BLASTX nr result
ID: Anemarrhena21_contig00040787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00040787
(468 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 171 1e-40
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 169 9e-40
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 168 1e-39
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 167 2e-39
gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japo... 167 2e-39
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 167 2e-39
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 164 2e-38
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 164 2e-38
ref|XP_012067062.1| PREDICTED: DNA-directed RNA polymerase II su... 164 3e-38
gb|KDP42071.1| hypothetical protein JCGZ_01859 [Jatropha curcas] 164 3e-38
ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phas... 163 4e-38
ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 ... 163 4e-38
ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 ... 163 4e-38
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 163 4e-38
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S... 163 4e-38
gb|KHN35995.1| DNA-directed RNA polymerase II subunit RPB1 [Glyc... 162 6e-38
ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II su... 162 6e-38
ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II su... 162 6e-38
emb|CAA36733.1| DNA-directed RNA polymerase [Glycine max] 162 6e-38
ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II su... 162 8e-38
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 171 bits (434), Expect = 1e-40
Identities = 85/112 (75%), Positives = 90/112 (80%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ Y+EADHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1420 RCSFEETVDILLDAAVYSEADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQL 1479
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGLDF MTPS SPISGTPYHEG+MSPSYL SPN+RSSPIT AQFSPYV
Sbjct: 1480 PSYMEGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYV 1531
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 169 bits (427), Expect = 9e-40
Identities = 84/112 (75%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1420 RCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQL 1479
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGLDF MTPS SPISGTPYHEG+MSPSYL SPN+RSSPIT AQFSPYV
Sbjct: 1480 PSYMEGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYV 1531
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 168 bits (425), Expect = 1e-39
Identities = 83/112 (74%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ +AE DHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1420 RCSFEETVDILLDAAVFAETDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQL 1479
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGL+F MTPS SPISGTPYHEG+MSPSYL SPN+RSSPIT AQFSPYV
Sbjct: 1480 PSYMEGLEFGMTPSRSPISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYV 1531
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 167 bits (424), Expect = 2e-39
Identities = 84/112 (75%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVD LLDA+ +AE DHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1420 RCSFEETVDXLLDAAVFAETDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQL 1479
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGLDF MTPS SPISGTPYHEG+MSPSYL SPN+RSSPIT AQFSPYV
Sbjct: 1480 PSYMEGLDFGMTPSRSPISGTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYV 1531
>gb|EEE68068.1| hypothetical protein OsJ_26081 [Oryza sativa Japonica Group]
Length = 1526
Score = 167 bits (424), Expect = 2e-39
Identities = 83/112 (74%), Positives = 90/112 (80%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1090 RCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQL 1149
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGLDF MTP+ SPISGTPYHEG+MSPSYL SPNIR+SPIT AQFSPYV
Sbjct: 1150 PSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYV 1201
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 167 bits (424), Expect = 2e-39
Identities = 83/112 (74%), Positives = 90/112 (80%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1419 RCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQL 1478
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGLDF MTP+ SPISGTPYHEG+MSPSYL SPNIR+SPIT AQFSPYV
Sbjct: 1479 PSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYV 1530
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 164 bits (416), Expect = 2e-38
Identities = 81/112 (72%), Positives = 88/112 (78%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE DHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1419 RCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQL 1478
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTPS SPISGTPYHEG+MSP+YL SPN+R SPI+ AQFSPYV
Sbjct: 1479 PSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYV 1530
>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1837
Score = 164 bits (416), Expect = 2e-38
Identities = 81/112 (72%), Positives = 88/112 (78%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE DHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1419 RCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQL 1478
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTPS SPISGTPYHEG+MSP+YL SPN+R SPI+ AQFSPYV
Sbjct: 1479 PSYIDGLDFGMTPSRSPISGTPYHEGMMSPNYLLSPNLRLSPISDAQFSPYV 1530
>ref|XP_012067062.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Jatropha
curcas] gi|802563759|ref|XP_012067063.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1-like [Jatropha
curcas]
Length = 1843
Score = 164 bits (414), Expect = 3e-38
Identities = 80/112 (71%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+LKGVTENIMLGQLA IGTG C+LY
Sbjct: 1419 RCSFEETVDILLDAAVYAESDYLKGVTENIMLGQLAPIGTGGCSLYLNAEMLKNAIELQL 1478
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTP+ SP+SGTPYHEG+MSPSYL SPN+R SPIT AQFSPYV
Sbjct: 1479 PSYMDGLDFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPITDAQFSPYV 1530
>gb|KDP42071.1| hypothetical protein JCGZ_01859 [Jatropha curcas]
Length = 1378
Score = 164 bits (414), Expect = 3e-38
Identities = 80/112 (71%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+LKGVTENIMLGQLA IGTG C+LY
