BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00038633
         (1376 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [E...   621   e-175
ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 is...   618   e-174
ref|XP_008789192.1| PREDICTED: replication factor C subunit 3 is...   609   e-171
ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [M...   602   e-169
ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [N...   590   e-166
ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi...   584   e-164
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              583   e-164
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g...   582   e-163
ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [B...   581   e-163
gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii]     579   e-162
ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [V...   577   e-162
ref|XP_004954087.1| PREDICTED: replication factor C subunit 3 [S...   577   e-162
ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [S...   576   e-161
dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa...   575   e-161
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar...   574   e-161
ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-li...   573   e-160
ref|XP_010675030.1| PREDICTED: replication factor C subunit 3 [B...   569   e-159
ref|XP_012446954.1| PREDICTED: replication factor C subunit 5 [G...   568   e-159
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li...   568   e-159
gb|KHN21714.1| Replication factor C subunit 5 [Glycine soja]          567   e-159

>ref|XP_010932468.1| PREDICTED: replication factor C subunit 3 [Elaeis guineensis]
          Length = 356

 Score =  621 bits (1601), Expect = e-175
 Identities = 318/357 (89%), Positives = 335/357 (93%), Gaps = 1/357 (0%)
 Frame = -2

Query: 1285 MTETASAMEIDAALP-SIPNKGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIVDTIDR 1109
            M E  + MEID   P + PNKGK+ +  SD KSAPWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 1    MVEATAPMEIDGDAPLARPNKGKAALG-SDGKSAPWVEKYRPQSLADVAAHRDIVDTIDR 59

Query: 1108 LTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQD 929
            LTNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QYHNMILELNASDDRGIDVVRQQIQD
Sbjct: 60   LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQD 119

Query: 928  FASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 749
            FASARSLSFGAK +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA
Sbjct: 120  FASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 179

Query: 748  LQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTH 569
            LQSRCTRFRFAPLDA+HIRERL+YVI  EGLDVVESGLTALVRLS+GDMRKALNILQSTH
Sbjct: 180  LQSRCTRFRFAPLDASHIRERLEYVIKAEGLDVVESGLTALVRLSNGDMRKALNILQSTH 239

Query: 568  MASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVREV 389
            MASQH+TEEAVYLCTGNPMPKDIEQIA+WLLNES+T SF+YI+D KM+KGLALVDIVREV
Sbjct: 240  MASQHVTEEAVYLCTGNPMPKDIEQIAYWLLNESYTASFRYISDIKMKKGLALVDIVREV 299

Query: 388  TMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAAQ 218
            TMFVFKI+MP DVRVKLINDLADIEYRLSF CNDKLQLGSLISTFT AR ALVAAAQ
Sbjct: 300  TMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGSLISTFTNARSALVAAAQ 356


>ref|XP_008789193.1| PREDICTED: replication factor C subunit 3 isoform X2 [Phoenix
            dactylifera]
          Length = 355

 Score =  618 bits (1593), Expect = e-174
 Identities = 316/356 (88%), Positives = 333/356 (93%)
 Frame = -2

Query: 1285 MTETASAMEIDAALPSIPNKGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIVDTIDRL 1106
            M E  + MEID   P+  NK K+ +A SD KSAPWVEKYRPQSLADVAAHRDIVDTIDRL
Sbjct: 1    MAEATAPMEIDGDAPARSNKDKAPLA-SDGKSAPWVEKYRPQSLADVAAHRDIVDTIDRL 59

Query: 1105 TNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQDF 926
            TNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QY N+ILELNASDDRGIDVVRQQIQDF
Sbjct: 60   TNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNLILELNASDDRGIDVVRQQIQDF 119

Query: 925  ASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPAL 746
            ASARSLSFGAK +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPAL
Sbjct: 120  ASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPAL 179

Query: 745  QSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTHM 566
            QSRCTRFRFAPLDATHIRERL+YVI  EGLDV ESGLTALVRLS+GDMRKALNILQSTHM
Sbjct: 180  QSRCTRFRFAPLDATHIRERLEYVIKAEGLDVAESGLTALVRLSNGDMRKALNILQSTHM 239

Query: 565  ASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVREVT 386
            ASQH+TEE+VYLCTGNPMPKDIEQIA+WLLNESFT SF+YI+D KMRKGLALVDIVREVT
Sbjct: 240  ASQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRYISDIKMRKGLALVDIVREVT 299

Query: 385  MFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAAQ 218
            MFVFKI+MP DVRVKLIN+LADIEYRLSFGCNDKLQLGSLISTFT AR ALVAAAQ
Sbjct: 300  MFVFKIQMPSDVRVKLINNLADIEYRLSFGCNDKLQLGSLISTFTNARSALVAAAQ 355


>ref|XP_008789192.1| PREDICTED: replication factor C subunit 3 isoform X1 [Phoenix
            dactylifera]
          Length = 358

