BLASTX nr result
ID: Anemarrhena21_contig00040638
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00040638
(606 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008803983.1| PREDICTED: pentatricopeptide repeat-containi... 185 1e-44
ref|XP_010269231.1| PREDICTED: pentatricopeptide repeat-containi... 185 2e-44
ref|XP_010935458.1| PREDICTED: pentatricopeptide repeat-containi... 179 7e-43
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi... 170 4e-40
ref|XP_009418657.1| PREDICTED: pentatricopeptide repeat-containi... 169 1e-39
gb|KDO68326.1| hypothetical protein CISIN_1g044873mg [Citrus sin... 169 1e-39
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi... 169 1e-39
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr... 169 1e-39
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar... 164 3e-38
ref|XP_010690228.1| PREDICTED: pentatricopeptide repeat-containi... 164 4e-38
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l... 162 1e-37
ref|XP_012067167.1| PREDICTED: pentatricopeptide repeat-containi... 162 2e-37
ref|XP_012458104.1| PREDICTED: pentatricopeptide repeat-containi... 160 3e-37
ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, part... 160 6e-37
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,... 158 2e-36
ref|XP_009121153.1| PREDICTED: pentatricopeptide repeat-containi... 157 3e-36
ref|XP_010489330.1| PREDICTED: pentatricopeptide repeat-containi... 157 4e-36
ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Popu... 156 6e-36
ref|XP_010467466.1| PREDICTED: pentatricopeptide repeat-containi... 156 8e-36
ref|XP_010028839.1| PREDICTED: pentatricopeptide repeat-containi... 155 1e-35
>ref|XP_008803983.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Phoenix dactylifera] gi|672112085|ref|XP_008803992.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Phoenix dactylifera]
Length = 881
Score = 185 bits (470), Expect = 1e-44
Identities = 91/171 (53%), Positives = 121/171 (70%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXLVRSCAASGLLDASLSFFQSLRSHLPTNPPSIKL 336
+L E+ LH+ + + + +G+LD +LS SLRSH P++PP I+L
Sbjct: 57 LLPELDHLHHLLLRLPPSAAPLCLAAISLASSTAGILDHALSQLHSLRSHFPSHPPPIRL 116
Query: 335 YNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEMP 156
YN+LL ++K NR DLVE YKDML+AGVSP YT NLLM +LCDS RLD+AR +F+ M
Sbjct: 117 YNSLLDSSLKANRPDLVETLYKDMLLAGVSPDAYTFNLLMCSLCDSGRLDEARLLFDRMT 176
Query: 155 KKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
KGC+PN+FSFGILI GYCK+G SL+ +EL++ ME GCSPN+VI+NTLI+
Sbjct: 177 VKGCQPNEFSFGILIRGYCKAGFSLRAVELLDVMERVGCSPNLVIYNTLIS 227
Score = 60.8 bits (146), Expect = 5e-07
Identities = 36/140 (25%), Positives = 64/140 (45%)
Frame = -2
Query: 425 CAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVS 246
C +L+A F L P+ +N +L D + M G
Sbjct: 265 CKTGKVLEAYRIFRDMQNDELGLPKPNQITFNIMLNGFCNGGMVDEARALVESMKENGFF 324
Query: 245 PRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLEL 66
++ N+ ++ L + RL +A+ + EM +KG +PN +S+ I+I G CK G+ +
Sbjct: 325 AQLENYNIWLSGLVKNGRLLEAQMLLEEMVRKGLKPNLYSYNIVINGLCKEGMFFGAESV 384
Query: 65 MECMESFGCSPNMVIFNTLI 6
+ M + G SP+ V ++TL+
Sbjct: 385 ISLMRNDGVSPDTVTYSTLL 404
>ref|XP_010269231.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Nelumbo nucifera] gi|720042423|ref|XP_010269232.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Nelumbo nucifera]
Length = 877
Score = 185 bits (469), Expect = 2e-44
Identities = 91/171 (53%), Positives = 120/171 (70%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXLVRSCAASGLLDASLSFFQSLRSHLPTNPPSIKL 336
ML E+ QLH L + A GLLD +LS FQSLRS PT PP ++L
Sbjct: 55 MLPEIDQLHQLLLLQPPETSRLSLTTLAQISAKLGLLDKALSQFQSLRSQFPTEPPPVRL 114
Query: 335 YNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEMP 156
YN LL+ +++ NR +LV YKDML+AGVSP YT N+L++ALCDS RL+DA+K+F++M
Sbjct: 115 YNVLLESSLRDNRLELVSELYKDMLIAGVSPETYTFNILISALCDSGRLEDAQKLFDKMH 174
Query: 155 KKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
+KGC+PN FSFGILI GYC++G+S +GLEL++ M GCS N VI+NTLI+
Sbjct: 175 EKGCKPNGFSFGILIHGYCRAGISSRGLELLDEMRRVGCSANTVIYNTLIS 225
Score = 63.2 bits (152), Expect = 1e-07
Identities = 32/113 (28%), Positives = 55/113 (48%)
Frame = -2
Query: 344 IKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFN 165
++ YN L + + + +M+ G++P +Y+ N+L+ LC S + DAR +
Sbjct: 324 LESYNIWLMGLVTNGKLLRARLVLTEMVDKGITPNIYSYNILIDGLCKSGMILDARMVLG 383
Query: 164 EMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLI 6
M G P+ ++ IL+ GYC G L +++ M GC PN N L+
Sbjct: 384 LMISNGISPDTVTYSILLHGYCSKGKVLDANKILHEMMRNGCYPNTFTCNILL 436
