BLASTX nr result
ID: Anemarrhena21_contig00038796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00038796
(1818 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005090363.1| DNA-dependent RNA polymerase (mitochondrion)... 318 e-156
ref|YP_002608352.1| DNA-dependent RNA polymerase [Vitis vinifera... 229 e-119
ref|NP_862328.1| hypothetical protein BrnaMpl_p6 [Brassica napus... 238 e-111
gb|AAS15052.1| DNA-directed RNA polymerase [Daucus carota] 185 2e-83
gb|AFI44306.1| RNA polymerase (mitochondrion) [Silene vulgaris] 159 9e-72
emb|CAA71809.1| RNA polymerase [Beta vulgaris subsp. maritima] 165 2e-70
dbj|BAD66791.1| orf598 (mitochondrion) [Beta vulgaris subsp. vul... 179 3e-59
ref|YP_005090412.1| orf2 gene product (mitochondrion) [Boea hygr... 201 1e-57
emb|CBJ20686.1| hypothetical protein [Beta vulgaris subsp. marit... 124 3e-50
ref|NP_064021.1| orf670 gene product (mitochondrion) [Beta vulga... 123 4e-50
dbj|BAD66821.1| orf670 (mitochondrion) [Beta vulgaris subsp. vul... 123 4e-50
emb|CDP19677.1| unnamed protein product [Coffea canephora] 205 1e-49
ref|YP_588349.1| hypothetical protein ZeamMp088 [Zea mays subsp.... 135 2e-47
pir||S22768 130K protein - maize mitochondrial plasmid-like DNA S-2 128 1e-45
sp|P10581.1|RPOP_MAIZE RecName: Full=Probable DNA-directed RNA p... 128 2e-45
emb|CBJ20748.1| hypothetical protein [Beta vulgaris subsp. marit... 124 1e-42
ref|NP_064083.1| orf352 gene product (mitochondrion) [Beta vulga... 121 6e-42
emb|CAQ52970.1| unnamed protein product (mitochondrion) [Lolium ... 151 1e-33
emb|CAQ52964.1| unnamed protein product (mitochondrion) [Lolium ... 150 3e-33
emb|CAQ52967.1| unnamed protein product (mitochondrion) [Lolium ... 149 7e-33
>ref|YP_005090363.1| DNA-dependent RNA polymerase (mitochondrion) [Phoenix dactylifera]
gi|343478415|gb|AEM43903.1| DNA-dependent RNA polymerase
(mitochondrion) [Phoenix dactylifera]
Length = 875
Score = 318 bits (815), Expect(2) = e-156
Identities = 166/280 (59%), Positives = 204/280 (72%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YEEFV+ LA AY GY+FDLPAFMDFRGRIYR+GVLHFHERDL++ LI+F+ G+ L+
Sbjct: 346 ARYEEFVIRLASAYDGYQFDLPAFMDFRGRIYRSGVLHFHERDLSRSLIVFA-GQPKALN 404
Query: 1156 KEDEMDRRKHLACXXXXXXXXXSTLKDSYDWYMSHYLDVQNSDYKLISLAQQASDPFQFL 1335
+ + LAC L D++ WY H + SD L+ A QASDPFQFL
Sbjct: 405 SQLAKTISQDLACAAAFKYKKFFNLDDAFKWYNEHQSLMLASDESLMKFAVQASDPFQFL 464
Query: 1336 ARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPSPDDQIQD 1515
A+ LS D VS+ ++VPVTQDASASAYQIMSYLLLN E+G RTNLLPS D QIQD
Sbjct: 465 AKILSKDIVSN------YHKVPVTQDASASAYQIMSYLLLNQEMGRRTNLLPSSDGQIQD 518
Query: 1516 LYLCLKDELQEFLKKRLDSNKYNILESRLTRKLIKGLFMPLIYGKTVIAMSHDIREEYGS 1695
+Y+CL++EL++FL RLD+NKY ++ S LTRKL+KGLFMPLIYGKTV +M+ DI + YGS
Sbjct: 519 VYMCLQEELKKFLVTRLDANKYAVILSMLTRKLVKGLFMPLIYGKTVSSMAKDIMDHYGS 578
Query: 1696 LLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCS 1815
LL +D + +A LC+EF KYPDI NL+ INLIGWFCS
Sbjct: 579 LLSHKDSYGLAVLCYEFLSLKYPDIVNLLNLINLIGWFCS 618
Score = 265 bits (677), Expect(2) = e-156
Identities = 163/345 (47%), Positives = 205/345 (59%), Gaps = 31/345 (8%)
Frame = +2
Query: 38 IEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQPQCXXXXXXXXXXXXXXQYTLE 217
IE+LTM +DE S++ SS LIKLLI + +AK+YLK Y LE
Sbjct: 3 IEELTMKFDERSIYNSSPNLIKLLISKDLPTAKEYLKT---HLSTEYLPMLNQFGHYMLE 59
Query: 218 AVIIHVLGSLFNSVGDLPMVRVSTLIEQLDSTVRVQAGIKKL-----GVQEGV------- 361
A+IIHVLG +FN V DL +VRVSTL+EQLDS VR QA + G EGV
Sbjct: 60 AIIIHVLGLVFNCVRDLSVVRVSTLLEQLDSAVRDQARFMLIKAAGSGKVEGVVTSKAES 119
Query: 362 -------------KLSLKKVRSLDYRIGKSLVEFLIERKVIIIQNSDSDVSPSTKKKKDP 502
K KV Y IG LV FL+ER +I + + S KK
Sbjct: 120 DKDAVKFDSKGATKKGKVKVTRTHYAIGVHLVNFLVERGLIHLSSEVSFTEVPVVNKKGK 179
Query: 503 FYIP---FAMCNFYISLLPIRLNLPMVSKPLAWKSKVYSPSTLSDIEGGYLSGLTGDFYN 673
YIP +AMCNF SLLPI+LNLPMV PL W S SP+ L+D+ GGYLSG T D YN
Sbjct: 180 GYIPINCYAMCNFDFSLLPIKLNLPMVCNPLPWNSTEESPTMLTDLSGGYLSGPTLDIYN 239
Query: 674 RFRLLTSHNYENFYIKFNHMGFFK---VLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLL 844
RFR+LTS + +FY+ + G+ + +LN LQSQVFEINN+VL +I+ NR+ L E GLL
Sbjct: 240 RFRILTSRDLSHFYVTLKYSGYKRMCTILNSLQSQVFEINNKVLEFILQNRNRLVELGLL 299
Query: 845 MKRLLASVNLQEASDLLRECYAADKGMKSVCNISIILLEFVKCVQ 979
M R LA VNL+EASDLLR Y +DKG+++ C+ +++ E VK VQ
Sbjct: 300 MPRNLAYVNLKEASDLLRFSYFSDKGVQNACSCHVLIKELVKRVQ 344
>ref|YP_002608352.1| DNA-dependent RNA polymerase [Vitis vinifera]
gi|209954148|emb|CAQ77581.1| DNA-dependent RNA
polymerase. This is a family of single chain RNA
polymerases; pfam00940 [Vitis vinifera]
gi|239764752|gb|ACS15222.1| DNA-dependent RNA polymerase
[Vitis vinifera]
Length = 975
Score = 229 bits (584), Expect(2) = e-119
Identities = 131/296 (44%), Positives = 182/296 (61%), Gaps = 15/296 (5%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFS-NGKAPEL 1152
A YE FV+N+A AY GYK LPAF+DFRGRIYRAGVLHFHERDLA+ L+LF+ N + EL
Sbjct: 466 ARYETFVINIASAYEGYKIYLPAFVDFRGRIYRAGVLHFHERDLARSLVLFTCNNPSGEL 525
Query: 1153 SKEDEMDRRKHL--ACXXXXXXXXXSTLKDSYDWYMSHYLDVQNSDYKLISLAQQASDPF 1326
+ D+ + + KDSY WY+ H +S +I LA A+DP+
Sbjct: 526 INHNIDDKEIMFIASAAAAFHYKKFESYKDSYQWYLDHVSMKASSAESIIELALSAADPY 585
Query: 1327 QFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLP----- 1491
QF+++ L + S L ++P+TQDASASAYQIMSY LL+ +L ++TNL+P
Sbjct: 586 QFISKVLC----IESNNKSNLIQIPITQDASASAYQIMSYFLLDNDLALKTNLIPYIDYH 641
Query: 1492 -------SPDDQIQDLYLCLKDELQEFLKKRLDSNKYNILESRLTRKLIKGLFMPLIYGK 1650
S + +I+D+Y L +EL+ + +K L +N +I+ RLTRKL+K LFMP+IYGK
Sbjct: 642 YSPEYDFSDNKKIKDIYTILLEELKVYFRKELTNNLADIVCPRLTRKLVKVLFMPMIYGK 701
