KSKK++    DVD++G  ++
Sbjct: 89  RKNKSKKQQDSDVDVDADGVEEE 111


>ref|XP_011041474.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 isoform X1
           [Populus euphratica]
          Length = 810

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 13/83 (15%)
 Frame = -3

Query: 233 PDPTRLNSLSWNGSFAGDEDPFALLADGDE--GGFLTLEEINEAEYGF-----------T 93
           P+  RL+SL WN S + D DPF+++A   E  GGFL+LEEI+E +YGF            
Sbjct: 30  PEIDRLDSLPWNSSISQD-DPFSVIAGSHELEGGFLSLEEIDEGDYGFEIPGLDKKVKKE 88

Query: 92  GTAKSKKRKRGTGDVDSNGAADD 24
              KSKK++    DVD++G  ++
Sbjct: 89  RKNKSKKQQDSDVDVDADGVEEE 111


>gb|KDO38162.1| hypothetical protein CISIN_1g009003mg [Citrus sinensis]
          Length = 547

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
 Frame = -3

Query: 221 RLNSLSWNGSF-AGDEDPFALLADGDE--GGFLTLEEINEAEYGFT----------GTAK 81
           +L+SL WN SF A D DPFA L   +E  GGFL+LEEI+EA Y                 
Sbjct: 32  KLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKLN 91

Query: 80  SKKRKRGTGDVDSNGAADDD 21
           SKKRKR + + + +G  D D
Sbjct: 92  SKKRKRSSANEEDSGDGDGD 111


>ref|XP_006420409.1| hypothetical protein CICLE_v10004340mg [Citrus clementina]
           gi|557522282|gb|ESR33649.1| hypothetical protein
           CICLE_v10004340mg [Citrus clementina]
          Length = 808

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
 Frame = -3

Query: 221 RLNSLSWNGSF-AGDEDPFALLADGDE--GGFLTLEEINEAEYGFT----------GTAK 81
           +L+SL WN SF A D DPFA L   +E  GGFL+LEEI+EA Y                 
Sbjct: 32  KLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKLN 91

Query: 80  SKKRKRGTGDVDSNGAADDD 21
           SKKRKR + + + +G  D D
Sbjct: 92  SKKRKRSSANEEDSGDGDGD 111


Top