Score = 57.0 bits (136), Expect = 7e-06
Identities = 40/140 (28%), Positives = 66/140 (47%)
Frame = -2
Query: 425 CAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVS 246
C +L+AS F L P+ N +L+ + D ++ + M G
Sbjct: 263 CGLGKILEASKIFRDMQDDELGLPKPNHITCNIMLRGFFQGGMLDKADLLIESMNKDGFM 322
Query: 245 PRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLEL 66
++ + N+ + L + +L AR + EM KG PN +S+ ILI G CKSG+ L +
Sbjct: 323 -KLESYNIWLMGLVTNGKLLRARLVLTEMVDKGITPNIYSYNILIDGLCKSGMILDARMV 381
Query: 65 MECMESFGCSPNMVIFNTLI 6
+ M S G SP+ V ++ L+
Sbjct: 382 LGLMISNGISPDTVTYSILL 401
>ref|XP_010935458.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Elaeis guineensis] gi|743834166|ref|XP_010935459.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Elaeis guineensis]
Length = 881
Score = 179 bits (455), Expect = 7e-43
Identities = 90/171 (52%), Positives = 121/171 (70%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXLVRSCAASGLLDASLSFFQSLRSHLPTNPPSIKL 336
+L E+ LH+ L + + +G+LD +LS QSLRSH P++ P I+L
Sbjct: 57 LLPELDHLHHLLLNLPHSAAPHCLTALSLASSTAGILDRALSQLQSLRSHFPSHAPPIRL 116
Query: 335 YNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEMP 156
YN+LL ++K NR DLVE YKDML+AGVSP YT NLLM++LC+S RLD+AR +F+ M
Sbjct: 117 YNSLLGSSLKANRPDLVEALYKDMLLAGVSPDTYTFNLLMSSLCNSGRLDEARLLFDRMT 176
Query: 155 KKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
KGC+PN+FSFGILI GYCK+G SL+ +EL++ ME GC PN+VI+NTLI+
Sbjct: 177 LKGCQPNEFSFGILIRGYCKAGFSLRAVELLDGMERVGCLPNLVIYNTLIS 227
Score = 61.2 bits (147), Expect = 4e-07
Identities = 37/140 (26%), Positives = 64/140 (45%)
Frame = -2
Query: 425 CAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVS 246
C +L+A F L P+ +N +L D + M +G
Sbjct: 265 CKMGKVLEAYRIFRDMQDDELGLPRPNQITFNLILDGFCNGGMLDEARALVESMKESGFF 324
Query: 245 PRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLEL 66
R+ N+ ++ L + RL +AR + +M +KG PN +S+ I+I G CK G+ +
Sbjct: 325 ARLENYNIWLSGLVKNGRLLEARMLLEDMVRKGLGPNLYSYNIVIDGLCKEGMIFGAESV 384
Query: 65 MECMESFGCSPNMVIFNTLI 6
+ M + G SP+ V ++TL+
Sbjct: 385 ISLMRNNGISPDTVTYSTLL 404
Score = 58.9 bits (141), Expect = 2e-06
Identities = 34/136 (25%), Positives = 63/136 (46%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
G+LD + + +S++ ++ YN L +K R + +DM+ G+ P +Y
Sbjct: 306 GMLDEARALVESMKES--GFFARLENYNIWLSGLVKNGRLLEARMLLEDMVRKGLGPNLY 363
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+++ LC + A + + M G P+ ++ L+ GYC G + ++ M
Sbjct: 364 SYNIVIDGLCKEGMIFGAESVISLMRNNGISPDTVTYSTLLHGYCTKGKASGASRILHEM 423
Query: 53 ESFGCSPNMVIFNTLI 6
S GC PN N L+
Sbjct: 424 VSNGCFPNSFTCNILL 439
>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera] gi|731382609|ref|XP_010645876.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Vitis vinifera] gi|297744485|emb|CBI37747.3|
unnamed protein product [Vitis vinifera]
Length = 878
Score = 170 bits (431), Expect = 4e-40
Identities = 79/144 (54%), Positives = 109/144 (75%)
Frame = -2
Query: 434 VRSCAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVA 255
+R A SGL D + S FQS RS +P NPP + LYN +L+ ++++++ D YKDM+VA
Sbjct: 86 IRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKDMVVA 145
Query: 254 GVSPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQG 75
GVSP YT+NLL+ LCDS R +DAR++F++M KGCRPN+FSFGIL+ GYC++GLS++
Sbjct: 146 GVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRA 205
Query: 74 LELMECMESFGCSPNMVIFNTLIA 3
LEL++ M SFG PN VI+NTLI+
Sbjct: 206 LELLDGMGSFGVQPNKVIYNTLIS 229
Score = 65.1 bits (157), Expect = 3e-08
Identities = 35/136 (25%), Positives = 68/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
G+L+ + + +S++ + N ++ YN L ++ + ++ K+M+ G+ P +Y
Sbjct: 309 GMLEEAKTLVESMKRN--GNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIY 366
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N +M LC + + DAR + M G P+ ++ L+ G C +G L+ ++ M
Sbjct: 367 SFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEM 426
Query: 53 ESFGCSPNMVIFNTLI 6
GCSPN N L+
Sbjct: 427 MRRGCSPNTYTCNILL 442
Score = 60.1 bits (144), Expect = 8e-07
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = -2
Query: 425 CAASGLLDASLSFFQ-SLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGV 249
C+A +L+AS F + L P+I +N +L+ K+ + + + M G
Sbjct: 267 CSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGN 326
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
+ + N+ + L + +L +A+ EM KG PN +SF ++ G CK+GL
Sbjct: 327 LMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARM 386
Query: 68 LMECMESFGCSPNMVIFNTLI 6
+M M S G P+ V ++TL+