Query: 1651 TVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCSA 1818
TVI++++D + + SLL + +A+ + F K YP I NLM I I W SA
Sbjct: 702 TVISIANDFNQHFDSLLDKGECMQLAKKIYIFYKTYYPGIVNLMDLIRNISWLVSA 757
Score = 229 bits (583), Expect(2) = e-119
Identities = 144/356 (40%), Positives = 209/356 (58%), Gaps = 32/356 (8%)
Frame = +2
Query: 8 EKKLMCLQKEIEDLTMNYDE-NSVFKSSMTLIKLLIDDNSISAKDYLKQPQCXXXXXXXX 184
E++L+ +Q IED T YD+ ++++ + LIK++I + ++AK+YLK+ C
Sbjct: 111 EEELISIQTSIEDATFKYDDIKNIYQLTPDLIKIIISKDELTAKEYLKK--CKLTKNDLL 168
Query: 185 XXXXXXQYTLEAVIIHVLGSLFNSVGDLPMVRVSTLIEQLDSTVRVQAGIKKLGVQEGVK 364
QYTLEA+II+V G LFN + +LP VRVSTLIE LD+ VR QA + K E
Sbjct: 169 TLEYFDQYTLEAIIIYVFGVLFNCIQELPAVRVSTLIEHLDTYVRSQAKLLKGYTSEERP 228
Query: 365 LSLKKVRSLD--------------------YRIGKSLVEFLIERKVIIIQNSDS-DVSPS 481
+ ++ S D Y G LVEFL+ RK I + N S S
Sbjct: 229 STKHEINSDDTSSNVKAEENEMANDKMQNNYAFGAFLVEFLVNRKWISLSNELSFHEQYS 288
Query: 482 TKKKKDPFYIP---FAMCNFYISLLPIRLNLPMVSKPLAWKS--KVYSPSTLSDIEGGYL 646
K +YIP +A+CNF ISLLPI+LNLPM+ KPL WK PS+LSD+ GGYL
Sbjct: 289 VTMKNGKYYIPRQLYAICNFDISLLPIKLNLPMICKPLDWKPIRDDIIPSSLSDMRGGYL 348
Query: 647 SGLTGDFYN--RFRLLTSHNYENFYIKFNHMGFFKV---LNRLQSQVFEINNQVLSYIID 811
S +GDFY R+R++T+ + +F+IKF+ + + +N+LQ+Q FEI+ VLS+I++
Sbjct: 349 SIPSGDFYQQKRYRVMTTRDLSHFHIKFDEGKYDDLCLTMNKLQAQSFEIHKDVLSFIMN 408
Query: 812 NRDLLEEKGLLMKRLLASVNLQEASDLLRECYAADKGMKSVCNISIILLEFVKCVQ 979
N +LL + GLLM R LAS+N+ A +LLR Y ++ + VCN +L F++ +Q
Sbjct: 409 NNELLVKYGLLMPRFLASLNINRAVELLRNSYLSNNDLTQVCNYQDLLKVFLERIQ 464
>ref|NP_862328.1| hypothetical protein BrnaMpl_p6 [Brassica napus]
gi|23200585|dbj|BAC16369.1| orf6 [Brassica napus]
Length = 1078
Score = 238 bits (607), Expect(2) = e-111
Identities = 140/299 (46%), Positives = 193/299 (64%), Gaps = 19/299 (6%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAP--E 1149
A YEEF+ LA AYA Y LPAF+DFRGRIYR+GVLHFHERDLAK LI+FSN + E
Sbjct: 467 ARYEEFIFQLADAYADYPLYLPAFLDFRGRIYRSGVLHFHERDLAKSLIIFSNSEKDINE 526
Query: 1150 LS--KEDEMDRR-KHLACXXXXXXXXXSTLKDSYDWYMSHYLDVQNSDYKLISLAQQASD 1320
++ E+ +D +LA S K+SYDW + + Q++ ++ A+ A D
Sbjct: 527 INNFSENRIDSGIYNLAIATGFKYQKFSNYKESYDWIKNELIPNQSN---ILEFARNADD 583
Query: 1321 PFQFLARYL-SNDRVSDEERISG---------LNRVPVTQDASASAYQIMSYLLLNVELG 1470
PFQFL++ L +S+ E+ + LN +PV+QDASASAYQIMS+LLLN +LG
Sbjct: 584 PFQFLSKALYLLYFISENEKGTSFYSSDLRYLLNEIPVSQDASASAYQIMSFLLLNEDLG 643
Query: 1471 IRTNLLPSPDDQIQDLYLCLKDELQEFLKKRLDSNKY----NILESRLTRKLIKGLFMPL 1638
TN++ +D+IQDLY LKDEL E+L K SN Y + +++++ RK +K LFMPL
Sbjct: 644 KGTNMIYGSEDKIQDLYSSLKDELVEYLLKTKCSNDYPQCEDFVKTQIDRKFVKRLFMPL 703
Query: 1639 IYGKTVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCS 1815
IYGKT+++M++DI+ L ++ F IA C EF + K+PDI NLM+ +NL+GWF S
Sbjct: 704 IYGKTIMSMTNDIKLYSERKLPYKAYFKIANDCLEFWRMKFPDIVNLMKLLNLVGWFKS 762
Score = 192 bits (488), Expect(2) = e-111
Identities = 128/333 (38%), Positives = 186/333 (55%), Gaps = 33/333 (9%)
Frame = +2
Query: 8 EKKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQPQCXXXXXXXXX 187
++ L L+ EIE+LT+ +D+ ++FKSS TLI+LL+ D +DYLK
Sbjct: 111 DEDLQKLELEIENLTVKFDKETIFKSSFTLIELLLKDKRCCVRDYLKD---HLPDKCLSA 167
Query: 188 XXXXXQYTLEAVIIHVLGSLFNSVGDLPMVRVSTLIEQLDSTVRVQA------------- 328
+YT+E IIHVLGSLF+ + D+ +R+STLI+ L+ + Q
Sbjct: 168 IYKLNEYTIECGIIHVLGSLFDHLNDINHIRLSTLIDHLEMHIVTQLVLLYRSFNPNLTY 227
Query: 329 -GIKKLGVQEGVKLSL---KKVRSL--------DYRIGKSLVEFLIERKVIIIQNSDSD- 469
+K L + + V L KKV+ +Y +GK LVEF+ ER +I I N ++
Sbjct: 228 YELKYLKLDDYVIYDLVEDKKVKGKPNATIKIRNYILGKKLVEFMTERGIITILNKGNEN 287
Query: 470 VSPSTKKKKDPFYIPFAMCNFYISLLPIRLNLPMVSKPLAWKS-----KVYSPSTLSDIE 634
V+ T+ KD + C F I+LLPI+LNLPM+S P+ W S P+ +SDI+
Sbjct: 288 VNYKTEGYKDNLL--YVECAFDINLLPIKLNLPMISPPVDWYSIKKDNNPNVPTYMSDIK 345
Query: 635 GGYLSGLTGDFYNRFRLLTSHNYENFYIKF--NHMGFFKVLNRLQSQVFEINNQVLSYII 808
GGYL G TG+FYNRF+LLTS N + FY+ F + ++L+ LQ Q F IN +L +I
Sbjct: 346 GGYLVGATGEFYNRFKLLTSKNIDRFYLSFRKDPSNMLEILSFLQRQKFLINKSMLKFIK 405
Query: 809 DNRDLLEEKGLLMKRLLASVNLQEASDLLRECY 907
DNR LE LL+ + LA++N A +LL E +
Sbjct: 406 DNRLALENVDLLIDQCLANINTLAAYELLDEMF 438
>gb|AAS15052.1| DNA-directed RNA polymerase [Daucus carota]
Length = 999
Score = 185 bits (470), Expect(2) = 2e-83
Identities = 114/291 (39%), Positives = 163/291 (56%), Gaps = 11/291 (3%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
AGYE+++L LA AY GY F LPAF+DFRGRIYR+G+LHFHERDLA+ L++F +
Sbjct: 490 AGYEQYILKLAIAYEGYHFYLPAFLDFRGRIYRSGILHFHERDLARSLVIF--------A 541
Query: 1156 KEDEMDRRK---HLACXXXXXXXXXSTLKDSYDWYMSHYLDVQNS-DYKLISLAQQASDP 1323
KED C D+ +W+ + + + LI A A P
Sbjct: 542 KEDSQVSSSIPISFYCAASHLYRSFDNNDDAVEWFEEAKGTFEEAPNDLLIKFACDAKKP 601
Query: 1324 FQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPSP-D 1500
QFL+ + S + + + P+TQDASASAYQ+MSY LL+ +L TNL+ P D
Sbjct: 602 LQFLSCVVVFKEYSTTQDLQAITSYPITQDASASAYQLMSYFLLDKDLAKNTNLIQRPGD 661
Query: 1501 DQIQDLYLCLKDELQEFLKKRLDSNKYN------ILESRLTRKLIKGLFMPLIYGKTVIA 1662
IQD+Y L E+Q ++ D++KY + LTRK++KG+FMP+IYGKT+++
Sbjct: 662 SNIQDIYSYLLKEVQVYIN---DNDKYKNDSLILTVSDNLTRKIVKGIFMPMIYGKTLMS 718
Query: 1663 MSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCS 1815
++E + L + Q +AQ+ ++F K KY + LM I IGWF S
Sbjct: 719 TGIFLQESFSFDLG-KRQNAVAQVFYDFFKVKYSRLNCLMNMIQNIGWFSS 768
Score = 154 bits (388), Expect(2) = 2e-83
Identities = 101/280 (36%), Positives = 153/280 (54%), Gaps = 21/280 (7%)
Frame = +2
Query: 203 QYTLEAVIIHVLGSLFNSVGDLPMVRVSTLIEQLDSTVRVQAGIKK----------LGVQ 352
Q+TLE ++IHVL LFNSV ++R+STLI++LD+TVR Q + K +
Sbjct: 210 QHTLEVLLIHVLSVLFNSVESDSVIRLSTLIDRLDTTVRSQIQLLKNRKSRYEQSISTAK 269
Query: 353 EGVKLSLKKVRSLD--YRIGKSLVEFLIERKVIIIQNSDSDVSPSTKKKKDPFYIP---F 517