 Score =  609 bits (1570), Expect = e-171
 Identities = 315/359 (87%), Positives = 332/359 (92%), Gaps = 3/359 (0%)
 Frame = -2

Query: 1285 MTETASAMEIDAALPSIPNKGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIVDTIDRL 1106
            M E  + MEID   P+  NK K+ +A SD KSAPWVEKYRPQSLADVAAHRDIVDTIDRL
Sbjct: 1    MAEATAPMEIDGDAPARSNKDKAPLA-SDGKSAPWVEKYRPQSLADVAAHRDIVDTIDRL 59

Query: 1105 TNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQDF 926
            TNENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QY N+ILELNASDDRGIDVVRQQIQDF
Sbjct: 60   TNENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYRNLILELNASDDRGIDVVRQQIQDF 119

Query: 925  ASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPAL 746
            ASARSLSFGAK +VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPAL
Sbjct: 120  ASARSLSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPAL 179

Query: 745  QSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTHM 566
            QSRCTRFRFAPLDATHIRERL+YVI  EGLDV ESGLTALVRLS+GDMRKALNILQSTHM
Sbjct: 180  QSRCTRFRFAPLDATHIRERLEYVIKAEGLDVAESGLTALVRLSNGDMRKALNILQSTHM 239

Query: 565  ASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKY---ITDTKMRKGLALVDIVR 395
            ASQH+TEE+VYLCTGNPMPKDIEQIA+WLLNESFT SF+    I+D KMRKGLALVDIVR
Sbjct: 240  ASQHVTEESVYLCTGNPMPKDIEQIAYWLLNESFTASFRSCLDISDIKMRKGLALVDIVR 299

Query: 394  EVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAAQ 218
            EVTMFVFKI+MP DVRVKLIN+LADIEYRLSFGCNDKLQLGSLISTFT AR ALVAAAQ
Sbjct: 300  EVTMFVFKIQMPSDVRVKLINNLADIEYRLSFGCNDKLQLGSLISTFTNARSALVAAAQ 358


>ref|XP_009409236.1| PREDICTED: replication factor C subunit 3 [Musa acuminata subsp.
            malaccensis]
          Length = 357

 Score =  602 bits (1553), Expect = e-169
 Identities = 306/358 (85%), Positives = 329/358 (91%), Gaps = 2/358 (0%)
 Frame = -2

Query: 1285 MTETASAMEIDAALP--SIPNKGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIVDTID 1112
            M + ++ MEID   P  S+PNKGK +  ASD KS PWVEKYRPQSLADVAAHRDI+DTID
Sbjct: 1    MADASALMEIDEDAPDSSLPNKGK-IALASDPKSVPWVEKYRPQSLADVAAHRDIIDTID 59

Query: 1111 RLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQ 932
            RLT+ENRLPHLLLYGPPGTGKTSTILA+ARKLYG QY NMILELNASDDRGIDVVRQQIQ
Sbjct: 60   RLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGMQYKNMILELNASDDRGIDVVRQQIQ 119

Query: 931  DFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 752
            DFASARSLSFG K  VKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP
Sbjct: 120  DFASARSLSFGPKSTVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 179

Query: 751  ALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQST 572
            ALQSRCTRFRFAPLD+++IRER ++VI  EGLDV ESGLTALVRLSSGDMRKALNILQST
Sbjct: 180  ALQSRCTRFRFAPLDSSNIRERTEHVIKAEGLDVTESGLTALVRLSSGDMRKALNILQST 239

Query: 571  HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVRE 392
            HMAS H+T+EAVYLCTGNPMPKDIEQIA+WLLNESFT +F+YI+D KM+KGLAL+DIVRE
Sbjct: 240  HMASPHVTDEAVYLCTGNPMPKDIEQIAYWLLNESFTAAFRYISDVKMKKGLALIDIVRE 299

Query: 391  VTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAAQ 218
            VTMFVFKIKMP D+RVKLINDLADIEYRL F CNDKLQLGSLISTFT ARCALVAAA+
Sbjct: 300  VTMFVFKIKMPSDIRVKLINDLADIEYRLCFACNDKLQLGSLISTFTNARCALVAAAK 357


>ref|XP_010243510.1| PREDICTED: replication factor C subunit 3 [Nelumbo nucifera]
          Length = 358

 Score =  590 bits (1522), Expect = e-166
 Identities = 302/358 (84%), Positives = 329/358 (91%), Gaps = 2/358 (0%)
 Frame = -2

Query: 1285 MTETASAMEIDAA-LPSIPNKGKSVIAA-SDSKSAPWVEKYRPQSLADVAAHRDIVDTID 1112
            M ETAS MEID A   +  NKGK+VIA  +D K+ PWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 1    MAETASPMEIDGADNRAKSNKGKNVIAVPTDGKATPWVEKYRPQSLADVAAHRDIVDTID 60