Sbjct: 387 IMGLMISSGIGPDTVTYSTLL 407
Score = 57.4 bits (137), Expect = 5e-06
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = -2
Query: 347 SIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMF 168
S++ YN+L+ +N+ + DM G++P + T N +++ LC+ R+ DA +
Sbjct: 597 SLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLL 656
Query: 167 NEMPKKGCRPNQFSFGILICGYCKS 93
+EM +KG PN SF +LI +CK+
Sbjct: 657 DEMLQKGISPNISSFRLLIKAFCKA 681
>ref|XP_009418657.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Musa acuminata subsp. malaccensis]
Length = 883
Score = 169 bits (428), Expect = 1e-39
Identities = 78/140 (55%), Positives = 111/140 (79%)
Frame = -2
Query: 422 AASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSP 243
A++GLLD +L+ F+SLRS P++PPS +LYN LL +++ +R DLVEV Y+DML+AGV P
Sbjct: 87 ASAGLLDDALAHFRSLRSQFPSHPPSTRLYNCLLNCSLRAHRADLVEVLYRDMLLAGVPP 146
Query: 242 RVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELM 63
YT N+L+ +LCDS R+++AR +F+ MP K C+P++FSFG LIC YCK+GLS + +EL+
Sbjct: 147 ETYTFNILIFSLCDSDRIEEARLLFDNMPLKNCQPDEFSFGFLICRYCKAGLSHRAVELL 206
Query: 62 ECMESFGCSPNMVIFNTLIA 3
+ ME G SPN+VI+NTLI+
Sbjct: 207 DEMERLGRSPNIVIYNTLIS 226
Score = 61.2 bits (147), Expect = 4e-07
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = -2
Query: 350 PSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKM 171
P+I +YN L+ K+ E + M G+ P V T N ++ALC + ++ +A ++
Sbjct: 216 PNIVIYNTLISSFCKEGSIGEAEKLVERMRKDGIFPNVVTFNSRISALCKAGKVLEAYQI 275
Query: 170 FNEMPKKGC----RPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFN 15
F +M + RPNQ +F +++ G+CK G+ + L+E M+ G ++ +N
Sbjct: 276 FRDMQEDNVLGLPRPNQITFNLMLDGFCKGGMLEEARALVELMKVGGSLTSLQSYN 331
Score = 59.7 bits (143), Expect = 1e-06
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = -2
Query: 425 CAASGLLDASLSFFQSLRSHLPTNP-PSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGV 249
C A +L+A F ++ P P+ +N +L K + + M V G
Sbjct: 264 CKAGKVLEAYQIFRDMQEDNVLGLPRPNQITFNLMLDGFCKGGMLEEARALVELMKVGGS 323
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
+ + N+ ++ L RL +A+++ +M ++G PN +S+ ILI G CK G+
Sbjct: 324 LTSLQSYNIWLSGLVKCGRLLEAQQLLEQMVQQGIEPNSYSYNILIDGLCKEGMIYSARS 383
Query: 68 LMECMESFGCSPNMVIFNTLI 6
+M M++ G SP+ V +++L+
Sbjct: 384 VMNLMKNNGTSPDPVTYSSLL 404
>gb|KDO68326.1| hypothetical protein CISIN_1g044873mg [Citrus sinensis]
Length = 874
Score = 169 bits (427), Expect = 1e-39
Identities = 86/172 (50%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXL-VRSCAASGLLDASLSFFQSLRSHLPTNPPSIK 339
ML E+H LH+ V+ A SGLLD + S F+S+R H +PP I
Sbjct: 58 MLEEIHTLHSLLLSLKPRGNSHSSLTSLVKILAKSGLLDEAFSQFKSIRVHFHGDPPCIY 117
Query: 338 LYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEM 159
LYN L + +++ D + YKDM+VA VSP YT NLL+ ALCDS RL+DARK+F++M
Sbjct: 118 LYNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKLFDKM 177
Query: 158 PKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
KGCRPN+FSF IL+ GYC++GL+ +GLELME M S G SPN V++NTLI+
Sbjct: 178 SDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLIS 229
Score = 63.2 bits (152), Expect = 1e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Frame = -2
Query: 347 SIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMF 168
+++ YN L ++ + + ++M+ GV P +++ N+L+ LC + L DAR +
Sbjct: 329 NLESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVM 388
Query: 167 NEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLI 6
+ M +G P+ ++ L+ GYC +G + ++ M GCSP + N L+
Sbjct: 389 DLMVDRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILL 442
Score = 61.2 bits (147), Expect = 4e-07
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = -2
Query: 245 PRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLEL 66
P + T + +++ALC + +LD+A+K F EM K RP+ F + I YCK G +
Sbjct: 511 PDLITYSTVISALCKAGKLDEAKKKFTEMMGKNVRPDSFVYDNFIHSYCKEGKLSSAFRV 570
Query: 65 MECMESFGCSPNMVIFNTLI 6
++ ME GCS + +N+LI
Sbjct: 571 LKDMEKNGCSKTLQTYNSLI 590
Score = 57.4 bits (137), Expect = 5e-06
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = -2
Query: 425 CAASGLLDASLSFFQ-SLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGV 249
C +L+AS F L L P+I YN +L+ K+ + + + G
Sbjct: 267 CRTGKILEASRIFRDMQLDEDLGLPRPNIITYNLMLEGFCKEGMLEEAKTLVDAVTKNGG 326
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
S + + N+ + L + +L +A+ + EM +KG P+ S+ ILI G CK+ +
Sbjct: 327 SLNLESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARM 386
Query: 68 LMECMESFGCSPNMVIFNTLI 6
+M+ M G SP+ + ++TL+
Sbjct: 387 VMDLMVDRGISPDTITYSTLL 407
>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