Sbjct: 954 RCSFEETVDILLDAAVYAESDYLKGVTENIMLGQLAPIGTGGCSLYLNAEMLKNAIELQL 1013
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTP+ SP+SGTPYHEG+MSPSYL SPN+R SPIT AQFSPYV
Sbjct: 1014 PSYMDGLDFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPITDAQFSPYV 1065
>ref|XP_007157862.1| hypothetical protein PHAVU_002G104500g [Phaseolus vulgaris]
gi|561031277|gb|ESW29856.1| hypothetical protein
PHAVU_002G104500g [Phaseolus vulgaris]
Length = 1834
Score = 163 bits (413), Expect = 4e-38
Identities = 80/112 (71%), Positives = 87/112 (77%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE DHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1419 RCSFEETVDILLDAAVYAETDHLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQL 1478
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTP+ SPISGTPYHEG+MSPSYL SPN+R SP + AQFSPYV
Sbjct: 1479 PSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTSDAQFSPYV 1530
>ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 isoform 5 [Theobroma
cacao] gi|508698849|gb|EOX90745.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 5 [Theobroma cacao]
Length = 1512
Score = 163 bits (413), Expect = 4e-38
Identities = 80/112 (71%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1070 RCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQL 1129
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGL+F MTP+ SP+SGTPYHEG+MSPSYL SPN+R SPIT AQFSPYV
Sbjct: 1130 PSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPITDAQFSPYV 1181
>ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 isoform 4 [Theobroma
cacao] gi|508698848|gb|EOX90744.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 4 [Theobroma cacao]
Length = 1511
Score = 163 bits (413), Expect = 4e-38
Identities = 80/112 (71%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1070 RCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQL 1129
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGL+F MTP+ SP+SGTPYHEG+MSPSYL SPN+R SPIT AQFSPYV
Sbjct: 1130 PSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPITDAQFSPYV 1181
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 163 bits (413), Expect = 4e-38
Identities = 80/112 (71%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1420 RCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQL 1479
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGL+F MTP+ SP+SGTPYHEG+MSPSYL SPN+R SPIT AQFSPYV
Sbjct: 1480 PSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPITDAQFSPYV 1531
>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
gi|241940227|gb|EES13372.1| hypothetical protein
SORBIDRAFT_07g003680 [Sorghum bicolor]
Length = 1857
Score = 163 bits (413), Expect = 4e-38
Identities = 83/113 (73%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+DHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1418 RCSFEETVDILLDAAVYAESDHLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQL 1477
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPI-TGAQFSPYV 336
PSY EGLDF MTP+ SPISGTPYHEG+MSPSYL SPNIR+SPI T A FSPYV
Sbjct: 1478 PSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYV 1530
>gb|KHN35995.1| DNA-directed RNA polymerase II subunit RPB1 [Glycine soja]
Length = 1824
Score = 162 bits (411), Expect = 6e-38
Identities = 80/112 (71%), Positives = 87/112 (77%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1409 RCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQL 1468
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTP+ SPISGTPYHEG+MSPSYL SPN+R SP T AQFSPYV
Sbjct: 1469 PSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTTDAQFSPYV 1520
>ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] gi|548833823|gb|ERM96260.1| hypothetical
protein AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 162 bits (411), Expect = 6e-38
Identities = 82/112 (73%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAEADHL+GVTENIMLGQLA IGTG CALY
Sbjct: 1422 RCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQL 1481
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EG+DF MTPS SP++GTPYHEG+MSP YL SPN+RSSPIT AQFSPYV
Sbjct: 1482 PSYMEGMDFGMTPSRSPMTGTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYV 1532
>ref|XP_003517152.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
[Glycine max] gi|571435633|ref|XP_006573537.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1-like isoform X2
[Glycine max]
Length = 1827
Score = 162 bits (411), Expect = 6e-38
Identities = 80/112 (71%), Positives = 87/112 (77%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1419 RCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQL 1478
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTP+ SPISGTPYHEG+MSPSYL SPN+R SP T AQFSPYV
Sbjct: 1479 PSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTTDAQFSPYV 1530
>emb|CAA36733.1| DNA-directed RNA polymerase [Glycine max]
Length = 625
Score = 162 bits (411), Expect = 6e-38
Identities = 80/112 (71%), Positives = 87/112 (77%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 246 RCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQL 305
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY +GLDF MTP+ SPISGTPYHEG+MSPSYL SPN+R SP T AQFSPYV
Sbjct: 306 PSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTTDAQFSPYV 357
>ref|XP_012469269.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Gossypium
raimondii] gi|763750176|gb|KJB17564.1| hypothetical
protein B456_003G005700 [Gossypium raimondii]
gi|763750177|gb|KJB17565.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750178|gb|KJB17566.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
gi|763750179|gb|KJB17567.1| hypothetical protein
B456_003G005700 [Gossypium raimondii]
Length = 1847
Score = 162 bits (410), Expect = 8e-38
Identities = 79/112 (70%), Positives = 89/112 (79%)
Frame = +1
Query: 1 RCSFEETVDILLDASAYAEADHLKGVTENIMLGQLAAIGTGVCALYXXXXXXXXXXXXXX 180
RCSFEETVDILLDA+ YAE+D+L+GVTENIMLGQLA IGTG CALY
Sbjct: 1420 RCSFEETVDILLDAAVYAESDYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQL 1479
Query: 181 PSYAEGLDFSMTPSCSPISGTPYHEGIMSPSYLSSPNIRSSPITGAQFSPYV 336
PSY EGL+F MTP+ SP+SGTPYHEG+MSPSYL SPN+R SPI+ AQFSPYV
Sbjct: 1480 PSYMEGLEFGMTPARSPVSGTPYHEGMMSPSYLLSPNLRLSPISDAQFSPYV 1531