GV ++ K S + G L FL + +I I + +KK FY+ +
Sbjct: 270 AGVDIAPKPNGSPKNTFHFGNELASFLERKDLIEISIIGNIEDEPNRKKNGSFYLAKHQY 329
Query: 518 AMCNFYISLLPIRLNLPMVSKPLAWKSKVYS---PSTLSDIEGGYLSGLTGDFYNRFRLL 688
C S LPIR +LPMV KP W+S + P LSD+ GGYLS LT D R+RLL
Sbjct: 330 VHCKIPASDLPIRFSLPMVCKPEDWQSILQDNQKPKYLSDLRGGYLSSLTADVDERYRLL 389
Query: 689 TSHNYENFYIKF---NHMGFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLL 859
+S N +NFY++F N ++N+LQSQ F++N+ LSYI N LL E+GL++ L
Sbjct: 390 SSKNLDNFYLEFHDDNSTELCDIMNKLQSQPFKVNSSFLSYIRQNESLLVEQGLILPSFL 449
Query: 860 ASVNLQEASDLLRECYAADKGMKSVCNISIILLEFVKCVQ 979
+ + +++ + ++ Y + KSV ++ + E +K +Q
Sbjct: 450 SKLQIKDIYEKFKKKYYSYHFSKSV-RLATLFKELMKLIQ 488
>gb|AFI44306.1| RNA polymerase (mitochondrion) [Silene vulgaris]
Length = 1053
Score = 159 bits (401), Expect(2) = 9e-72
Identities = 108/336 (32%), Positives = 168/336 (50%), Gaps = 55/336 (16%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPE-- 1149
A YE+ ++ LAKAY GY PAF+DFRGR+YR+G+ HFHERD A+ LIL N K E
Sbjct: 496 AQYEQTIIMLAKAYDGYSIYYPAFLDFRGRVYRSGIFHFHERDFARSLILIENKKNKEDI 555
Query: 1150 --------------LSKEDEMD--------------RRKHLACXXXXXXXXXSTLKDSY- 1242
L K++ D +R +A S+
Sbjct: 556 EEKKNKEDIDMKENLRKDENNDSHSDSDEIENSENFKRYMIATAFHYKKFNKEDEAQSFI 615
Query: 1243 -DW-----------YMSHYLDVQNSDYKLISLAQQASDP----FQFLARY-------LSN 1353
+W Y+ D++ ++ L +L Q S FQF++ + N
Sbjct: 616 TEWMNNLNSKIENLYIKDNEDIEKNNKILYNLILQESRDAKRVFQFISNIYFLYNPIIYN 675
Query: 1354 DRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPSPDDQIQDLYLCLK 1533
+ + I+ +P+TQDASASAYQIM+Y LL+ + ++TNL+ + D I D+Y K
Sbjct: 676 KKDKENFMINAFQEIPITQDASASAYQIMAYFLLDEGMAMKTNLIINKLDWIIDIYEMFK 735
Query: 1534 DELQEFLKKRLDSNKYNILESRL-TRKLIKGLFMPLIYGKTVIAMSHDIREEYGSLLRFQ 1710
+E E++ K + + SR+ TRK++K +FMP+IYGKTV + D+ G+ L
Sbjct: 736 EECLEYIHKNENDKHFCQTLSRVFTRKIVKNIFMPIIYGKTVNSTGKDLHILLGNDLLKP 795
Query: 1711 DQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCSA 1818
+ F +A+LC+ F + Y D+ + + I L+G C++
Sbjct: 796 ECFKLAKLCYAFWHDTYNDMYSFIDLIGLVGRVCAS 831
Score = 141 bits (356), Expect(2) = 9e-72
Identities = 115/377 (30%), Positives = 175/377 (46%), Gaps = 73/377 (19%)
Frame = +2
Query: 5 DEKKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYL------------- 145
D KL LQ EIE LTM+++E +++K ++ +L N +AK++L
Sbjct: 102 DPIKLKELQVEIEYLTMSFNEENMYKECPNIMSMLTKTNKPNAKEFLRGKYKLDDLGRMQ 161
Query: 146 -------------KQPQCXXXXXXXXXXXXXXQYTLEAVIIHVLGSLFNSVGDLPMVRVS 286
K+ +TLE +++H L LFN V V+
Sbjct: 162 IINKDKELEEGEQKKYVNLLDSNDLDILKELGDHTLECLLVHTLSYLFNIENS---VSVA 218
Query: 287 TLIEQLDSTVRVQAGIKK---LGVQEGVKLSLKKVRSLDYRIGKSLVEFLIERKVIIIQN 457
+L+++++S+VR A I K L V + ++ Y G LVEFL++R++I+I N
Sbjct: 219 SLVDRIESSVRQHAKILKSNRLNVTIDPEKDPYNMKKRSYPFGTGLVEFLLDRRLIVITN 278
Query: 458 SDSD---------------VSPSTKKKKDPFY---IPFAMCNFYISLLPIRLNLPMVSKP 583
D + S+KK K+ FY +A C F +LLPI+LNLPM+ +P
Sbjct: 279 RYMDEMLTINKDDSIPLTFIKQSSKKGKN-FYREKYNYAECTFNTALLPIKLNLPMIYEP 337
Query: 584 LAW------KSKVYSPSTLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNH----- 730
W K KV LS I GGYLS G ++ R++++ NY NF+I F++
Sbjct: 338 SDWTLNENNKGKVMD---LSYIYGGYLSNPFGQIFSNHRVISTPNYGNFHIYFDNNIISY 394
Query: 731 ---------------MGFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLAS 865
+N LQ Q F+IN++ L II+N+ L E+ GLLM L+
Sbjct: 395 DNDGNDNTLTDKEKAKKLCSAINGLQRQAFKINSEHLKNIINNQSLFEKYGLLMPAFLSE 454
Query: 866 VNLQEASDLLRECYAAD 916
+ L A D+LRE Y D
Sbjct: 455 LKLNVACDILREVYNRD 471
>emb|CAA71809.1| RNA polymerase [Beta vulgaris subsp. maritima]
Length = 1014
Score = 165 bits (417), Expect(2) = 2e-70
Identities = 110/291 (37%), Positives = 163/291 (56%), Gaps = 10/291 (3%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YE +L+LA+AY GY PAF+DFRGRIYR+G+ HFHERDLA+ L+LF K
Sbjct: 504 ARYECTILDLAEAYRGYSIYFPAFLDFRGRIYRSGIFHFHERDLARSLLLFE--KTSNYL 561
Query: 1156 KEDEMDR--RKHLACXXXXXXXXXS--TLKDSYDWYMSHYLDVQNSDYKLISL---AQQA 1314
E +MD K+L S L + Y + + L SL AQ A
Sbjct: 562 DEKKMDSLFDKYLIATEFLYSSYSSEKNLPEVMHSYAEKKCQISDPKLVLQSLVIDAQSA 621
Query: 1315 SDPFQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPS 1494
FQFL+ L +V ++ I + VPVTQDASASAYQIMSY LL+ EL +TNL +
Sbjct: 622 KRQFQFLSNTLLLLKVVPDD-IEVMKTVPVTQDASASAYQIMSYFLLDEELAFQTNLF-N 679
Query: 1495 PDDQIQDLYLCLKDELQEFLKKRL---DSNKYNILESRLTRKLIKGLFMPLIYGKTVIAM 1665
+ I D+Y ++ +L ++L+ + + NIL +TR ++K +FMP+IYGKTV +
Sbjct: 680 TNGIINDIYSYIRLDLIQYLEDSIRFENPQLCNILNRVITRSIVKKIFMPIIYGKTVNST 739
Query: 1666 SHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCSA 1818
+ D+ G + ++ ++ LC +F K++Y + + + I L+G C++
Sbjct: 740 TKDLMISLGQDVLPKECVKLSTLCFKFWKDRYSGMNSFIELIRLVGRVCAS 790
Score = 131 bits (329), Expect(2) = 2e-70
Identities = 111/390 (28%), Positives = 181/390 (46%), Gaps = 64/390 (16%)
Frame = +2
Query: 2 SDEKKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLK----------- 148
++++ L LQKEIE+LT+N+ E S+FK+ ++ ++ + +AK++L+
Sbjct: 116 TNKEVLEKLQKEIEELTLNFSEESIFKTCPNIMLMITKTDLPNAKEFLRGEYYTDKVGRI 175
Query: 149 --------------QPQCXXXXXXXXXXXXXXQYTLEAVIIHVLGSLFNSVGDLPMVRVS 286
+ ++T+E +++H L LFN V ++
Sbjct: 176 RILEQKKREGSSVEELHPVLSEYDKGLLKEFGEHTIECLLVHTLSYLFNLDTS---VSLA 232
Query: 287 TLIEQLDSTVRVQAGI---KKLGVQEGVKLSLK---KVRSLDYRIGKSLVEFLIERKVII 448
+LI++++S VR A ++ ++E V K R+ Y G +LVEFL R ++
Sbjct: 233 SLIDRIESNVRQHALFLRNNRICLKEDVDNKQNVSCKARTKSYPFGTALVEFLESRGLVR 292
Query: 449 IQNSDSD---VSPSTK-----------KKKDPFY---IPFAMCNFYISLLPIRLNLPMVS 577
SD +S S++ KK FY +A C F +LLPI+LNLPMV
Sbjct: 293 FTQHHSDEIYISESSEGIPKTFVKRVNKKNKSFYRSSFNYAECMFNTALLPIKLNLPMVF 352
Query: 578 KPLAWKSKVYSPS----TLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNHM---- 733