Query: 1111 RLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQ 932
            RLTNEN+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q+HNMILELNASDDRGIDVVRQQIQ
Sbjct: 61   RLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGTQFHNMILELNASDDRGIDVVRQQIQ 120

Query: 931  DFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 752
            DFAS +S SFGAK +VKLVLLDEADAMTKDAQFALRRVIEK+TK+TRF LICNHVNKIIP
Sbjct: 121  DFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLICNHVNKIIP 180

Query: 751  ALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQST 572
            ALQSRCTRFRFAPLDA+H+ +RL+YVI  EGLDV E GL ALVRLSSGDMRKALNILQST
Sbjct: 181  ALQSRCTRFRFAPLDASHVMDRLKYVIEAEGLDVSEGGLAALVRLSSGDMRKALNILQST 240

Query: 571  HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVRE 392
            HMASQHITEEAVYLCTGNPMPKDIEQI+FWLLNESF  S++ I++ KM+KGLALVDIVRE
Sbjct: 241  HMASQHITEEAVYLCTGNPMPKDIEQISFWLLNESFATSYRCISEMKMKKGLALVDIVRE 300

Query: 391  VTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAAQ 218
            VTMF+FKIKMP DVRV+LINDLADIEYRLSFGCNDKLQLGSLI++FT AR ALVAAA+
Sbjct: 301  VTMFIFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVAAAK 358


>ref|NP_001136580.1| replication factor C subunit 3 [Zea mays] gi|194696262|gb|ACF82215.1|
            unknown [Zea mays] gi|413939151|gb|AFW73702.1|
            replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  584 bits (1506), Expect = e-164
 Identities = 301/361 (83%), Positives = 327/361 (90%), Gaps = 5/361 (1%)
 Frame = -2

Query: 1288 AMTETASAMEIDAALPSIPN-----KGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIV 1124
            A T  A+ M+IDAA P  P      KGK+ ++A   ++APWVEKYRPQSLADVAAHRDIV
Sbjct: 2    AGTAAAALMDIDAAAPPPPPPGAAAKGKAPLSAG-GRAAPWVEKYRPQSLADVAAHRDIV 60

Query: 1123 DTIDRLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVR 944
            DTIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGIDVVR
Sbjct: 61   DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVR 120

Query: 943  QQIQDFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVN 764
            QQIQDFA ARSLSFGA+ +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVN
Sbjct: 121  QQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVN 180

Query: 763  KIIPALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNI 584
            KIIPALQSRCTRFRFAPLD +H+RERLQ++I +EGL V + GLTALVRLS+GDMRKALNI
Sbjct: 181  KIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNI 240

Query: 583  LQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVD 404
            LQSTHMASQ ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFKYI+D KMRKGLALVD
Sbjct: 241  LQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVD 300

Query: 403  IVREVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAA 224
            I+REVTMFVFKI+MP DVRVKLINDLADIEYRLSF CNDKLQLG+LISTFT  R A+VAA
Sbjct: 301  IIREVTMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAA 360

Query: 223  A 221
            A
Sbjct: 361  A 361


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  583 bits (1504), Expect = e-164
 Identities = 300/361 (83%), Positives = 328/361 (90%), Gaps = 5/361 (1%)
 Frame = -2

Query: 1288 AMTETASAMEIDAALPSIPN-----KGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIV 1124
            A T  A+ M+IDAA P  P      KGK++++A   ++APWVEKYRPQSLADVAAHRDIV
Sbjct: 2    AGTAAAAPMDIDAAAPPPPPPGAAAKGKALLSAG-GRAAPWVEKYRPQSLADVAAHRDIV 60

Query: 1123 DTIDRLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVR 944
            DTIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGIDVVR
Sbjct: 61   DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVR 120

Query: 943  QQIQDFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVN 764
            QQIQDFA ARSLSFGA+ +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVN
Sbjct: 121  QQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVN 180

Query: 763  KIIPALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNI 584
            KIIPALQSRCTRFRFAPLD +H+RERLQ++I +EGL V + GLTALVRLS+GDMRKALNI
Sbjct: 181  KIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNI 240

Query: 583  LQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVD 404
            LQSTHMASQ ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFKYI+D KMRKGLALVD
Sbjct: 241  LQSTHMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVD 300

Query: 403  IVREVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAA 224
            I+REVTMFVFKI+MP DVRVKLIN+LADIEYRLSF CNDKLQLG+LISTFT  R A+VAA
Sbjct: 301  IIREVTMFVFKIQMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAA 360

Query: 223  A 221
            A
Sbjct: 361  A 361


>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
            gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
            Full=Replication factor C subunit 3; Short=OsRFC3;
            AltName: Full=Activator 1 subunit 3
            gi|46805779|dbj|BAD17147.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|46806135|dbj|BAD17365.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
            Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218191668|gb|EEC74095.1| hypothetical protein
            OsI_09136 [Oryza sativa Indica Group]
          Length = 361