gi|568866524|ref|XP_006486605.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17140-like [Citrus sinensis]
Length = 889
Score = 169 bits (427), Expect = 1e-39
Identities = 86/172 (50%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXL-VRSCAASGLLDASLSFFQSLRSHLPTNPPSIK 339
ML E+H LH+ V+ A SGLLD + S F+S+R H +PP I
Sbjct: 58 MLEEIHTLHSLLLSLKPRGNSHSSLTSLVKILAKSGLLDEAFSQFKSIRVHFHGDPPCIY 117
Query: 338 LYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEM 159
LYN L + +++ D + YKDM+VA VSP YT NLL+ ALCDS RL+DARK+F++M
Sbjct: 118 LYNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKLFDKM 177
Query: 158 PKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
KGCRPN+FSF IL+ GYC++GL+ +GLELME M S G SPN V++NTLI+
Sbjct: 178 SDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLIS 229
Score = 63.2 bits (152), Expect = 1e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Frame = -2
Query: 347 SIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMF 168
+++ YN L ++ + + ++M+ GV P +++ N+L+ LC + L DAR +
Sbjct: 329 NLESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVM 388
Query: 167 NEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLI 6
+ M +G P+ ++ L+ GYC +G + ++ M GCSP + N L+
Sbjct: 389 DLMVDRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILL 442
Score = 61.2 bits (147), Expect = 4e-07
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = -2
Query: 245 PRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLEL 66
P + T + +++ALC + +LD+A+K F EM K RP+ F + I YCK G +
Sbjct: 526 PDLITYSTVISALCKAGKLDEAKKKFTEMMGKNVRPDSFVYDNFIHSYCKEGKLSSAFRV 585
Query: 65 MECMESFGCSPNMVIFNTLI 6
++ ME GCS + +N+LI
Sbjct: 586 LKDMEKNGCSKTLQTYNSLI 605
Score = 57.4 bits (137), Expect = 5e-06
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = -2
Query: 425 CAASGLLDASLSFFQ-SLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGV 249
C +L+AS F L L P+I YN +L+ K+ + + + G
Sbjct: 267 CRTGKILEASRIFRDMQLDEDLGLPRPNIITYNLMLEGFCKEGMLEEAKTLVDAVTKNGG 326
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
S + + N+ + L + +L +A+ + EM +KG P+ S+ ILI G CK+ +
Sbjct: 327 SLNLESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARM 386
Query: 68 LMECMESFGCSPNMVIFNTLI 6
+M+ M G SP+ + ++TL+
Sbjct: 387 VMDLMVDRGISPDTITYSTLL 407
>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
gi|557524367|gb|ESR35673.1| hypothetical protein
CICLE_v10027787mg [Citrus clementina]
Length = 889
Score = 169 bits (427), Expect = 1e-39
Identities = 86/172 (50%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXL-VRSCAASGLLDASLSFFQSLRSHLPTNPPSIK 339
ML E+H LH+ V+ A SGLLD + S F+S+R H +PP I
Sbjct: 58 MLEEIHTLHSLLLSLKPRGNSHSSLTSLVKILAKSGLLDEAFSQFKSIRVHFHGDPPCIY 117
Query: 338 LYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEM 159
LYN L + +++ D + YKDM+VA VSP YT NLL+ ALCDS RL+DARK+F++M
Sbjct: 118 LYNVLFECCVRKQHMDYLMWLYKDMVVAKVSPETYTFNLLIRALCDSGRLEDARKLFDKM 177
Query: 158 PKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
KGCRPN+FSF IL+ GYC++GL+ +GLELME M S G SPN V++NTLI+
Sbjct: 178 SDKGCRPNEFSFAILVRGYCRAGLADEGLELMELMRSLGFSPNRVVYNTLIS 229
Score = 63.2 bits (152), Expect = 1e-07
Identities = 30/114 (26%), Positives = 59/114 (51%)
Frame = -2
Query: 347 SIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMF 168
+++ YN L ++ + + ++M+ GV P +++ N+L+ LC + L DAR +
Sbjct: 329 NLESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARMVM 388
Query: 167 NEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLI 6
+ M +G P+ ++ L+ GYC +G + ++ M GCSP + N L+
Sbjct: 389 DLMVDRGISPDTITYSTLLHGYCSNGKVFEANNVLYEMIRNGCSPTIFTCNILL 442
Score = 61.2 bits (147), Expect = 4e-07
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = -2
Query: 245 PRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLEL 66
P + T + +++ALC + +LD+A+K F EM K RP+ F + I YCK G +
Sbjct: 526 PDLITYSTVISALCKAGKLDEAKKKFTEMMGKNVRPDSFVYDNFIHSYCKEGKLSSAFRV 585
Query: 65 MECMESFGCSPNMVIFNTLI 6
++ ME GCS + +N+LI
Sbjct: 586 LKDMEKNGCSKTLQTYNSLI 605
Score = 57.4 bits (137), Expect = 5e-06
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Frame = -2
Query: 425 CAASGLLDASLSFFQ-SLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGV 249
C +L+AS F L L P+I YN +L+ K+ + + + G
Sbjct: 267 CRTGKILEASRIFRDMQLDEDLGLPRPNIITYNLMLEGFCKEGMLEEAKTLVDAVTKNGG 326
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
S + + N+ + L + +L +A+ + EM +KG P+ S+ ILI G CK+ +
Sbjct: 327 SLNLESYNIWLMGLVRNGKLVEAQAVLQEMVEKGVEPSIHSYNILIDGLCKNRMLSDARM 386
Query: 68 LMECMESFGCSPNMVIFNTLI 6