P W+ + T+SDI GGYLS TG Y+ R+++S + ++F++ F
Sbjct: 353 PPKDWQVHIPDDDRVWLTISDIYGGYLSNPTGQIYSSQRIMSSPDPKSFFVYFGQARSKS 412
Query: 734 ------GFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLL 895
K + LQ F+IN +L I +NR L E KG LM L L AS +L
Sbjct: 413 SFEKANKLCKAITGLQRTAFKINTILLDEIRENRTLFENKGFLMPAFLTKTILANASGIL 472
Query: 896 RECYAAD--KGMKSVCNISIILLEFVKCVQ 979
R Y D K ++S+ S ++ +K +Q
Sbjct: 473 RTTYDNDEYKEIRSIYRYSELVTILMKNMQ 502
>dbj|BAD66791.1| orf598 (mitochondrion) [Beta vulgaris subsp. vulgaris]
Length = 598
Score = 179 bits (455), Expect(2) = 3e-59
Identities = 113/294 (38%), Positives = 171/294 (58%), Gaps = 13/294 (4%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YE+ ++ +A AY GY F LPAF+DFRGRIYR+G+LHFHERDLA+ LIL + E
Sbjct: 153 ARYEQTLIEMASAYDGYTFYLPAFLDFRGRIYRSGILHFHERDLARSLILIEDISIYEDY 212
Query: 1156 KEDEMDRRKHLACXXXXXXXXXSTLKDSYDWYMSHYL-------DVQNSDYKLISLAQQA 1314
+ D T ++ +S L + +S+ LI A+ A
Sbjct: 213 NPEFFDHYVRAFKTAAAYHYRSFTSDEAALCRISQLLHDLKGTDPLLSSEGTLIDFAKGA 272
Query: 1315 SDPFQFLARYLSNDRVSDEERIS--GLNRV---PVTQDASASAYQIMSYLLLNVELGIRT 1479
PFQFLA + V ++ S L+++ P+TQDASASAYQI+SY LL+ L RT
Sbjct: 273 KHPFQFLANLRAIVEVDKVQKKSPFTLDQILSSPITQDASASAYQILSYFLLDDTLAKRT 332
Query: 1480 NLLP-SPDDQIQDLYLCLKDELQEFLKKRLDSNKYNILESRLTRKLIKGLFMPLIYGKTV 1656
NL+P DD+IQD+Y ++ EL+ F+ + + + + +TR L+K +FMP+IYGK+
Sbjct: 333 NLIPMDGDDRIQDVYNHIEIELKSFIAR--EGSVPEEVFKDITRSLVKSIFMPIIYGKSQ 390
Query: 1657 IAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCSA 1818
++ + D+R S+ ++ F+IA LC +F KEK+ + +L+ I L+GWF ++
Sbjct: 391 MSTADDLRGHLRSITTKKECFHIASLCFKFWKEKFAHMDHLIGIIRLLGWFAAS 444
Score = 79.3 bits (194), Expect(2) = 3e-59
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Frame = +2
Query: 569 MVSKPLAWKSKVYSPS-----TLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNHM 733
MV PL W V P +SD++GGYL+ ++G ++R+RLL+S N +NF+I F
Sbjct: 1 MVCPPLDWV--VQHPEGKEWLNISDLKGGYLNSISGLIHDRYRLLSSGNIKNFFIYFGKF 58
Query: 734 ----------GFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEA 883
+V+N+LQSQ F+IN++ L I+ + G LM L N+ +
Sbjct: 59 EDSLSLKKAADLCEVMNKLQSQGFKINSEFLQLILKYEESFVHTGYLMPSFLTKRNINDV 118
Query: 884 SDLLRECY-AADKGMKSVCNISIILLEFVKCVQ 979
S+L+R Y AA++ ++ + + S ++ FV +Q
Sbjct: 119 SELVRNLYIAAEQKLRHLTDYSSLIQTFVTNIQ 151
>ref|YP_005090412.1| orf2 gene product (mitochondrion) [Boea hygrometrica]
gi|340549502|gb|AEK53323.1| hypothetical protein
(mitochondrion) [Boea hygrometrica]
Length = 585
Score = 201 bits (512), Expect(2) = 1e-57
Identities = 116/288 (40%), Positives = 171/288 (59%), Gaps = 10/288 (3%)
Frame = +1
Query: 985 EEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELSKED 1164
E ++ LA AY GY+F LPAF+DFRGRIYR+G+LHFHERDLA+ +I+F A +
Sbjct: 82 ERMIIKLADAYDGYQFYLPAFLDFRGRIYRSGILHFHERDLARSMIMF----ADQSDNNF 137
Query: 1165 EMDRRKHLACXXXXXXXXXS-TLKDSYDWYMSHYLDV---QNSDYKLISLAQQASDPFQF 1332
+ + C S + K++ +W+++ D+ +N D L A +A FQF
Sbjct: 138 NYNIAYYNICIATSFLYKSSISEKEAINWFLNIMDDINSNKNPDDYLFKKASEAKRSFQF 197
Query: 1333 LARYLSNDRVSDEERISGLN----RVPVTQDASASAYQIMSYLLLNVELGIRTNLLPSP- 1497
LA L + I N P+TQDASASAYQIMSY LL+ + +RTNL+P P
Sbjct: 198 LANMLILKDIKSISEIQNYNLFILNTPLTQDASASAYQIMSYFLLDESMAMRTNLIPHPC 257
Query: 1498 DDQIQDLYLCLKDELQEFLKKRL-DSNKYNILESRLTRKLIKGLFMPLIYGKTVIAMSHD 1674
++IQD+Y + +EL+EF+ L D+N + LTRK+ KG+FMP+IYGKT+++ + D
Sbjct: 258 HNEIQDVYSYMLEELKEFINSELQDNNLSKTINGILTRKIAKGIFMPMIYGKTLMSTACD 317
Query: 1675 IREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCSA 1818
++ + S + ++ F +A +C +F K KY + L+R I IGW SA
Sbjct: 318 LKRDLSSFITNKECFELASICFKFWKTKYSHMECLIRLIRHIGWIVSA 365
Score = 51.6 bits (122), Expect(2) = 1e-57
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +2
Query: 749 LNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLLRECYAADKGMK 928
+N+LQSQ F+IN++ L+YI +N D L E LL L+ +N+ + + LLRE Y + +K
Sbjct: 1 MNKLQSQPFQINSKWLNYIKENNDSLVESCLLFPEFLSKINIVKVTLLLREFYMNNADIK 60
Query: 929 SVCNISIILLEFVKCVQGMKNSS*IL 1006
+ + + K +Q +N I+
Sbjct: 61 PYASFNELRQIVYKHIQTSRNERMII 86
>emb|CBJ20686.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 670
Score = 124 bits (311), Expect(2) = 3e-50
Identities = 113/381 (29%), Positives = 167/381 (43%), Gaps = 64/381 (16%)
Frame = +2
Query: 5 DEKKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQP---------- 154
D +LM LQ EIE+LTM Y E S++ L++L I+ + AKD+LK
Sbjct: 107 DYSQLMALQNEIENLTMTYYEESIYHCQPALMRLFINSDLPCAKDFLKGQFKVDKNSGDT 166
Query: 155 ---------------------QCXXXXXXXXXXXXXXQYTLEAVIIHVLGSLFNSVGDLP 271
YTLE ++IHVL SLF
Sbjct: 167 SSRIKIIPHSKGNSSENSKDYMDLLTSEEKNMLSFFGPYTLEWLLIHVLSSLFRIQSS-- 224
Query: 272 MVRVSTLIEQLDSTVRVQAGIKKLGVQEG-------VKLSLKKV--RSLDYRIGKSLVEF 424
VR +++IE+++S VR A I L ++G V KK S+ Y G +L+EF
Sbjct: 225 -VRCASMIERIESLVRRNAHI--LSHKDGNPSTHTPVSTYCKKESNNSISYPFGTALIEF 281
Query: 425 LIERKVIIIQNSD-----SDVSPSTKKKKDPFYIPFAM---CNFYISLLPIRLNLPMVSK 580
++ER +I ++ D P KKKK Y A+ C F SLLP++L LPMV
Sbjct: 282 MVERGLIDLKVRDVLSVQGGNKPEIKKKKGSRYRSSALYVECKFDTSLLPMKLQLPMVCM 341
Query: 581 PLAWKSKVYSPS-----TLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNH----- 730
P W V +S + GGYL+ D + LL++ + NF++ F
Sbjct: 342 PRDWSYDVSESQNSEYLNISSLSGGYLNDHLNDGNS---LLSTGDISNFFLYFGKSKKNE 398
Query: 731 -----MGFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLL 895
V+N+LQ+Q F+IN L+++ N D L KG LM L +N +E D +
Sbjct: 399 SHKKAQSLCTVMNKLQNQGFKINEGFLNFLKRNDDFLVRKGFLMPEL--RINFKEVIDKV 456
Query: 896 RECYA-ADKGMKSVCNISIIL 955
R+ Y D+ + N ++
Sbjct: 457 RQLYLDEDRSFHTSVNFDAVM 477
Score = 104 bits (260), Expect(2) = 3e-50
Identities = 77/193 (39%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YE V+ A AY GY F LPAF+DFRGRIYR+G+LHFHERDLA+ LILF+N LS