 Score =  582 bits (1500), Expect = e-163
 Identities = 297/354 (83%), Positives = 327/354 (92%), Gaps = 3/354 (0%)
 Frame = -2

Query: 1273 ASAMEIDAALP--SIPNKGKSVIAASDS-KSAPWVEKYRPQSLADVAAHRDIVDTIDRLT 1103
            A+ M+IDAA P      KGK+ ++++   ++APWVEKYRPQSL DVAAHRDIVDTIDRLT
Sbjct: 7    ATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLT 66

Query: 1102 NENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQDFA 923
            NENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGIDVVRQQIQDFA
Sbjct: 67   NENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFA 126

Query: 922  SARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQ 743
            SARSLSFGAK +VK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKIIPALQ
Sbjct: 127  SARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQ 186

Query: 742  SRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTHMA 563
            SRCTRFRFAPLD TH+RERL+++I +EGLDV + GLTALVRLS+GDMRKALNILQSTHMA
Sbjct: 187  SRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMA 246

Query: 562  SQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVREVTM 383
            S+ ITEEAVYLCTGNPMPKDIEQIA+WLLNESF+ SFK I+D KMRKGLALVDI+REVTM
Sbjct: 247  SKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIREVTM 306

Query: 382  FVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            FVFKI+MP DVR+KLINDLADIEYRLSF CNDKLQLG+LISTFT AR A+VAAA
Sbjct: 307  FVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360


>ref|XP_003570529.1| PREDICTED: replication factor C subunit 3 [Brachypodium distachyon]
          Length = 358

 Score =  581 bits (1498), Expect = e-163
 Identities = 298/353 (84%), Positives = 328/353 (92%), Gaps = 1/353 (0%)
 Frame = -2

Query: 1276 TASAMEIDAALPSIPNKGKSVIAASDS-KSAPWVEKYRPQSLADVAAHRDIVDTIDRLTN 1100
            T + M+IDAA P   +KGK+ ++A+ + +S+PWVEKYRPQSLADVAAHRDIVDTIDRLT+
Sbjct: 6    TTAPMDIDAAAPP-HSKGKAPLSAAAAVRSSPWVEKYRPQSLADVAAHRDIVDTIDRLTD 64

Query: 1099 ENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQDFAS 920
            ENRLPHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQIQDFAS
Sbjct: 65   ENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQDFAS 124

Query: 919  ARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQS 740
            A SLSFGAK AVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQS
Sbjct: 125  AHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQS 184

Query: 739  RCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTHMAS 560
            RCTRFRFAPLD +H+ ERLQ++I +EGLDV E GLTALVRLSSGDMRKALNILQSTHMAS
Sbjct: 185  RCTRFRFAPLDGSHVSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQSTHMAS 244

Query: 559  QHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVREVTMF 380
            Q ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFKYI+D KMRKGLAL+DI+REVTMF
Sbjct: 245  QQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALIDIIREVTMF 304

Query: 379  VFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            VFKIKMP +VRVKLINDLADIEYRL+F CNDKLQLG+LISTFT+AR A+VAAA
Sbjct: 305  VFKIKMPCNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTSARTAMVAAA 357


>gb|EMT26703.1| Replication factor C subunit 5 [Aegilops tauschii]
          Length = 359

 Score =  579 bits (1492), Expect = e-162
 Identities = 298/357 (83%), Positives = 326/357 (91%), Gaps = 1/357 (0%)
 Frame = -2

Query: 1288 AMTETASAMEIDAALPSIPNKGKSVIAASDS-KSAPWVEKYRPQSLADVAAHRDIVDTID 1112
            A T  A+ M+IDAA      KGK+ ++A+ + KS+PWVEKYRPQSLADVAAHRDIVDTID
Sbjct: 2    AGTTAAAPMDIDAAAVRPATKGKATLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTID 61

Query: 1111 RLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQ 932
            RLT+ENRLPHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQIQ
Sbjct: 62   RLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQ 121

Query: 931  DFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 752
            DFASA SLSFGAK AVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIP
Sbjct: 122  DFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIP 181

Query: 751  ALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQST 572
            ALQSRCTRFRFAPLD T++ ERLQ+VI +EGLDV + GLTALVRLS+GDMRKALNILQST
Sbjct: 182  ALQSRCTRFRFAPLDGTNVSERLQHVIKSEGLDVDKGGLTALVRLSNGDMRKALNILQST 241

Query: 571  HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVRE 392
            HMAS  ITEEAVYLCTGNPMPKDIEQIA WLLNE F+ SFKYI+DTKMRKGLAL+DI+RE
Sbjct: 242  HMASSQITEEAVYLCTGNPMPKDIEQIASWLLNEPFSTSFKYISDTKMRKGLALIDIIRE 301

Query: 391  VTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            VTMFVFKI MP +VRVKLINDLADIEYRL+F CNDKLQLG+LISTFTTAR A+VAAA
Sbjct: 302  VTMFVFKINMPSNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTTARTAMVAAA 358


