BLASTX nr result

ID: Anemarrhena21_contig00041538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00041538
         (266 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008799071.1| PREDICTED: pentatricopeptide repeat-containi...    79   2e-12
ref|XP_009405907.1| PREDICTED: pentatricopeptide repeat-containi...    73   9e-11
ref|XP_010912586.1| PREDICTED: pentatricopeptide repeat-containi...    66   8e-09
ref|XP_008244565.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06

>ref|XP_008799071.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Phoenix dactylifera]
          Length = 711

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 42/83 (50%), Positives = 56/83 (67%)
 Frame = -2

Query: 259 SVLNRLIQTAARPKKPAKHPQIHQEISMLSALDNKNLPQSISILDSTTFSFSPSVYIRLL 80
           SVLNRLIQ AARP+KP K        S+L  LD+ +LP++I+ L ++   F  SVY RLL
Sbjct: 7   SVLNRLIQNAARPRKPFKPTNQSPTASILPHLDSGDLPRAIAALAASAVPFPASVYARLL 66

Query: 79  NLCFLKKNLVETRRVESHIVSTS 11
            LC  ++ LVE RR+ESH+V+ S
Sbjct: 67  QLCSSRRALVEARRIESHLVAFS 89


>ref|XP_009405907.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Musa acuminata subsp. malaccensis]
          Length = 715

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 39/81 (48%), Positives = 53/81 (65%)
 Frame = -2

Query: 259 SVLNRLIQTAARPKKPAKHPQIHQEISMLSALDNKNLPQSISILDSTTFSFSPSVYIRLL 80
           SVLNRLIQ AARPK+  K         +   LD+ +LP++I+ L S+   F  S+Y RLL
Sbjct: 7   SVLNRLIQRAARPKRSRKPSSSSSRTVIRRHLDSGDLPKTIAALSSSPAPFPTSLYARLL 66

Query: 79  NLCFLKKNLVETRRVESHIVS 17
            LC  K++LV+ RRVESH+V+
Sbjct: 67  RLCSSKRSLVDVRRVESHLVA 87


>ref|XP_010912586.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Elaeis guineensis]
          Length = 713

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = -2

Query: 259 SVLNRLIQTAARPKKPAKHPQIHQEISMLSALDNKNLPQSISILDSTTFS--FSPSVYIR 86
           SVLNRLIQ A RP+KP+K        S+L  LD+ +L ++++ + ++  +  F  SVY R
Sbjct: 7   SVLNRLIQNAIRPRKPSKPTNKSLTASILHHLDSGDLRRAVAAVAASASASPFPDSVYAR 66

Query: 85  LLNLCFLKKNLVETRRVESHIVSTS 11
           L  LC  ++ LVE RRVESH+++ S
Sbjct: 67  LFQLCSSRRALVEARRVESHLIAFS 91


>ref|XP_008244565.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Prunus mume]
          Length = 693

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -2

Query: 259 SVLNRLIQTAARPKKPAKHPQIHQEIS-MLSALDNKNLPQSISILDSTTFSFSPSVYIRL 83
           SVLNRL+       KP+    +    S +L+ LD+ +LP+++SIL ++ F F  S+Y RL
Sbjct: 7   SVLNRLLCDKGHLTKPSNPTTVKAITSTILTHLDSGHLPKAVSILSASPFPFQFSLYTRL 66

Query: 82  LNLCFLKKNLVETRRVESHIVSTSSL 5
             LC   + ++E R+VESH+V+ S +
Sbjct: 67  FQLCSSNRAILEVRKVESHLVTFSPI 92


>ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Fragaria vesca subsp. vesca]
           gi|764571378|ref|XP_011462664.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26540
           [Fragaria vesca subsp. vesca]
           gi|764571386|ref|XP_011462665.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g26540
           [Fragaria vesca subsp. vesca]
          Length = 693

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = -2

Query: 259 SVLNRLIQTAARPKKPAKHPQIHQEIS--MLSALDNKNLPQSISILDSTTFSFSPSVYIR 86
           SV+NRL+   A   KP+ HP   +  +  +LS L + +L +++S+L ST F F  S+Y  
Sbjct: 7   SVINRLLYDKAHLTKPS-HPSEAKAATAAILSHLSSGHLRKAVSLLFSTPFPFHFSLYSH 65

Query: 85  LLNLCFLKKNLVETRRVESHIVSTS 11
           L +LC   ++L+ETR++ESH+V+ S
Sbjct: 66  LFHLCSSSRSLLETRKLESHLVTFS 90


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