+M+ M G SP+ + ++TL+
Sbjct: 387 VMDLMVDRGISPDTITYSTLL 407
>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 164 bits (415), Expect = 3e-38
Identities = 81/172 (47%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXLVRSC-AASGLLDASLSFFQSLRSHLPTNPPSIK 339
M E+ +LHN V S A S +D + FQ +RS P N PS+
Sbjct: 54 MHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVY 113
Query: 338 LYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEM 159
LYN LL+ IK+ R + V YKDM++ G++P+ YT NLL+ ALCDS +D AR++F+EM
Sbjct: 114 LYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 158 PKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
P+KGC+PN+F+FGIL+ GYCK+GL+ +GLEL+ MESFG PN VI+NT+++
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Score = 74.3 bits (181), Expect = 4e-11
Identities = 42/136 (30%), Positives = 68/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
GLL+ + + F+S+R + + S++ YN LQ ++ +F E K M G+ P +Y
Sbjct: 305 GLLEDAKTLFESIREN--DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+LM LC L DA+ + M + G P+ ++G L+ GYC G L++ M
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 53 ESFGCSPNMVIFNTLI 6
C PN N L+
Sbjct: 423 MRNNCLPNAYTCNILL 438
>ref|XP_010690228.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Beta vulgaris subsp. vulgaris]
gi|731357474|ref|XP_010690229.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g17140
[Beta vulgaris subsp. vulgaris]
gi|870848969|gb|KMT01232.1| hypothetical protein
BVRB_9g212500 [Beta vulgaris subsp. vulgaris]
Length = 873
Score = 164 bits (414), Expect = 4e-38
Identities = 78/171 (45%), Positives = 111/171 (64%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXLVRSCAASGLLDASLSFFQSLRSHLPTNPPSIKL 336
M ++ LHN LVR A L+D ++ FQS R P NPP I +
Sbjct: 58 MYPQLDNLHNQLLLLHKKSATTPLFSLVRILAKYDLIDMAILHFQSTRKQFPQNPPPIYI 117
Query: 335 YNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEMP 156
YN LL+ +++QN+ DLV + YKDM +GVSP +YT NLL+ LCDS L+DARK+ ++MP
Sbjct: 118 YNVLLESSVRQNKLDLVPLLYKDMFFSGVSPEIYTFNLLIRGLCDSGHLEDARKVLDKMP 177
Query: 155 KKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
++GC+PN+FSFGILI GYC++G + +GL +++ M G PN V++NTLI+
Sbjct: 178 ERGCKPNEFSFGILIRGYCRTGFATEGLVILDEMRQTGLVPNKVVYNTLIS 228
>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 874
Score = 162 bits (410), Expect = 1e-37
Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 1/172 (0%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXLVRSC-AASGLLDASLSFFQSLRSHLPTNPPSIK 339
M E+ +LHN V S A S +D + FQ +RS P N P I
Sbjct: 54 MHEEIEELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIY 113
Query: 338 LYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEM 159
LYN LL+ I++ R + V YKDM++ G+SP YT NLL+ ALCDS +D AR++F+EM
Sbjct: 114 LYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEM 173
Query: 158 PKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
P+KGC+PN+F+FGIL+ GYCK+GL+ +GLEL+ MESFG PN V++NT+++
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVS 225
Score = 75.9 bits (185), Expect = 1e-11
Identities = 42/136 (30%), Positives = 69/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
GLL+ + + F+S+R + + S++ YN LQ ++ +F E K M+ G+ P +Y
Sbjct: 305 GLLEDAKTLFESIREN--DDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIY 362
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+LM LC L DA+ + M + G P+ ++G L+ GYC G L++ M
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Query: 53 ESFGCSPNMVIFNTLI 6
C PN N L+
Sbjct: 423 MRNNCLPNAYTCNILL 438
>ref|XP_012067167.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Jatropha curcas]
Length = 873
Score = 162 bits (409), Expect = 2e-37
Identities = 76/144 (52%), Positives = 107/144 (74%)
Frame = -2
Query: 434 VRSCAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVA 255
V + A S L D ++S+F+SLR P PPS+ LYN LL+ I+Q+R D V +DM++A
Sbjct: 82 VTTLAKSDLSDKAISYFKSLRFRFPEKPPSVYLYNILLKSCIRQSRVDSVSWLLEDMVIA 141
Query: 254 GVSPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQG 75
GVSP YT NLL+ LCDS L+DA+++F++MP+KGC+PN+FSFGIL+ GYC++G + +G
Sbjct: 142 GVSPETYTFNLLIGLLCDSGCLEDAQELFDKMPEKGCKPNEFSFGILVRGYCRAGFASKG 201
Query: 74 LELMECMESFGCSPNMVIFNTLIA 3
LEL+ M S G SPN V++NTLI+
Sbjct: 202 LELLREMRSLGFSPNRVVYNTLIS 225
Score = 65.5 bits (158), Expect = 2e-08
Identities = 34/136 (25%), Positives = 68/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
G+L+ + + ++++ + N + YN L +++ ++ +K+ML G+ P +Y
Sbjct: 305 GMLEEARTLVETMKRN--GNMMNSGSYNIWLLGLVRKGMLLEAQLVFKEMLGIGIEPNIY 362
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+++ LC + L DAR + M + G P+ ++ L+ GYC G + L+ M
