BLASTX nr result
ID: Anemarrhena21_contig00040748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00040748
(544 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera] 45 5e-09
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 50 6e-09
gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis] 44 1e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 44 2e-08
emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera] 44 5e-07
ref|XP_006369212.1| hypothetical protein POPTR_0001s19040g, part... 46 5e-07
ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily prot... 42 2e-06
emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera] 43 2e-06
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera] 43 5e-06
ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobrom... 41 7e-06
>emb|CAN76612.1| hypothetical protein VITISV_040104 [Vitis vinifera]
Length = 127
Score = 44.7 bits (104), Expect(2) = 5e-09
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = -3
Query: 290 RVMATIILCLSDEVVYNVMNEETTAGLWCKLES 192
+V ATI LCL+D+V+Y+VM+EE+ +W KLES
Sbjct: 59 KVAATIRLCLADDVMYHVMDEESPTAIWLKLES 91
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLNTFN 85
YM+K L+NKL+LK++LY L M E + + QH+N FN
Sbjct: 93 YMSKLLTNKLYLKQKLYGLKMAEGSDLSQHINVFN 127
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease [Nicotiana tabacum]
gi|20045|emb|CAA32025.1| unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 49.7 bits (117), Expect(2) = 6e-09
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLNTFN 85
YM+K+L+NKL+LKKQLY L M E T L HLN FN
Sbjct: 92 YMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFN 126
Score = 37.0 bits (84), Expect(2) = 6e-09
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -3
Query: 290 RVMATIILCLSDEVVYNVMNEETTAGLWCKLES 192
R + I L LSD+VV N+++E+T G+W +LES
Sbjct: 58 RAASAIRLHLSDDVVNNIIDEDTARGIWTRLES 90
>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
Length = 289
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLNTFN 85
Y+ KSL+N+L LK++LY LWM E T I H+ FN
Sbjct: 85 YLMKSLTNRLLLKQRLYTLWMSEGTPIKSHIGEFN 119
Score = 41.2 bits (95), Expect(2) = 1e-08
Identities = 30/86 (34%), Positives = 43/86 (50%)
Frame = -3
Query: 452 TNKFEMKKFIENPIFLYERCG*QRCS*RKECTKPSRKGEEAHQDI***IE*H*FRVMATI 273
T K+ ++KF +N F G ++ K KP EE + R + TI
Sbjct: 5 TTKWNIEKFEDNISFSLWESGLKKALFGKS-KKPVTMTEEDWNQLE-------DRALTTI 56
Query: 272 ILCLSDEVVYNVMNEETTAGLWCKLE 195
LCL++EV+ V+ E+TTA LW KLE
Sbjct: 57 QLCLTNEVMQEVLTEKTTADLWSKLE 82
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 44.3 bits (103), Expect(2) = 2e-08
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -3
Query: 281 ATIILCLSDEVVYNVMNEETTAGLWCKLES 192
+TI+LCL+D+V+ V +EET AGLW KLES
Sbjct: 58 STIMLCLADDVITEVSDEETAAGLWLKLES 87
Score = 40.4 bits (93), Expect(2) = 2e-08
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLNTFN 85
YMTKSL+NKL LK++L+ L M E T + +HL N
Sbjct: 89 YMTKSLTNKLLLKQRLFGLRMAEGTQLREHLEQLN 123
>emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera]
Length = 734
Score = 43.5 bits (101), Expect(2) = 5e-07
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLI 109
YMTKSL+N+L+LKK+LY L MKEDT++
Sbjct: 46 YMTKSLTNRLYLKKRLYTLQMKEDTMM 72
Score = 36.6 bits (83), Expect(2) = 5e-07
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -3
Query: 281 ATIILCLSDEVVYNVMNEETTAGLWCKLES 192
+ I+LCL +EV+ V ++TTA LW KLES
Sbjct: 15 SVILLCLGNEVLCEVAKKDTTAKLWLKLES 44
>ref|XP_006369212.1| hypothetical protein POPTR_0001s19040g, partial [Populus
trichocarpa] gi|550347651|gb|ERP65781.1| hypothetical
protein POPTR_0001s19040g, partial [Populus trichocarpa]
Length = 190
Score = 46.2 bits (108), Expect(2) = 5e-07
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -3
Query: 290 RVMATIILCLSDEVVYNVMNEETTAGLWCKLES 192
R++ATI LCL D+V+Y+VMNEE+ +W KLES
Sbjct: 33 RIVATIRLCLYDDVMYHVMNEESPVTVWAKLES 65
Score = 33.9 bits (76), Expect(2) = 5e-07
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLN 94
Y++ SLSNKL+LK +L+ L M E T + +H N
Sbjct: 67 YISLSLSNKLYLKHKLFGLKMSEGTDLNRHFN 98
>ref|XP_007038204.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
gi|508775449|gb|EOY22705.1| Transducin/WD40 repeat-like
superfamily protein [Theobroma cacao]
Length = 1029
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLNTFN 85
YMTKSL+N+L++K++LY L M E T + H++ FN
Sbjct: 216 YMTKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFN 250
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -3
Query: 281 ATIILCLSDEVVYNVMNEETTAGLWCKLES 192
+ I+L LSDEV+ V +EE+ A +W KLES
Sbjct: 185 SVILLALSDEVLREVTDEESAAAVWFKLES 214
>emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera]
Length = 318
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTL 112
YMTKSL+N+L+LKK+LY L MKEDT+
Sbjct: 46 YMTKSLTNRLYLKKRLYTLQMKEDTI 71
Score = 34.7 bits (78), Expect(2) = 2e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 281 ATIILCLSDEVVYNVMNEETTAGLWCKLES 192
+ I+LCL +EV V ++TTA LW +LES
Sbjct: 15 SVILLCLGNEVFREVAKKDTTAKLWLRLES 44
>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
Length = 344
Score = 43.1 bits (100), Expect(2) = 5e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLNTFN 85
+MTKSL N+L+LKK+L+ L MKE I H N FN
Sbjct: 46 HMTKSLKNRLYLKKRLHTLQMKESMSIKDHFNEFN 80
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -3
Query: 275 IILCLSDEVVYNVMNEETTAGLWCKLES 192
I+LCL ++V+ + E+ TA LW KLES
Sbjct: 17 ILLCLGNKVLREIAEEDITAKLWLKLES 44
>ref|XP_007028624.1| Uncharacterized protein TCM_024518 [Theobroma cacao]
gi|508717229|gb|EOY09126.1| Uncharacterized protein
TCM_024518 [Theobroma cacao]
Length = 277
Score = 40.8 bits (94), Expect(2) = 7e-06
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = -2
Query: 189 YMTKSLSNKLFLKKQLYHLWMKEDTLILQHLNTFN 85
Y+TKSL+N+L++K++LY L M E T + H++ FN
Sbjct: 94 YITKSLTNRLYMKQRLYTLKMSEGTSVNTHIDEFN 128
Score = 35.4 bits (80), Expect(2) = 7e-06
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -3
Query: 281 ATIILCLSDEVVYNVMNEETTAGLWCKLES 192
+ I+L LSDEV+ V +EE+ A +W KLES
Sbjct: 63 SAILLTLSDEVLREVTDEESAAAMWFKLES 92