>ref|XP_002285868.1| PREDICTED: replication factor C subunit 3 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  577 bits (1488), Expect = e-162
 Identities = 297/360 (82%), Positives = 322/360 (89%), Gaps = 4/360 (1%)
 Frame = -2

Query: 1285 MTETASAMEIDAALPSI--PNKGKSVIAAS--DSKSAPWVEKYRPQSLADVAAHRDIVDT 1118
            M E  + M+ID     +   NKGKSV+     D K+ PWVEKYRPQSLADVAAHRDIVDT
Sbjct: 1    MAEAVTVMDIDEEDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVDT 60

Query: 1117 IDRLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQ 938
            IDRLT+ENRLPHLLLYGPPGTGKTSTILA+ARKLYG Q+HNMILELNASDDRGIDVVRQQ
Sbjct: 61   IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQ 120

Query: 937  IQDFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKI 758
            IQDFAS +S SFGAK +VKLVLLDEADAMTKDAQFALRRVIEK+TK+TRFALICNHVNKI
Sbjct: 121  IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 180

Query: 757  IPALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQ 578
            IPALQSRCTRFRFAPLDA H+ ERL++VIN E LDV ESGL ALVRLSSGDMRKALNILQ
Sbjct: 181  IPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQ 240

Query: 577  STHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIV 398
            STHMASQ ITEEAVYLCTGNP+PKDIEQI++WLLNESF  SF  I++ KMRKGLALVD+V
Sbjct: 241  STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVV 300

Query: 397  REVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAAQ 218
            REVTMFVFKIKMP DVRV+LINDLADIEYRLSFGCNDKLQLGSLI++FT AR ALVAAA+
Sbjct: 301  REVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAAAK 360


>ref|XP_004954087.1| PREDICTED: replication factor C subunit 3 [Setaria italica]
          Length = 361

 Score =  577 bits (1487), Expect = e-162
 Identities = 296/356 (83%), Positives = 325/356 (91%), Gaps = 5/356 (1%)
 Frame = -2

Query: 1273 ASAMEIDAALPSIPN-----KGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIVDTIDR 1109
            A+ M++DAA P  P      KGK+ + A   ++APWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 7    ATPMDVDAAAPPPPPAGAAAKGKAPLNAP-GRAAPWVEKYRPQSLADVAAHRDIVDTIDR 65

Query: 1108 LTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQD 929
            LTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGIDVVR QIQD
Sbjct: 66   LTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRLQIQD 125

Query: 928  FASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPA 749
            FA ARSLSFGA+ +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPA
Sbjct: 126  FAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPA 185

Query: 748  LQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTH 569
            LQSRCTRFRFAPLD +H+RERLQ++I +EGL V E GLTALVRLS+GDMRKALNILQSTH
Sbjct: 186  LQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNILQSTH 245

Query: 568  MASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVREV 389
            MASQ ITEEAVYLCTGNPMPKDIE+IAFWLLNE F+ SFK+I+D KMRKGLALVDI+REV
Sbjct: 246  MASQQITEEAVYLCTGNPMPKDIEEIAFWLLNEPFSTSFKHISDMKMRKGLALVDIIREV 305

Query: 388  TMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            TMFVFKI+MP DVRVKLINDLADIEYRLSF CNDKLQLG+LISTFT+AR A+VAA+
Sbjct: 306  TMFVFKIQMPSDVRVKLINDLADIEYRLSFACNDKLQLGALISTFTSARTAMVAAS 361


>ref|XP_002454641.1| hypothetical protein SORBIDRAFT_04g034710 [Sorghum bicolor]
            gi|241934472|gb|EES07617.1| hypothetical protein
            SORBIDRAFT_04g034710 [Sorghum bicolor]
          Length = 362

 Score =  576 bits (1485), Expect = e-161
 Identities = 297/361 (82%), Positives = 325/361 (90%), Gaps = 5/361 (1%)
 Frame = -2

Query: 1288 AMTETASAMEIDAALPSIPN-----KGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIV 1124
            A T  A+ M+IDAA P  P      KGK+ ++A   ++APWVEKYRPQSLADVAAHRDIV
Sbjct: 2    AGTAAAAPMDIDAAAPPPPPPGAAAKGKAPLSAG-GRAAPWVEKYRPQSLADVAAHRDIV 60

Query: 1123 DTIDRLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVR 944
            DTIDRLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGIDVVR
Sbjct: 61   DTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVR 120

Query: 943  QQIQDFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVN 764
            QQIQDFA ARSLSFGA+ +VKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVN
Sbjct: 121  QQIQDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVN 180

Query: 763  KIIPALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNI 584
            KIIPALQSRCTRFRFAPLD +H+RERLQ++I +EGL V E GLTALVRLS+GDMRKALNI
Sbjct: 181  KIIPALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDEGGLTALVRLSNGDMRKALNI 240