Sbjct: 487 ARYERTVIETASAYVGYTFYLPAFLDFRGRIYRSGILHFHERDLARSLILFNN---VNLS 543
Query: 1156 KEDEMDRRK----HLACXXXXXXXXXSTLKDSYDWYMSHYLDVQNSDYK----------- 1290
K D RK +L S KD+Y ++ + ++ + D K
Sbjct: 544 KYQNCDLRKVYDTYLTAGGFHRQSFTSN-KDAYVYFNAQIDEISSMDEKSPMELSPSVRE 602
Query: 1291 -------LISLAQQASDPFQFL--------ARYLSNDRVSDEERISGLNRVPVTQDASAS 1425
I + A +PFQ+L Y R S E +S VP+TQDASAS
Sbjct: 603 CKNIDEVYILYSLGAKNPFQYLMFLSGVLKINYYQYRRSSVEYLLS----VPITQDASAS 658
Query: 1426 AYQIMSYLLLNVE 1464
AYQI+ Y++ VE
Sbjct: 659 AYQII-YIIFAVE 670
>ref|NP_064021.1| orf670 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|9838496|ref|NP_064108.1| orf670 gene product
(mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435078|ref|YP_004222296.1| hypothetical protein
BevumaM_p058 [Beta vulgaris subsp. maritima]
gi|323435132|ref|YP_004222350.1| hypothetical protein
BevumaM_p117 [Beta vulgaris subsp. maritima]
gi|346683169|ref|YP_004842101.1| hypothetical protein
BemaM_p054 [Beta macrocarpa]
gi|346683223|ref|YP_004842155.1| hypothetical protein
BemaM_p111 [Beta macrocarpa] gi|9049322|dbj|BAA99332.1|
orf670 (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|9087358|dbj|BAA99502.1| orf670 (mitochondrion) [Beta
vulgaris subsp. vulgaris] gi|317905583|emb|CBJ13995.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|317905631|emb|CBJ14031.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439811|emb|CBJ17522.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|319439865|emb|CBJ17570.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500087|emb|CBX24903.1|
hypothetical protein [Beta macrocarpa]
gi|345500141|emb|CBX24960.1| hypothetical protein [Beta
macrocarpa] gi|384977890|emb|CBL54112.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 670
Score = 123 bits (309), Expect(2) = 4e-50
Identities = 113/381 (29%), Positives = 167/381 (43%), Gaps = 64/381 (16%)
Frame = +2
Query: 5 DEKKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQP---------- 154
D +LM LQ EIE+LTM Y E S++ L++L I+ + AKD+LK
Sbjct: 107 DYSQLMALQNEIENLTMTYYEESIYHCQPALMRLFINSDLPCAKDFLKGQFKVDKNSGDT 166
Query: 155 ---------------------QCXXXXXXXXXXXXXXQYTLEAVIIHVLGSLFNSVGDLP 271
YTLE ++IHVL SLF
Sbjct: 167 SSRIKIIPHSKGNSSENSKDYMDLLTSEEKNMLSFFGPYTLEWLLIHVLSSLFRIQSS-- 224
Query: 272 MVRVSTLIEQLDSTVRVQAGIKKLGVQEG-------VKLSLKKV--RSLDYRIGKSLVEF 424
VR +++IE+++S VR A I L ++G V KK S+ Y G +L+EF
Sbjct: 225 -VRCASMIERIESLVRRNAHI--LSHKDGNPSTHTPVSTYCKKESNNSISYPFGTALIEF 281
Query: 425 LIERKVIIIQNSD-----SDVSPSTKKKKDPFYIPFAM---CNFYISLLPIRLNLPMVSK 580
++ER +I ++ D P KKKK Y A+ C F SLLP++L LPMV
Sbjct: 282 MVERGLIDLKVRDVLSVQGGNKPEIKKKKGYRYRSSALYVECKFDTSLLPMKLQLPMVCM 341
Query: 581 PLAWKSKVYSPS-----TLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNH----- 730
P W V +S + GGYL+ D + LL++ + NF++ F
Sbjct: 342 PRDWSYDVSESQNSEYLNISSLSGGYLNDHLNDGNS---LLSTGDISNFFLYFGKSKKNE 398
Query: 731 -----MGFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLL 895
V+N+LQ+Q F+IN L+++ N D L KG LM L +N +E D +
Sbjct: 399 SHKKAQSLCTVMNKLQNQGFKINEGFLNFLKRNDDFLVRKGFLMPEL--RINFKEVIDKV 456
Query: 896 RECYA-ADKGMKSVCNISIIL 955
R+ Y D+ + N ++
Sbjct: 457 RQLYLDEDRSFHTSVNFDAVM 477
Score = 104 bits (260), Expect(2) = 4e-50
Identities = 77/193 (39%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YE V+ A AY GY F LPAF+DFRGRIYR+G+LHFHERDLA+ LILF+N LS
Sbjct: 487 ARYERTVIETASAYVGYTFYLPAFLDFRGRIYRSGILHFHERDLARSLILFNN---VNLS 543
Query: 1156 KEDEMDRRK----HLACXXXXXXXXXSTLKDSYDWYMSHYLDVQNSDYK----------- 1290
K D RK +L S KD+Y ++ + ++ + D K
Sbjct: 544 KYQNCDLRKVYDTYLTAGGFHRQSFTSN-KDAYVYFNAQIDEISSMDEKSPMELSPSVRE 602
Query: 1291 -------LISLAQQASDPFQFL--------ARYLSNDRVSDEERISGLNRVPVTQDASAS 1425
I + A +PFQ+L Y R S E +S VP+TQDASAS
Sbjct: 603 CKNIDEVYILYSLGAKNPFQYLMFLSGVLKINYYQYRRSSVEYLLS----VPITQDASAS 658
Query: 1426 AYQIMSYLLLNVE 1464
AYQI+ Y++ VE
Sbjct: 659 AYQII-YIIFAVE 670
>dbj|BAD66821.1| orf670 (mitochondrion) [Beta vulgaris subsp. vulgaris]
Length = 670
Score = 123 bits (309), Expect(2) = 4e-50
Identities = 113/381 (29%), Positives = 167/381 (43%), Gaps = 64/381 (16%)
Frame = +2
Query: 5 DEKKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQP---------- 154
D +LM LQ EIE+LTM Y E S++ L++L I+ + AKD+LK
Sbjct: 107 DYSQLMALQNEIENLTMTYYEESIYHCQPALMRLFINSDLPCAKDFLKGQFKVDKNSGDT 166
Query: 155 ---------------------QCXXXXXXXXXXXXXXQYTLEAVIIHVLGSLFNSVGDLP 271
YTLE ++IHVL SLF
Sbjct: 167 SSRIKIIPHSKGNSSENSKDYMDLLTSEEKNMLSFFGPYTLEWLLIHVLSSLFRIQSS-- 224
Query: 272 MVRVSTLIEQLDSTVRVQAGIKKLGVQEG-------VKLSLKKV--RSLDYRIGKSLVEF 424
VR +++IE+++S VR A I L ++G V KK S+ Y G +L+EF
Sbjct: 225 -VRCASMIERIESLVRRNAHI--LSHKDGNPSTHTPVSTYCKKESNNSISYPFGTALIEF 281
Query: 425 LIERKVIIIQNSD-----SDVSPSTKKKKDPFYIPFAM---CNFYISLLPIRLNLPMVSK 580
++ER +I ++ D P KKKK Y A+ C F SLLP++L LPMV
Sbjct: 282 MVERGLIDLKVRDVLSVQGGNKPEIKKKKGYRYRSSALYVECKFDTSLLPMKLQLPMVCM 341
Query: 581 PLAWKSKVYSPS-----TLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNH----- 730
P W V +S + GGYL+ D + LL++ + NF++ F
Sbjct: 342 PRDWSYDVSESQNSEYLNISSLSGGYLNDHLNDGNS---LLSTGDISNFFLYFGKSKKNE 398
Query: 731 -----MGFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLL 895
V+N+LQ+Q F+IN L+++ N D L KG LM L +N +E D +
Sbjct: 399 SHKKAQSLCTVMNKLQNQGFKINEGFLNFLKRNDDFLVRKGFLMPEL--RINFKEVIDKV 456
Query: 896 RECYA-ADKGMKSVCNISIIL 955
R+ Y D+ + N ++
Sbjct: 457 RQLYLDEDRSFHTSVNFDAVM 477
Score = 104 bits (260), Expect(2) = 4e-50
Identities = 77/193 (39%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YE V+ A AY GY F LPAF+DFRGRIYR+G+LHFHERDLA+ LILF+N LS