Sbjct: 363 SYNIVIDGLCKNGMLSDARMLMGLMIQSGISPDTITYSTLLHGYCNKGKIFEANNLLHDM 422
Query: 53 ESFGCSPNMVIFNTLI 6
C PN+ N L+
Sbjct: 423 MRNNCFPNIYTCNILL 438
Score = 60.1 bits (144), Expect = 8e-07
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Frame = -2
Query: 434 VRSCAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVA 255
VR +G L + +RS L +P + +YN L+ ++ + + E M+
Sbjct: 189 VRGYCRAGFASKGLELLREMRS-LGFSPNRV-VYNTLISSFCREGKINDAEELVDRMIEE 246
Query: 254 GVSPRVYTINLLMTALCDSCRLDDARKMFNEMPKKG----CRPNQFSFGILICGYCKSGL 87
G+SP V T N ++ALC S ++ +A ++F +M RPN ++ +++ G+CK G+
Sbjct: 247 GLSPDVVTFNSRISALCSSGKILEASRIFRDMQIDEDLGLPRPNVITYNLMLMGFCKEGM 306
Query: 86 SLQGLELMECMESFGCSPNMVIFN 15
+ L+E M+ G N +N
Sbjct: 307 LEEARTLVETMKRNGNMMNSGSYN 330
Score = 58.2 bits (139), Expect = 3e-06
Identities = 30/85 (35%), Positives = 49/85 (57%)
Frame = -2
Query: 347 SIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMF 168
+++ YN+L+Q +N+ V +M GVSP V T N+++ LC+ R+ DA +
Sbjct: 593 TLQTYNSLIQGLGSKNQIFEVYGMIDEMKEKGVSPNVSTYNMVLNCLCEGGRIKDAPSVL 652
Query: 167 NEMPKKGCRPNQFSFGILICGYCKS 93
+EM + G PN SF +LI +CK+
Sbjct: 653 DEMLQNGISPNISSFRMLIKAFCKA 677
>ref|XP_012458104.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Gossypium raimondii] gi|823251032|ref|XP_012458105.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Gossypium raimondii]
gi|763810919|gb|KJB77821.1| hypothetical protein
B456_012G159300 [Gossypium raimondii]
gi|763810920|gb|KJB77822.1| hypothetical protein
B456_012G159300 [Gossypium raimondii]
gi|763810921|gb|KJB77823.1| hypothetical protein
B456_012G159300 [Gossypium raimondii]
Length = 868
Score = 160 bits (406), Expect = 3e-37
Identities = 79/144 (54%), Positives = 101/144 (70%)
Frame = -2
Query: 434 VRSCAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVA 255
V A SG D + S FQS+R P NPPSI LYN L IK+ R D V YKDM++A
Sbjct: 80 VNLLAKSGFFDKAFSQFQSIRKMFPQNPPSICLYNVLFGCCIKERRSDCVLWLYKDMVLA 139
Query: 254 GVSPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQG 75
GVSP YT NLL+ LCD L+DAR++F++MP+KGC PN+FSFGIL+ GYC+ GL+ +G
Sbjct: 140 GVSPETYTFNLLICGLCDLGHLEDARELFDKMPEKGCLPNEFSFGILVRGYCRFGLANKG 199
Query: 74 LELMECMESFGCSPNMVIFNTLIA 3
LEL++ M S G PN V++NTLI+
Sbjct: 200 LELLDEMRSSGILPNRVVYNTLIS 223
Score = 58.9 bits (141), Expect = 2e-06
Identities = 30/110 (27%), Positives = 54/110 (49%)
Frame = -2
Query: 335 YNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEMP 156
YN L ++ + ++ +DM+ GV P +Y+ N++M LC + L DAR + +
Sbjct: 327 YNIWLLGLLRNAKLVEAQLVLEDMVDKGVEPNIYSYNIVMDGLCKNGMLSDARMVMGFIV 386
Query: 155 KKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLI 6
+ G P+ ++ L+ GYC+ G + ++ M G PN N L+
Sbjct: 387 RSGLSPDTVTYSTLLHGYCRKGKLSEANAILNEMMRSGYVPNTYTCNILL 436
Score = 57.0 bits (136), Expect = 7e-06
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = -2
Query: 425 CAASGLLDASLSFFQ-SLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGV 249
C+A +L+AS F + L P++ YN +L+ KQ + + M G
Sbjct: 261 CSAGKVLEASRIFRDMQIDEALGLPRPNVITYNLMLEGFCKQGMLVEAKALVESMEKNGD 320
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
+ + N+ + L + +L +A+ + +M KG PN +S+ I++ G CK+G+
Sbjct: 321 LMNLDSYNIWLLGLLRNAKLVEAQLVLEDMVDKGVEPNIYSYNIVMDGLCKNGMLSDARM 380
Query: 68 LMECMESFGCSPNMVIFNTLI 6
+M + G SP+ V ++TL+
Sbjct: 381 VMGFIVRSGLSPDTVTYSTLL 401
>ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, partial [Capsella rubella]
gi|482565669|gb|EOA29858.1| hypothetical protein
CARUB_v10012952mg, partial [Capsella rubella]
Length = 881
Score = 160 bits (404), Expect = 6e-37
Identities = 78/172 (45%), Positives = 111/172 (64%), Gaps = 1/172 (0%)
Frame = -2
Query: 515 MLTEVHQLHNFXXXXXXXXXXXXXXXLVRSC-AASGLLDASLSFFQSLRSHLPTNPPSIK 339
M E+ ++HN V S A S +D + FQ +RS P P I
Sbjct: 61 MHDEIEEIHNLILSSSIEKTRLSSLLSVVSIFAKSNYIDKAFPQFQFVRSRFPEKKPGIY 120
Query: 338 LYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFNEM 159
LYN LL+ I++ R + V YKDM++ G++P+ YT NLL+ ALCDS +D AR++F+EM
Sbjct: 121 LYNVLLESCIRERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEM 180
Query: 158 PKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLIA 3
P+KGC+PN+F+FGILI GYCK+G+S +GLEL+ MESFG PN V++NT+++
Sbjct: 181 PEKGCKPNEFTFGILIRGYCKAGMSDKGLELLNSMESFGILPNKVVYNTIVS 232
Score = 74.3 bits (181), Expect = 4e-11
Identities = 41/136 (30%), Positives = 67/136 (49%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
G L+ + + F S+R + S++ YN LQ ++ +F E K M+ G+ P ++
Sbjct: 312 GFLEDAKTLFDSIREN--DELASLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIF 369