Query: 583  LQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVD 404
            LQSTHMASQ ITEEAVYLCTGNPMP DIE+IAFWLLNE F+ SFK+I+D KMRKGLALVD
Sbjct: 241  LQSTHMASQQITEEAVYLCTGNPMPNDIERIAFWLLNEPFSTSFKHISDMKMRKGLALVD 300

Query: 403  IVREVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAA 224
            I+REVTMFVFKI+MP DVRVKLIN+LADIEYRLSF CNDKLQLG+LIS FT  R A+VAA
Sbjct: 301  IIREVTMFVFKIEMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISAFTDTRTAMVAA 360

Query: 223  A 221
            A
Sbjct: 361  A 361


>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
          Length = 367

 Score =  575 bits (1483), Expect = e-161
 Identities = 297/360 (82%), Positives = 327/360 (90%), Gaps = 9/360 (2%)
 Frame = -2

Query: 1273 ASAMEIDAALP--SIPNKGKSVIAASDS-KSAPWVEKYRPQSLADVAAHRDIVDTIDRLT 1103
            A+ M+IDAA P      KGK+ ++++   ++APWVEKYRPQSL DVAAHRDIVDTIDRLT
Sbjct: 7    ATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLT 66

Query: 1102 NENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQDFA 923
            NENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGIDVVRQQIQDFA
Sbjct: 67   NENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQDFA 126

Query: 922  SARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQ 743
            SARSLSFGAK +VK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKIIPALQ
Sbjct: 127  SARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQ 186

Query: 742  SRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTHMA 563
            SRCTRFRFAPLD TH+RERL+++I +EGLDV + GLTALVRLS+GDMRKALNILQSTHMA
Sbjct: 187  SRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMA 246

Query: 562  SQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFK------YITDTKMRKGLALVDI 401
            S+ ITEEAVYLCTGNPMPKDIEQIA+WLLNESF+ SFK       I+D KMRKGLALVDI
Sbjct: 247  SKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCILNYQSISDMKMRKGLALVDI 306

Query: 400  VREVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            +REVTMFVFKI+MP DVR+KLINDLADIEYRLSF CNDKLQLG+LISTFT AR A+VAAA
Sbjct: 307  IREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 366


>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 359

 Score =  574 bits (1479), Expect = e-161
 Identities = 293/352 (83%), Positives = 323/352 (91%), Gaps = 1/352 (0%)
 Frame = -2

Query: 1273 ASAMEIDAALPSIPNKGKSVIAASDS-KSAPWVEKYRPQSLADVAAHRDIVDTIDRLTNE 1097
            A+ M+ID A      KGK+ ++A+ + KS+PWVEKYRPQSLADVAAHRDIVDTIDRLT+E
Sbjct: 7    AAPMDIDGAAAPPAFKGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTIDRLTDE 66

Query: 1096 NRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQDFASA 917
            NRLPHLLLYGPPGTGKTSTILA+ARK+YGSQY NMILELNASD+RGI VVRQQIQDFASA
Sbjct: 67   NRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQDFASA 126

Query: 916  RSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSR 737
             SLSFGAK AVKLVLLDEADAMTKDAQFALRRVIEK+T+STRFALICNHVNKIIPALQSR
Sbjct: 127  HSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPALQSR 186

Query: 736  CTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTHMASQ 557
            CTRFRFAPLD +H+ ERL+++I +EGLDV E GL+ALVRLS+GDMRK+LNILQSTHMASQ
Sbjct: 187  CTRFRFAPLDGSHVSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQSTHMASQ 246

Query: 556  HITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVREVTMFV 377
             ITEEAVYLCTGNPMPKDIEQIAFWLLNE F+ SFK+I D KMRKGLAL+DI+REVTMFV
Sbjct: 247  QITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDIIREVTMFV 306

Query: 376  FKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            FKIKMP  VRVKLINDLADIEYRL+F CNDKLQLG+LISTFTTAR A+VAAA
Sbjct: 307  FKIKMPSSVRVKLINDLADIEYRLTFACNDKLQLGALISTFTTARTAMVAAA 358


>ref|XP_006647989.1| PREDICTED: replication factor C subunit 3-like [Oryza brachyantha]
          Length = 362

 Score =  573 bits (1477), Expect = e-160
 Identities = 295/357 (82%), Positives = 320/357 (89%), Gaps = 3/357 (0%)
 Frame = -2

Query: 1282 TETASAMEIDAALPSIPNKGKSVIAASDS---KSAPWVEKYRPQSLADVAAHRDIVDTID 1112
            T  A+ M+IDAA P      K     S +   ++APWVEKYRPQSL DVAAHRDIVDTID
Sbjct: 5    TTAATPMDIDAAAPPPGAYAKDKAPLSTTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTID 64