Sbjct: 487 ARYERTVIETASAYVGYTFYLPAFLDFRGRIYRSGILHFHERDLARSLILFNN---VNLS 543
Query: 1156 KEDEMDRRK----HLACXXXXXXXXXSTLKDSYDWYMSHYLDVQNSDYK----------- 1290
K D RK +L S KD+Y ++ + ++ + D K
Sbjct: 544 KYQNCDLRKVYDTYLTAGGFHRQSFTSN-KDAYVYFNAQIDEISSMDEKSPMELSPSVRE 602
Query: 1291 -------LISLAQQASDPFQFL--------ARYLSNDRVSDEERISGLNRVPVTQDASAS 1425
I + A +PFQ+L Y R S E +S VP+TQDASAS
Sbjct: 603 CKNIDEVYILYSLGAKNPFQYLMFLSGVLKINYYQYRRSSVEYLLS----VPITQDASAS 658
Query: 1426 AYQIMSYLLLNVE 1464
AYQI+ Y++ VE
Sbjct: 659 AYQII-YIIFAVE 670
>emb|CDP19677.1| unnamed protein product [Coffea canephora]
Length = 375
Score = 205 bits (521), Expect = 1e-49
Identities = 113/286 (39%), Positives = 173/286 (60%), Gaps = 7/286 (2%)
Frame = +1
Query: 982 YEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELSKE 1161
YE+ ++ LA AY GY FDLPAF+DFRGRI R+G+LHFHERDLA+ LILF++G++ +
Sbjct: 28 YEQLIIKLASAYDGYHFDLPAFLDFRGRICRSGILHFHERDLARSLILFADGQSINNTTN 87
Query: 1162 DEMDR--RKHLACXXXXXXXXXSTLKDSYDWYMSHYLDVQNSDYKLIS----LAQQASDP 1323
++ ST+++S DW ++N K+I +++ P
Sbjct: 88 QSINNTINPSFLASAAFHYQSFSTIEESVDW-------LRNQGDKIIQNPILYSREGKHP 140
Query: 1324 FQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPSPDD 1503
FQFL+ ++ + ++ + + +P+TQDASASAYQIMSY LL+ L RTNL+PS D
Sbjct: 141 FQFLSNLIA---IKTAKQNNIIPSIPITQDASASAYQIMSYFLLDETLAKRTNLIPSSDG 197
Query: 1504 QIQDLYLCLKDELQEFLKKRLDSNKYNILESRLTRKLIKGLFMPLIYGKTVIAMSHDIRE 1683
+ D+Y L +EL+E++K D+N ++ LTRK++KG+FMP+IYGKT+ + + D++E
Sbjct: 198 KSMDIYSLLLEELREYMKTEHDNNLSKVVCDLLTRKIVKGIFMPIIYGKTIKSTADDLKE 257
Query: 1684 -EYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGWFCSA 1818
+ + +A +C +F K KY + L+R I IGW SA
Sbjct: 258 TPLYQFITGNECTKVASVCFQFWKTKYHGLECLIRLIRNIGWIASA 303
>ref|YP_588349.1| hypothetical protein ZeamMp088 [Zea mays subsp. mays]
gi|40794997|gb|AAR91041.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 1159
Score = 135 bits (341), Expect(2) = 2e-47
Identities = 95/303 (31%), Positives = 151/303 (49%), Gaps = 27/303 (8%)
Frame = +1
Query: 982 YEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILF--SNGKAPELS 1155
+E + + +A+AY YK P F+DFRGR YR G HFHERDL + LI+F S+ A
Sbjct: 574 FELYTMKIAEAYLDYKIYFPIFLDFRGRNYRHGPFHFHERDLVRSLIIFDESDDSAAHTI 633
Query: 1156 KEDEMDRRKH-LACXXXXXXXXXSTLKDSYDWYMSHYLDVQNS------DYKLISLAQQA 1314
D+ DR H +D+ ++ D+ + D + +L
Sbjct: 634 NSDDEDRILHNFLISAAYHKSKFGVYQDAMEFISKIIPDMVSKPTFFEKDIFMDTLC--C 691
Query: 1315 SDPFQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPS 1494
PFQ+++ +S +D +S L PV+QDASASAYQ+MSY LL+++ GI TNLL +
Sbjct: 692 RHPFQYISSCISLKTYADTGDLSVLRYTPVSQDASASAYQMMSYFLLDIDYGIHTNLLKT 751
Query: 1495 PDDQ---IQDLYLCLKD------------ELQEFLKKRLDSNKYNILE---SRLTRKLIK 1620
P+ I+D+Y ++D EL L R + ++ ++L S R ++K
Sbjct: 752 PNTDGRYIRDIYEFMRDCLINYLIAEEKIELVIKLLTRNEKDQESVLAKIVSIFDRNVVK 811
Query: 1621 GLFMPLIYGKTVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLI 1800
+FMP++YGKT + D+ + + I++ + KE + + +LM IN +
Sbjct: 812 KMFMPMMYGKTDYTLKKDVEDLLKGKSDSEGINLISKHISTYWKENFGKMKDLMDLINYV 871
Query: 1801 GWF 1809
WF
Sbjct: 872 SWF 874
Score = 83.2 bits (204), Expect(2) = 2e-47
Identities = 93/355 (26%), Positives = 149/355 (41%), Gaps = 60/355 (16%)
Frame = +2
Query: 11 KKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQPQCXXXXXXXXXX 190
++L +Q +IE +TM + E +V++S L I+ + +AKDYL
Sbjct: 190 EELKGIQTKIERMTMYFYEANVYESLGQLKNKFINIDEQTAKDYLLDK--LEKPDDLDIV 247
Query: 191 XXXXQYTLEAVIIHVLGSLFNSVG-DLPMVRVSTLIEQLDSTVRVQ-------------- 325
YTLE +++ VL FN + V+V+TL+ +LDS +++
Sbjct: 248 RAMGTYTLECIVVFVLSKQFNVFALEKASVQVATLVSELDSAAKIEYNRIIAEGRKRKKA 307
Query: 326 -AGIKKLGVQEGVKL---------------------------SLKKVRSLDYR---IGKS 412
G K++ E + L + K+VR ++ IG++
Sbjct: 308 KRGDKQINEDENILLQDKGVDTFNGDVHSELDRKKKSISKQTNRKRVRISKHKEPGIGEA 367
Query: 413 LVEFLIERKVIIIQNSDSDVSPSTKKKKDPFYIPFAMCNFYISLLPIRLNLPMVSKPLAW 592
L +L RK+I ++ KK K+ Y + C F I LP LPMV P W
Sbjct: 368 LFGWLASRKLIEVKKPVFLFDKKNKKPKNVIYPGYVDCLFDIKDLPFCSTLPMVYPPADW 427
Query: 593 K------SKVYSP-----STLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNHMGF 739
+ ++V P + LS GGYL+ L + + LL+ +Y F I +
Sbjct: 428 ELRPTATAEVSDPYITNLTPLSSYRGGYLTTLQRESGDSPTLLSEKDYGVFDIHIDRERS 487
Query: 740 FKVLN---RLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLL 895
VL+ +LQ Q + IN V +I + +L GLL + LA +EA LL
Sbjct: 488 QPVLSAVKKLQRQPYRINKLVYDFIQKHWSVLVSVGLLRPKNLALFKRKEALRLL 542
>pir||S22768 130K protein - maize mitochondrial plasmid-like DNA S-2
Length = 1159
Score = 128 bits (321), Expect(2) = 1e-45
Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 25/301 (8%)
Frame = +1
Query: 982 YEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILF--SNGKAPELS 1155
+E + + +A+AY YK P F+DFRGR YR G HFHERDL + LI+F S+ A
Sbjct: 574 FELYTMKIAEAYLDYKIYFPIFLDFRGRNYRHGPFHFHERDLVRSLIIFDESDDSAAHTI 633
Query: 1156 KEDEMDRRKH-LACXXXXXXXXXSTLKDSYDWYMSHYLDVQNS----DYKLISLAQQASD 1320
D DR H +++ ++ + D+Q+ + +
Sbjct: 634 NSDVGDRILHNFLISAAYHKSKFGVYREALEFIYNKIEDMQSKPTFFEKDIFVDTLCCRH 693
Query: 1321 PFQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPSPD 1500
PFQ+++ +S +D + +S L PV QDASASAYQIMSY LL+++ GI TNLL +
Sbjct: 694 PFQYISSCISLKTYADTKDLSVLRYTPVFQDASASAYQIMSYFLLDIDYGIHTNLLKKTN 753
Query: 1501 DQ---IQDLY---------LCLKDELQEFLKKRLDSNKYN------ILESRLTRKLIKGL 1626
I+D+Y + +E E K L N+ + + S R ++K +
Sbjct: 754 TDGRYIRDIYEFMRGCLIKYLIAEEKIELAIKLLTPNEKDQESVLAKIVSIFDRNVVKKM 813
Query: 1627 FMPLIYGKTVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGW 1806
FMP++YGKT + D+ + + I++ + K + + +LM IN + W
Sbjct: 814 FMPMMYGKTDYTLKKDVEDLLKGKSDSEGINLISKHISTYWKVNFGKMKDLMDLINYVSW 873
Query: 1807 F 1809
F