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+LM LC L DA+ +F M + G P+ ++G L+ GYC G L++ M
Sbjct: 370 SYNILMDGLCKLGMLSDAKTIFGLMKQNGVSPDAVTYGCLLHGYCSVGKVDAAKRLLQEM 429
Query: 53 ESFGCSPNMVIFNTLI 6
C PN N L+
Sbjct: 430 MRNNCLPNAYTCNILL 445
>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 874
Score = 158 bits (399), Expect = 2e-36
Identities = 74/140 (52%), Positives = 104/140 (74%)
Frame = -2
Query: 422 AASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSP 243
A SG + ++S F+SLRS+ P PSI LYN LL+ I++NR +LV YKDM++A VSP
Sbjct: 86 AKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSP 145
Query: 242 RVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELM 63
YT NLL+ LCDS L+DAR++F++MP +GC PN+F+FGIL+ GYC++GL+ +GLEL+
Sbjct: 146 EAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELL 205
Query: 62 ECMESFGCSPNMVIFNTLIA 3
M + G PN V++NTLI+
Sbjct: 206 GQMRTMGILPNNVLYNTLIS 225
Score = 68.9 bits (167), Expect = 2e-09
Identities = 38/136 (27%), Positives = 68/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
G+L+ + + +++ + N +++ YN L I+ + + K+ML G+ P +Y
Sbjct: 305 GMLEEAKTLVDTMKRN--ANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIY 362
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N++M LC + L DAR + M + G P+ ++ L+ GYC G + L+ M
Sbjct: 363 SYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEM 422
Query: 53 ESFGCSPNMVIFNTLI 6
S CSPN N L+
Sbjct: 423 ISNNCSPNTYTCNVLL 438
Score = 58.2 bits (139), Expect = 3e-06
Identities = 26/81 (32%), Positives = 47/81 (58%)
Frame = -2
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
+P + T + +++ LC + RLDDA+K F EM KG +P+ + I +C+ G +
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQ 580
Query: 68 LMECMESFGCSPNMVIFNTLI 6
+++ ME GC+ + +N+LI
Sbjct: 581 VLKDMEKRGCNKTLQTYNSLI 601
>ref|XP_009121153.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Brassica rapa]
Length = 894
Score = 157 bits (398), Expect = 3e-36
Identities = 73/140 (52%), Positives = 101/140 (72%)
Frame = -2
Query: 422 AASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSP 243
A S +D + S FQ +RSH P P I LYN LL+ IK+ R D V YKDM+++ ++P
Sbjct: 106 AKSNHIDKAFSQFQFVRSHFPEKGPGIYLYNVLLEGCIKERRVDFVSWLYKDMVISRIAP 165
Query: 242 RVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELM 63
+ YT NLL+ ALCDS +D AR++F+EMP+KGC PN+F+FGIL+ GYC+ GL +GLEL+
Sbjct: 166 QSYTFNLLIRALCDSSCVDAARELFDEMPEKGCNPNEFTFGILVRGYCRVGLPDKGLELL 225
Query: 62 ECMESFGCSPNMVIFNTLIA 3
MESFG PN V++NT+++
Sbjct: 226 NSMESFGVLPNKVVYNTIVS 245
Score = 69.3 bits (168), Expect = 1e-09
Identities = 39/136 (28%), Positives = 66/136 (48%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
G+L+ + + F+S+ + + ++ YN LQ ++ +F E K M+ G+ P +Y
Sbjct: 325 GMLEEAKTLFESITGN--DDLSGLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGLWPSIY 382
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+LM LC L DA + M + G P+ ++G L+ GYC G L++ M
Sbjct: 383 SYNILMDGLCKLGMLSDANAIVGLMKRNGVVPDSVTYGCLLHGYCSVGKVDAAKSLLQEM 442
Query: 53 ESFGCSPNMVIFNTLI 6
C PN N L+
Sbjct: 443 MRNSCMPNAYTCNILL 458
>ref|XP_010489330.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Camelina sativa] gi|727636432|ref|XP_010489331.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g17140 [Camelina sativa]
gi|727636434|ref|XP_010489332.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g17140
[Camelina sativa]
Length = 879
Score = 157 bits (397), Expect = 4e-36
Identities = 72/140 (51%), Positives = 100/140 (71%)
Frame = -2
Query: 422 AASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSP 243
A S +D + FQ +RS P N P I LYN L + IK+ R + V YKDM++ GV+P
Sbjct: 91 AKSSYIDKAFPQFQLIRSRFPENKPGIYLYNVLFESCIKERRVEFVSWLYKDMVLCGVAP 150
Query: 242 RVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELM 63
+ YT NLL+ ALCDS +D AR++F+EMP+KGC+PN+F+FGIL+ GYCK+GL +GLEL+
Sbjct: 151 QTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLPDKGLELL 210
Query: 62 ECMESFGCSPNMVIFNTLIA 3
M SFG PN V++NT+++
Sbjct: 211 NSMGSFGVLPNKVVYNTIVS 230
Score = 73.2 bits (178), Expect = 9e-11
Identities = 40/136 (29%), Positives = 69/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
GLL+ + + F+S+R + + S++ YN LQ ++ +F E K M+ G+ P ++
Sbjct: 310 GLLEDAKTLFESIREN--DDLTSLQSYNIWLQGLVRHGKFIEAETVLKQMVDKGIGPSIF 367
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+L+ LC L DA+ + M + G P+ ++G L+ GYC G L++ M
Sbjct: 368 SYNILIDGLCKLGMLSDAKTVVGVMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 427
Query: 53 ESFGCSPNMVIFNTLI 6
C PN N L+
Sbjct: 428 MRNNCLPNAYTCNILL 443
>ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Populus trichocarpa]
gi|550341611|gb|ERP62640.1| hypothetical protein
POPTR_0004s21560g [Populus trichocarpa]
Length = 874
Score = 156 bits (395), Expect = 6e-36
Identities = 75/140 (53%), Positives = 100/140 (71%)
Frame = -2
Query: 422 AASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSP 243
A SGL ++S F+SLR P NPPSI LYN LL+ K+ R D V KDM+ +GVSP
Sbjct: 86 AKSGLFGKAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSP 145
Query: 242 RVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELM 63
YT N+L+ LCDS LDDAR++F++MP+KGC PN++SFGIL+ GYC++G + +GLEL+
Sbjct: 146 ETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELL 205
Query: 62 ECMESFGCSPNMVIFNTLIA 3
M G SPN V++NTLI+
Sbjct: 206 GEMRRLGFSPNKVVYNTLIS 225
Score = 64.7 bits (156), Expect = 3e-08
Identities = 37/136 (27%), Positives = 69/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
G+L+ + + F+ ++ + N + + YN L ++ + ++ K+M+ G+ P VY
Sbjct: 305 GMLEEARALFEKMK--VSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVY 362
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N++M LC + L DAR + M G P+ ++ L+ GYC +G + ++ M
Sbjct: 363 SYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM 422
Query: 53 ESFGCSPNMVIFNTLI 6
GCSPN N L+
Sbjct: 423 MRDGCSPNNYTCNILL 438
>ref|XP_010467466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Camelina sativa]
Length = 878
Score = 156 bits (394), Expect = 8e-36
Identities = 72/140 (51%), Positives = 99/140 (70%)
Frame = -2
Query: 422 AASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSP 243
A S +D + FQ +RS P N P I LYN L + IK+ R + V YKDM++ GV+P
Sbjct: 90 AKSSYIDKAFPQFQLVRSRFPENKPGIYLYNVLFESCIKERRVEFVSWLYKDMVLCGVAP 149
Query: 242 RVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELM 63
+ YT NLL+ ALCDS +D AR++F+EMP+KGC PN+F+FGIL+ GYCK+GL +GLEL+
Sbjct: 150 QTYTFNLLIRALCDSSCVDAARELFDEMPEKGCNPNEFTFGILVRGYCKAGLPDRGLELL 209
Query: 62 ECMESFGCSPNMVIFNTLIA 3
M SFG PN V++NT+++
Sbjct: 210 NSMGSFGVLPNKVVYNTIVS 229
Score = 73.2 bits (178), Expect = 9e-11
Identities = 40/136 (29%), Positives = 69/136 (50%)
Frame = -2
Query: 413 GLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVY 234
GLL+ + + F+S+R + + S++ YN LQ ++ +F E K M+ G+ P ++
Sbjct: 309 GLLEDAKTLFESIREN--DDLTSLQSYNIWLQGLVRHGKFIEAETVLKQMVDKGIGPSIF 366
Query: 233 TINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECM 54
+ N+L+ LC L DA+ + M + G P+ ++G L+ GYC G L++ M
Sbjct: 367 SYNILIDGLCKLGMLSDAKTVVGVMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 426
Query: 53 ESFGCSPNMVIFNTLI 6
C PN N L+
Sbjct: 427 MRNNCLPNAYTCNILL 442
>ref|XP_010028839.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Eucalyptus grandis] gi|629089414|gb|KCW55667.1|
hypothetical protein EUGRSUZ_I01520 [Eucalyptus grandis]
Length = 868
Score = 155 bits (393), Expect = 1e-35
Identities = 74/144 (51%), Positives = 107/144 (74%)
Frame = -2
Query: 434 VRSCAASGLLDASLSFFQSLRSHLPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVA 255
V+ A SGL A++S F+SLRS P +PP +YN L++ +++N D V Y+DM+VA
Sbjct: 85 VKLLARSGLPAAAVSHFKSLRSRFPDDPPPGLVYNLLIRACLRENHVDDVLWLYRDMVVA 144
Query: 254 GVSPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQG 75
G+SP YT NLL+ ALC++ RL DAR +F +MPK+GCRPN++SFGIL+ GYC++ L+ QG
Sbjct: 145 GLSPETYTFNLLIGALCEAGRLSDARNLFEKMPKRGCRPNEYSFGILVRGYCRARLTGQG 204
Query: 74 LELMECMESFGCSPNMVIFNTLIA 3
+EL+ M+S G +PN V++NTLI+
Sbjct: 205 MELLNEMKSSGIAPNNVVYNTLIS 228
Score = 66.6 bits (161), Expect = 9e-09
Identities = 33/113 (29%), Positives = 55/113 (48%)
Frame = -2
Query: 344 IKLYNALLQFAIKQNRFDLVEVFYKDMLVAGVSPRVYTINLLMTALCDSCRLDDARKMFN 165
++ YN L I++ + +M+ +GV P +YT N+++ LC + L DAR + +
Sbjct: 329 LESYNIQLLGLIRKGNLLEAQSIINEMIESGVEPSIYTYNIVIDGLCKNGMLSDARTVMH 388
Query: 164 EMPKKGCRPNQFSFGILICGYCKSGLSLQGLELMECMESFGCSPNMVIFNTLI 6
M G P+ S+ L GYC G + +++ M GC PN N L+
Sbjct: 389 SMQSSGVSPDTISYSTLAQGYCSKGKMREARNILQEMMKSGCFPNNYTSNFLL 441
Score = 64.3 bits (155), Expect = 4e-08
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = -2
Query: 425 CAASGLLDASLSFFQSLRSH-LPTNPPSIKLYNALLQFAIKQNRFDLVEVFYKDMLVAGV 249
CAA +L+AS F L L P+ YN +LQ K+ ++ + M G
Sbjct: 266 CAAGKVLEASRIFRDMLTDQELGLPEPNTVTYNLMLQGFCKEGMWEEAKTLGDTMKRKGE 325
Query: 248 SPRVYTINLLMTALCDSCRLDDARKMFNEMPKKGCRPNQFSFGILICGYCKSGLSLQGLE 69
++ + N+ + L L +A+ + NEM + G P+ +++ I+I G CK+G+
Sbjct: 326 LMKLESYNIQLLGLIRKGNLLEAQSIINEMIESGVEPSIYTYNIVIDGLCKNGMLSDART 385
Query: 68 LMECMESFGCSPNMVIFNTL 9
+M M+S G SP+ + ++TL
Sbjct: 386 VMHSMQSSGVSPDTISYSTL 405