Query: 1111 RLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQ 932
            RLTNENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASD+RGIDVVRQQIQ
Sbjct: 65   RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQ 124

Query: 931  DFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIP 752
            DFASARSLSFGAK +VK+VLLDEADAMTKDAQFALRRVIEKHT+STRFALICNHVNKIIP
Sbjct: 125  DFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIP 184

Query: 751  ALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQST 572
            ALQSRCTRFRFAPLD TH+R+RLQ++I +EGLDV + GLTALVRLS+GDMRKALNILQST
Sbjct: 185  ALQSRCTRFRFAPLDGTHVRDRLQHIILSEGLDVDDGGLTALVRLSNGDMRKALNILQST 244

Query: 571  HMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVRE 392
            HMAS+ ITEEAVYLCTGNPM KDIEQIAFWLLNE F+ SFK I+D KMRKGLALVDI+RE
Sbjct: 245  HMASKQITEEAVYLCTGNPMQKDIEQIAFWLLNEPFSTSFKCISDMKMRKGLALVDIIRE 304

Query: 391  VTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            VTMFVFKI+MP DVR+KLINDLADIEYRL F CNDKLQLG+LISTFT AR A+VAAA
Sbjct: 305  VTMFVFKIQMPSDVRIKLINDLADIEYRLCFACNDKLQLGALISTFTGARSAMVAAA 361


>ref|XP_010675030.1| PREDICTED: replication factor C subunit 3 [Beta vulgaris subsp.
            vulgaris] gi|870868912|gb|KMT19698.1| hypothetical
            protein BVRB_1g007540 [Beta vulgaris subsp. vulgaris]
          Length = 363

 Score =  569 bits (1467), Expect = e-159
 Identities = 287/362 (79%), Positives = 325/362 (89%), Gaps = 7/362 (1%)
 Frame = -2

Query: 1285 MTETASAMEIDAA----LPSI---PNKGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDI 1127
            M ET S M++D A    +PS    PNKGK+V+   D KS  WVEKYRPQSLADVAAHRDI
Sbjct: 1    MAETISLMDVDEADNDNVPSPIIKPNKGKNVVVPGDGKSGLWVEKYRPQSLADVAAHRDI 60

Query: 1126 VDTIDRLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVV 947
            +DTIDRLT+EN+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q+HNMILELNASD+RGIDVV
Sbjct: 61   IDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGNQFHNMILELNASDERGIDVV 120

Query: 946  RQQIQDFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHV 767
            RQQIQDFAS +S SFGAK  VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFALICN+V
Sbjct: 121  RQQIQDFASTQSFSFGAKAHVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNNV 180

Query: 766  NKIIPALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALN 587
            NK+IPALQSRCTRFRFAPLD+TH+ ERL++VI  EG+DV ESGL A+VRLS+GDMRKALN
Sbjct: 181  NKVIPALQSRCTRFRFAPLDSTHVTERLKHVIEGEGIDVTESGLAAIVRLSTGDMRKALN 240

Query: 586  ILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALV 407
            ILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI++WLLNE+F  S+  ++D K RKGLALV
Sbjct: 241  ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNETFVTSYSQVSDMKTRKGLALV 300

Query: 406  DIVREVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVA 227
            DI+REVTMFVF+I+MP DVRV+LIND+ADIEYRLSFGC+DKLQLGSLI++FT AR ALVA
Sbjct: 301  DIIREVTMFVFRIRMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLIASFTKARSALVA 360

Query: 226  AA 221
            AA
Sbjct: 361  AA 362


>ref|XP_012446954.1| PREDICTED: replication factor C subunit 5 [Gossypium raimondii]
            gi|763792295|gb|KJB59291.1| hypothetical protein
            B456_009G247600 [Gossypium raimondii]
          Length = 363

 Score =  568 bits (1465), Expect = e-159
 Identities = 284/338 (84%), Positives = 312/338 (92%)
 Frame = -2

Query: 1231 NKGKSVIAASDSKSAPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTG 1052
            NKGK ++ A+D+K  PWVEKYRPQSLADVAAHRDIVDTIDRLT+ENRLPHLLLYGPPGTG
Sbjct: 26   NKGKGLVTAADTKPTPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTG 85

Query: 1051 KTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQQIQDFASARSLSFGAKFAVKLVL 872
            KTSTILA+ARKLYGSQY NMILELNASDDRGIDVVRQQIQDFAS +S SFGAK +VKL+L
Sbjct: 86   KTSTILAVARKLYGSQYRNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKSSVKLIL 145

Query: 871  LDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDATHIR 692
            LDEADAMTKDAQFALRRVIEK+TK+TRFALICNHVNKIIPALQSRCTRFRFAPLD  H+ 
Sbjct: 146  LDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPIHVT 205