Sbjct: 874 F 874
Score = 85.5 bits (210), Expect(2) = 1e-45
Identities = 94/355 (26%), Positives = 149/355 (41%), Gaps = 60/355 (16%)
Frame = +2
Query: 11 KKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQPQCXXXXXXXXXX 190
++L +Q +IE +TM + E +V++S L I+ + +AKDYL
Sbjct: 190 EELKGIQTKIERMTMYFYEANVYESLGQLKNKFINIDEQTAKDYLLDK--LEKPDDLDIV 247
Query: 191 XXXXQYTLEAVIIHVLGSLFNSVG-DLPMVRVSTLIEQLDSTVRVQ-------------- 325
YTLE +++ VL FN D V+V+TL+ +LDS +++
Sbjct: 248 RAMGTYTLECIVVFVLSKQFNVFALDKASVQVATLVSELDSAAKIEYNRIIAEDRKRKKA 307
Query: 326 -AGIKKLGVQEGVKL---------------------------SLKKVRSLDYR---IGKS 412
G K++ E + L + K+VR ++ IG++
Sbjct: 308 KRGDKQINEDENILLQDKGVDTFNGDVHSELDRKKKSISKQTNRKRVRISKHKEPGIGEA 367
Query: 413 LVEFLIERKVIIIQNSDSDVSPSTKKKKDPFYIPFAMCNFYISLLPIRLNLPMVSKPLAW 592
L +L RK+I ++ KK K+ Y + C F I LP LPMV P W
Sbjct: 368 LFGWLASRKLIEVKKPVFLFDKKNKKPKNVIYPGYVDCLFDIKDLPFCSTLPMVYPPADW 427
Query: 593 K------SKVYSP-----STLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNHMGF 739
+ ++V P + LS GGYL+ L + + LL+ +Y F I +
Sbjct: 428 ELRPTATAEVSDPYITNLTPLSSYRGGYLTSLQRESGDSPTLLSEKDYGVFDIHIDRERS 487
Query: 740 FKVLN---RLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLL 895
VL+ +LQ Q + IN V +I + +L GLL + LA +EA LL
Sbjct: 488 QPVLSAVKKLQRQPYRINKLVYDFIQKHWSVLVSVGLLRPKNLALFKRKEALRLL 542
>sp|P10581.1|RPOP_MAIZE RecName: Full=Probable DNA-directed RNA polymerase; AltName: Full=S-2
DNA ORF1
Length = 1098
Score = 128 bits (321), Expect(2) = 2e-45
Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 25/301 (8%)
Frame = +1
Query: 982 YEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILF--SNGKAPELS 1155
+E + + +A+AY YK P F+DFRGR YR G HFHERDL + LI+F S+ A
Sbjct: 513 FELYTMKIAEAYLDYKIYFPIFLDFRGRNYRHGPFHFHERDLVRSLIIFDESDDSAAHTI 572
Query: 1156 KEDEMDRRKH-LACXXXXXXXXXSTLKDSYDWYMSHYLDVQNS----DYKLISLAQQASD 1320
D DR H +++ ++ + D+Q+ + +
Sbjct: 573 NSDVGDRILHNFLISAAYHKSKFGVYREALEFIYNKIEDMQSKPTFFEKDIFVDTLCCRH 632
Query: 1321 PFQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLLNVELGIRTNLLPSPD 1500
PFQ+++ +S +D + +S L PV QDASASAYQIMSY LL+++ GI TNLL +
Sbjct: 633 PFQYISSCISLKTYADTKDLSVLRYTPVFQDASASAYQIMSYFLLDIDYGIHTNLLKKTN 692
Query: 1501 DQ---IQDLY---------LCLKDELQEFLKKRLDSNKYN------ILESRLTRKLIKGL 1626
I+D+Y + +E E K L N+ + + S R ++K +
Sbjct: 693 TDGRYIRDIYEFMWGCLIKYLIAEEKIELAIKLLTPNEKDQESVLAKIVSIFDRNVVKKM 752
Query: 1627 FMPLIYGKTVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLIGW 1806
FMP++YGKT + D+ + + I++ + K + + +LM IN + W
Sbjct: 753 FMPMMYGKTDYTLKKDVEDLLKGKSDSEGINLISKHISTYWKVNFGKMKDLMDLINYVSW 812
Query: 1807 F 1809
F
Sbjct: 813 F 813
Score = 84.3 bits (207), Expect(2) = 2e-45
Identities = 94/355 (26%), Positives = 149/355 (41%), Gaps = 60/355 (16%)
Frame = +2
Query: 11 KKLMCLQKEIEDLTMNYDENSVFKSSMTLIKLLIDDNSISAKDYLKQPQCXXXXXXXXXX 190
++L +Q +IE +TM + E +V++S L I+ + +AKDYL
Sbjct: 129 EELKGIQTKIERMTMYFYEANVYESLGQLKNKFINIDEQTAKDYLLDK--LEKPDDLDIV 186
Query: 191 XXXXQYTLEAVIIHVLGSLFNSVG-DLPMVRVSTLIEQLDSTVRVQA------------- 328
YTLE +++ VL FN D V+V+TL+ +LDS +++
Sbjct: 187 RAMGTYTLECIVVFVLSKQFNVFALDKASVQVATLVSELDSAAKIEYNRIIAEDRKRKKA 246
Query: 329 --GIKKLGVQEGVKL---------------------------SLKKVRSLDYR---IGKS 412
G K++ E + L + K+VR ++ IG++
Sbjct: 247 KWGDKQINEDENILLQDKGVDTFNGDVHSELDRKKKSISKQTNRKRVRISKHKEPGIGEA 306
Query: 413 LVEFLIERKVIIIQNSDSDVSPSTKKKKDPFYIPFAMCNFYISLLPIRLNLPMVSKPLAW 592
L +L RK+I ++ KK K+ Y + C F I LP LPMV P W
Sbjct: 307 LFGWLASRKLIEVKKPVFLFDKKNKKPKNVIYPGYVDCLFDIKDLPFCSTLPMVYPPADW 366
Query: 593 K------SKVYSP-----STLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNHMGF 739
+ ++V P + LS GGYL+ L + + LL+ +Y F I +
Sbjct: 367 ELWPTATAEVSDPYITNLTPLSSYRGGYLTSLQRESGDSPTLLSEKDYGVFDIHIDRERS 426
Query: 740 FKVLN---RLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEASDLL 895
VL+ +LQ Q + IN V +I + +L GLL + LA +EA LL
Sbjct: 427 QPVLSAVKKLQWQPYRINKLVYDFIQKHWSVLVSVGLLRPKNLALFKRKEALRLL 481
>emb|CBJ20748.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 352
Score = 124 bits (310), Expect(2) = 1e-42
Identities = 82/195 (42%), Positives = 111/195 (56%), Gaps = 13/195 (6%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YE+ ++ +A AY GY F LPAF+DFRGRIYR+G+LHFHERDLA+ LIL + E S
Sbjct: 153 ARYEQTLIEMASAYDGYTFYLPAFLDFRGRIYRSGILHFHERDLARSLILIEDISIYEDS 212
Query: 1156 KEDEMDRRKHLACXXXXXXXXXSTLKDSYDWYMSHYL-------DVQNSDYKLISLAQQA 1314
+ D T ++ +S L + +S+ LI A+ A
Sbjct: 213 NPEFFDHYVRAFKTAAAYHYRSFTSDEAALCRISQLLHDLKGTDPLLSSEGTLIDFAKGA 272
Query: 1315 SDPFQFLARYLSNDRVSDEERIS--GLNRV---PVTQDASASAYQIMSYLLLNVELGIRT 1479
PFQFLA + V ++ S L+++ P+TQDASASAYQI+SY LL+ L RT
Sbjct: 273 KHPFQFLANLRAIVEVDKVQKKSPFTLDQILSSPITQDASASAYQILSYFLLDDTLAKRT 332
Query: 1480 NLLP-SPDDQIQDLY 1521
NL+P DD+IQD+Y
Sbjct: 333 NLIPMDGDDRIQDVY 347
Score = 79.3 bits (194), Expect(2) = 1e-42
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Frame = +2
Query: 569 MVSKPLAWKSKVYSPS-----TLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNHM 733
MV PL W V P +SD++GGYL+ ++G ++R+RLL+S N +NF+I F
Sbjct: 1 MVCPPLDWV--VQHPEGKEWLNISDLKGGYLNSISGLIHDRYRLLSSGNIKNFFIYFGKF 58
Query: 734 ----------GFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEA 883
+V+N+LQSQ F+IN++ L I+ + G LM L N+ +
Sbjct: 59 EDSLSLKKAADLCEVMNKLQSQGFKINSEFLQLILKYEESFVHTGYLMPSFLTKRNINDV 118
Query: 884 SDLLRECY-AADKGMKSVCNISIILLEFVKCVQ 979
S+L+R Y AA++ ++ + + S ++ FV +Q
Sbjct: 119 SELVRNLYIAAEQKLRHLTDYSSLIQTFVTNIQ 151
>ref|NP_064083.1| orf352 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435105|ref|YP_004222323.1| hypothetical protein
BevumaM_p088 [Beta vulgaris subsp. maritima]
