BLASTX nr result

ID: Anemarrhena21_contig00037211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00037211
         (295 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008221996.1| PREDICTED: putative ribonuclease H protein A...    59   2e-06
ref|XP_004288816.1| PREDICTED: uncharacterized protein LOC101301...    58   2e-06
ref|XP_008221358.1| PREDICTED: putative ribonuclease H protein A...    57   4e-06
ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936...    57   6e-06

>ref|XP_008221996.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 545

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +3

Query: 3   LMMHGRLLTRALLQRRGIVASSICHIC-YQEENEDHVFRFCHNAKEIWSSANHDPGEEWG 179
           L+ H +LLT    Q+RG+ + + C  C Y  E  +H+   C  + +IWS    +  +EW 
Sbjct: 232 LLCHKKLLTNFQRQKRGLASCAACPRCSYPVETIEHLVSGCCCSMDIWSGFGLN--DEWA 289

Query: 180 ALN---LKLWIKRNVETKRNRYVTSGWVNFFLTCLWFIWK 290
             +     +W+  N+++KR       W   F  CLWFIWK
Sbjct: 290 HCHDGDFDVWLLHNLQSKRVGCDKLSWPLVFAVCLWFIWK 329


>ref|XP_004288816.1| PREDICTED: uncharacterized protein LOC101301910 [Fragaria vesca
           subsp. vesca]
          Length = 252

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   LMMHGRLLTRALLQRRGIVASSICHICYQE-ENEDHVFRFCHNAKEIWSSANHDPGEEWG 179
           L++ GRL TR  L R G++  + C +C ++ E  DH+F +C+ A  +W++A   P  +W 
Sbjct: 7   LLLRGRLKTRDRLSRFGLIQDNSCVLCNEDNETMDHLFGYCNFATSVWNAAAMTPPIDWK 66

Query: 180 ALNLKLWIKRNVETKRNRYVTSGWVNFFLTCLWFIWK 290
              +K+  K  ++   N Y ++ +  F +TC W IWK
Sbjct: 67  EGLIKVARKWFID---NHYDSNLFGKFIVTC-WQIWK 99


>ref|XP_008221358.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 877

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   LMMHGRLLTRALLQRRGIVASSICHIC-YQEENEDHVFRFCHNAKEIWSSANHDPGEEWG 179
           ++ H +LLT    Q+RG+     C  C Y  +   H+F+ C  +  IW+           
Sbjct: 565 IVCHQKLLTNVQRQKRGLTQVPTCPKCDYPMKAIAHLFKDCPFSLAIWNYLQIGDNSSLD 624

Query: 180 ALNLKLWIKRNVETKRNRYVTSGWVNFFLTCLWFIWK 290
            ++ K W+ RN+++KR  Y    W   F   LWFIWK
Sbjct: 625 LMDFKEWLLRNLQSKRKVYNGLPWPLVFALYLWFIWK 661


>ref|XP_009344908.1| PREDICTED: uncharacterized protein LOC103936764 [Pyrus x
            bretschneideri]
          Length = 1365

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
 Frame = +3

Query: 12   HGRLLTRALLQRRGIVASSICHICYQ-EENEDHVFRFCHNAKEIWSSANHDPGEEWG-AL 185
            HG++LT     RRG   +  C IC   EE+ DH+FR C  +   W+     P      AL
Sbjct: 1055 HGKILTNVQRARRGFTNNPCCPICPNIEESMDHIFRSCKQSPFFWNGVGIPPEVAHSFAL 1114

Query: 186  NLKLWIKRNVETKRNRYVTSGWVNFFLTCLWFIWK 290
            + + W+  N+ T+ +      W   F + LW+ WK
Sbjct: 1115 DFQSWMAINLRTQCSTIHGLPWNLIFASTLWYCWK 1149


Top