Query: 691  ERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNILQSTHMASQHITEEAVYLCTGNPM 512
            ERL++VI  E LDV + GL ALVRLS+GDMRKALNILQSTHMASQ ITEEAVYLCTGNP+
Sbjct: 206  ERLKHVIQAERLDVPDCGLAALVRLSNGDMRKALNILQSTHMASQKITEEAVYLCTGNPL 265

Query: 511  PKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDIVREVTMFVFKIKMPPDVRVKLIN 332
            PKDIEQI++WLLNESF +SFK +++TK RKGLAL+DIVREVTMFVFKIKMP DVRV+LIN
Sbjct: 266  PKDIEQISYWLLNESFAESFKRVSETKTRKGLALIDIVREVTMFVFKIKMPSDVRVQLIN 325

Query: 331  DLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAAQ 218
            DLADIEYRLSFGCNDKLQLGSLI+ FT AR +LVAA +
Sbjct: 326  DLADIEYRLSFGCNDKLQLGSLIAIFTKARSSLVAAVK 363


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
          Length = 364

 Score =  568 bits (1465), Expect = e-159
 Identities = 293/363 (80%), Positives = 321/363 (88%), Gaps = 6/363 (1%)
 Frame = -2

Query: 1288 AMTETASAMEIDAALPSI---PNKGKSVIAAS---DSKSAPWVEKYRPQSLADVAAHRDI 1127
            A  ET S M+ID          + GK+VI +    D K++PWVEKYRPQSLADVAAHRDI
Sbjct: 2    AEAETVSLMDIDEDENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDI 61

Query: 1126 VDTIDRLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVV 947
            VDTIDRLT+ENRLPHLLLYGPPGTGKTSTILA+ARKLYG+QYHNMILELNASDDRGIDVV
Sbjct: 62   VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 121

Query: 946  RQQIQDFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHV 767
            RQQIQDFAS +S SFG K +VKLVLLDEADAMTKDAQFALRRVIEK+TK+TRFALICN V
Sbjct: 122  RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQV 181

Query: 766  NKIIPALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALN 587
            NKIIPALQSRCTRFRFAPL+  H+ ERL++VI  EGLDV E GL ALVRL +GDMRKALN
Sbjct: 182  NKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALN 241

Query: 586  ILQSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALV 407
            ILQSTHMASQ ITEEAVYLCTGNP+PKDIEQI++WLLNESF DSFK I++ KMRKGLALV
Sbjct: 242  ILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALV 301

Query: 406  DIVREVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVA 227
            DIVREVTMFVFKIKMP DVRV+L+NDLADIEYRLSFGCNDKLQLGS+ISTFT AR A+VA
Sbjct: 302  DIVREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVA 361

Query: 226  AAQ 218
            AA+
Sbjct: 362  AAK 364


>gb|KHN21714.1| Replication factor C subunit 5 [Glycine soja]
          Length = 361

 Score =  567 bits (1461), Expect = e-159
 Identities = 292/360 (81%), Positives = 318/360 (88%), Gaps = 5/360 (1%)
 Frame = -2

Query: 1285 MTETASAMEIDA-ALPSIPNKGKSVIAASD----SKSAPWVEKYRPQSLADVAAHRDIVD 1121
            M +T   M+ID     + P+KGKSV+ A +     K+ PWVEKYRPQSL DVAAHRDIVD
Sbjct: 1    MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60

Query: 1120 TIDRLTNENRLPHLLLYGPPGTGKTSTILAMARKLYGSQYHNMILELNASDDRGIDVVRQ 941
            TIDRLT ENRLPHLLLYGPPGTGKTSTILA+ARKLYGSQY NMILELNASDDRGIDVVRQ
Sbjct: 61   TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQ 120

Query: 940  QIQDFASARSLSFGAKFAVKLVLLDEADAMTKDAQFALRRVIEKHTKSTRFALICNHVNK 761
            QIQDFAS +SLSFG K +VKLVLLDEADAMTKDAQFALRRVIEK+TKSTRFALICNHVNK
Sbjct: 121  QIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 180

Query: 760  IIPALQSRCTRFRFAPLDATHIRERLQYVINTEGLDVVESGLTALVRLSSGDMRKALNIL 581
            IIPALQSRCTRFRFAPLDA H+ ERL++VI  EGLDV +SGL A VRLS+GDMRKALNIL
Sbjct: 181  IIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNIL 240

Query: 580  QSTHMASQHITEEAVYLCTGNPMPKDIEQIAFWLLNESFTDSFKYITDTKMRKGLALVDI 401
            QSTHMASQ ITEEAVYLCTGNP+PKDIEQI++WLLNE F DSFK I + K RKGLAL+DI
Sbjct: 241  QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALIDI 300

Query: 400  VREVTMFVFKIKMPPDVRVKLINDLADIEYRLSFGCNDKLQLGSLISTFTTARCALVAAA 221
            VREVTMFVFKIKMP  VRV+L+NDLADIEYRLSFGCNDKLQLGS+I++FT AR ALVAAA
Sbjct: 301  VREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 360