gi|346683197|ref|YP_004842129.1| hypothetical protein
BemaM_p084 [Beta macrocarpa] gi|9087332|dbj|BAA99476.1|
orf352 (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|317905659|emb|CBJ14055.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439838|emb|CBJ17546.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500115|emb|CBX24933.1| hypothetical protein [Beta
macrocarpa] gi|384939139|emb|CBL51986.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 352
Score = 121 bits (304), Expect(2) = 6e-42
Identities = 81/195 (41%), Positives = 110/195 (56%), Gaps = 13/195 (6%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFSNGKAPELS 1155
A YE+ ++ +A AY GY F LPAF+DFRGRIYR+G+LHFHERDLA+ LIL + E
Sbjct: 153 ARYEQTLIEMASAYDGYTFYLPAFLDFRGRIYRSGILHFHERDLARSLILIEDISIYEDY 212
Query: 1156 KEDEMDRRKHLACXXXXXXXXXSTLKDSYDWYMSHYL-------DVQNSDYKLISLAQQA 1314
+ D T ++ +S L + +S+ LI A+ A
Sbjct: 213 NPEFFDHYVRAFKTAAAYHYRSFTSDEAALCRISQLLHDLKGTDPLLSSEGTLIDFAKGA 272
Query: 1315 SDPFQFLARYLSNDRVSDEERIS--GLNRV---PVTQDASASAYQIMSYLLLNVELGIRT 1479
PFQFLA + V ++ S L+++ P+TQDASASAYQI+SY LL+ L RT
Sbjct: 273 KHPFQFLANLRAIVEVDKVQKKSPFTLDQILSSPITQDASASAYQILSYFLLDDTLAKRT 332
Query: 1480 NLLP-SPDDQIQDLY 1521
NL+P DD+IQD+Y
Sbjct: 333 NLIPMDGDDRIQDVY 347
Score = 79.3 bits (194), Expect(2) = 6e-42
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 16/153 (10%)
Frame = +2
Query: 569 MVSKPLAWKSKVYSPS-----TLSDIEGGYLSGLTGDFYNRFRLLTSHNYENFYIKFNHM 733
MV PL W V P +SD++GGYL+ ++G ++R+RLL+S N +NF+I F
Sbjct: 1 MVCPPLDWV--VQHPEGKEWLNISDLKGGYLNSISGLIHDRYRLLSSGNIKNFFIYFGKF 58
Query: 734 ----------GFFKVLNRLQSQVFEINNQVLSYIIDNRDLLEEKGLLMKRLLASVNLQEA 883
+V+N+LQSQ F+IN++ L I+ + G LM L N+ +
Sbjct: 59 EDSLSLKKAADLCEVMNKLQSQGFKINSEFLQLILKYEESFVHTGYLMPSFLTKRNINDV 118
Query: 884 SDLLRECY-AADKGMKSVCNISIILLEFVKCVQ 979
S+L+R Y AA++ ++ + + S ++ FV +Q
Sbjct: 119 SELVRNLYIAAEQKLRHLTDYSSLIQTFVTNIQ 151
>emb|CAQ52970.1| unnamed protein product (mitochondrion) [Lolium perenne]
Length = 1272
Score = 151 bits (382), Expect = 1e-33
Identities = 97/300 (32%), Positives = 157/300 (52%), Gaps = 25/300 (8%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFS------NG 1137
A +E+ + LA++ GYKF LP F+DFRGR YR GV H HERD + L LF+
Sbjct: 666 AMFEQATMELAESLVGYKFYLPLFLDFRGRNYRRGVFHLHERDFMRSLFLFATPNNRIQA 725
Query: 1138 KAPELSKEDEMD-RRKHLACXXXXXXXXXSTLKD---SYDWYMSHY--------LDVQN- 1278
K + +K++E + + L C KD + +W+ + L +N
Sbjct: 726 KMNDFTKKEEEELTQDQLDCFYAATSFHLHKWKDYPSATEWFRTKLEKWDKGKPLSNKNF 785
Query: 1279 -SDYKLISLAQQASDPFQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLL 1455
D ++SL QA PFQFLA + + + +P+TQDASASAYQI+S+ L
Sbjct: 786 TEDTDILSLLNQAKSPFQFLA----GCHAARTKDTYTMKHIPITQDASASAYQILSFFFL 841
Query: 1456 NVELGIRTNLLPSPDDQIQDLYLCLKDELQEF-----LKKRLDSNKYNILESRLTRKLIK 1620
++ +G+ TNL+ S ++I D+Y CL +L+ + ++ +D + NI+ + RK++K
Sbjct: 842 DLRMGMHTNLIGS--NEINDIYDCLLHQLRCYTTTIPIQANVDMHALNIINTVFDRKIMK 899
Query: 1621 GLFMPLIYGKTVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLI 1800
++MP+IYGKT + D ++ G + + ++C +F Y D+ NLM I +
Sbjct: 900 NIYMPIIYGKTKKSTRDDFIKKIGHNRDYATINKLVEICFQFWDHYYKDVNNLMELIQSV 959
>emb|CAQ52964.1| unnamed protein product (mitochondrion) [Lolium perenne]
Length = 1284
Score = 150 bits (379), Expect = 3e-33
Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 25/300 (8%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFS------NG 1137
A +E+ + LA++ GYKF LP F+DFRGR YR GV H HERD + L LF+
Sbjct: 678 AMFEQATMELAESLVGYKFYLPLFLDFRGRNYRRGVFHLHERDFMRSLFLFATPNNRIQA 737
Query: 1138 KAPELSKEDEMD-RRKHLACXXXXXXXXXSTLKD---SYDWYMSHY--------LDVQN- 1278
K + +K++E + + L C D + +W+ + L +N
Sbjct: 738 KMNDFTKKEEEELTQDQLDCFYAATSFHFHKWMDYPSATEWFRTKLEKWDKGKPLSNENF 797
Query: 1279 -SDYKLISLAQQASDPFQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYLLL 1455
D ++SL QA PFQFLA + + + +P+TQDASASAYQI+S+ L
Sbjct: 798 TEDTDILSLLNQAKSPFQFLA----GCHAARTKDTYTMKHIPITQDASASAYQILSFFFL 853
Query: 1456 NVELGIRTNLLPSPDDQIQDLYLCLKDELQEF-----LKKRLDSNKYNILESRLTRKLIK 1620
++ +G+ TNL+ S ++I D+Y CL +L+ + +++ +D + NI+ + RK++K
Sbjct: 854 DLRMGMHTNLIGS--NEINDIYDCLLHQLRCYTTTIPIQENVDMHALNIINTVFDRKIMK 911
Query: 1621 GLFMPLIYGKTVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSINLI 1800
++MP+IYGKT + D ++ G + + ++C +F Y D+ NLM I +
Sbjct: 912 NIYMPIIYGKTKNSTRDDFIKKIGHNRDYATINKLVEICFQFWDHYYKDVNNLMELIQSV 971
>emb|CAQ52967.1| unnamed protein product (mitochondrion) [Lolium perenne]
Length = 1272
Score = 149 bits (376), Expect = 7e-33
Identities = 97/302 (32%), Positives = 158/302 (52%), Gaps = 27/302 (8%)
Frame = +1
Query: 976 AGYEEFVLNLAKAYAGYKFDLPAFMDFRGRIYRAGVLHFHERDLAKCLILFS--NGKAPE 1149
A +E+ + LA++ GYKF LP F+DFRGR YR GV H HERD + L LF+ N +
Sbjct: 666 AMFEQATMELAESLVGYKFYLPLFLDFRGRNYRRGVFHLHERDFMRSLFLFATPNDRIQA 725
Query: 1150 L-----SKEDEMDRRKHLACXXXXXXXXXSTLKD---SYDWY------------MSHYLD 1269
+ KE++ + L C KD + +W+ +S+
Sbjct: 726 IMNDFTKKEEDELTQDQLDCFYAATSFHHHKWKDYPSATEWFRTKLVQWDKGKPLSNENF 785
Query: 1270 VQNSDYKLISLAQQASDPFQFLARYLSNDRVSDEERISGLNRVPVTQDASASAYQIMSYL 1449
+N+D ++SL QA PFQFLA + + + + +P+TQDASASAYQI+S+
Sbjct: 786 TENTD--ILSLLNQAKSPFQFLA----GCQAARTKDTYTMKHIPITQDASASAYQILSFF 839
Query: 1450 LLNVELGIRTNLLPSPDDQIQDLYLCLKDELQEFL-----KKRLDSNKYNILESRLTRKL 1614
L++ +G+ TNL+ S ++I D+Y CL +L+ + ++ +D + NI+ + RK+
Sbjct: 840 FLDLRMGMHTNLIGS--NEINDIYDCLLHQLRYYSTTIPNQENVDKHALNIINTVFDRKI 897
Query: 1615 IKGLFMPLIYGKTVIAMSHDIREEYGSLLRFQDQFYIAQLCHEF*KEKYPDIANLMRSIN 1794
+K ++MP+IYGKT + D ++ G + ++C +F Y D+ NLM I
Sbjct: 898 MKNIYMPIIYGKTKKSTRDDFIKKIGHDRDIATINKLVEICFQFWDHYYNDVNNLMELIQ 957
Query: 1795 LI 1800
+
Sbjct: 958 SV 959