BLASTX nr result
ID: Anemarrhena21_contig00028324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00028324
(470 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 312 6e-83
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 294 1e-77
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 197 2e-48
ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038... 195 9e-48
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 193 3e-47
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 192 1e-46
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 191 2e-46
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 190 3e-46
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 189 6e-46
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 188 1e-45
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 188 1e-45
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 187 2e-45
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 186 4e-45
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 186 5e-45
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 186 5e-45
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 186 5e-45
ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group] g... 186 7e-45
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 183 4e-44
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 181 1e-43
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 181 1e-43
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 312 bits (799), Expect = 6e-83
Identities = 152/156 (97%), Positives = 153/156 (98%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVD+RRSMTGYVFTLGGSVVSWKATLQP
Sbjct: 1136 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQP 1195
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQA VYCDSLSAICLAKDQVHHERT
Sbjct: 1196 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSAICLAKDQVHHERT 1255
Query: 110 KHIDVRYHFLRSEKRIKVNKVGTADNPADMFTKSVP 3
KHIDVRYHFLRSEKRIKV KVGTADNPADMFTK VP
Sbjct: 1256 KHIDVRYHFLRSEKRIKVKKVGTADNPADMFTKPVP 1291
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 294 bits (753), Expect = 1e-77
Identities = 141/156 (90%), Positives = 150/156 (96%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGT+DVGLIYG DT+CLVTGYSDSDYAGD+D+RRSMTGYV+TLGGSVVSWKATLQ
Sbjct: 1249 FRYLRGTADVGLIYGNDTECLVTGYSDSDYAGDIDTRRSMTGYVYTLGGSVVSWKATLQS 1308
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
+VTLSTTEAEYMALT AAKEGIWL+GLVSDLGLHHD+AIVYCDSLSAICLAKDQVHH+RT
Sbjct: 1309 SVTLSTTEAEYMALTAAAKEGIWLRGLVSDLGLHHDRAIVYCDSLSAICLAKDQVHHDRT 1368
Query: 110 KHIDVRYHFLRSEKRIKVNKVGTADNPADMFTKSVP 3
KHIDVRYHFLRSEKRI V KVGTADNPADMFTK VP
Sbjct: 1369 KHIDVRYHFLRSEKRIVVKKVGTADNPADMFTKPVP 1404
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 197 bits (502), Expect = 2e-48
Identities = 93/158 (58%), Positives = 120/158 (75%), Gaps = 3/158 (1%)
Frame = -1
Query: 467 RYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQPT 288
RY+RG+ D+ L++ + + VTGY DSDYA D+D RRS++GYVFT+GG+ VSWKA LQ
Sbjct: 413 RYMRGSQDLNLVFTKEKEFRVTGYCDSDYAADLDRRRSVSGYVFTVGGNTVSWKANLQSV 472
Query: 287 VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERTK 108
LSTTEAE+MALTEAAKE +W+KGL+ DLGL D+ ++CDS SAICL+K+ HHERTK
Sbjct: 473 TALSTTEAEFMALTEAAKEALWIKGLMKDLGLEQDKVTLWCDSQSAICLSKNSTHHERTK 532
Query: 107 HIDVRYHFLRSEKR---IKVNKVGTADNPADMFTKSVP 3
HIDVRY+F+R + V K+ T+ NPAD TKS+P
Sbjct: 533 HIDVRYNFIRDVVEAGDVDVLKIHTSRNPADALTKSIP 570
>ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038071 [Elaeis guineensis]
Length = 397
Score = 195 bits (496), Expect = 9e-48
Identities = 96/157 (61%), Positives = 119/157 (75%), Gaps = 3/157 (1%)
Frame = -1
Query: 467 RYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQPT 288
RY++GTS +GLI+ + C+VTG+ DSDYA D+D RRS+TGYVFTL G VSWKATLQ
Sbjct: 224 RYIKGTSKLGLIFTAQSNCIVTGFCDSDYACDLDRRRSLTGYVFTLSGCAVSWKATLQSI 283
Query: 287 VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERTK 108
LSTTEAEYMALTEA KE IWLKGLV DL L D ++CDS SA+ LA+DQ++HERTK
Sbjct: 284 FALSTTEAEYMALTEAEKEAIWLKGLVQDLDLEQDCLDIHCDSQSALHLARDQMYHERTK 343
Query: 107 HIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSV 6
+DVRYHF+R + +++ K+ TA N ADMFTK +
Sbjct: 344 QVDVRYHFIRDLVEKGDVRLQKIYTAYNLADMFTKPI 380
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 193 bits (491), Expect = 3e-47
Identities = 100/159 (62%), Positives = 118/159 (74%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYL GTS L +G LV GY DSD+AGD+D RRS+TGYVFT+GG VSWKA+LQ
Sbjct: 1009 FRYLHGTSSACLQFGRSRDGLV-GYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQA 1067
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TV LSTTEAEYMA++EA KE IWL+GL ++L ++CDS SAICL KDQ+ HERT
Sbjct: 1068 TVALSTTEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERT 1127
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHIDVRYHF+R +E +KV K+ T DNPADM TK VP
Sbjct: 1128 KHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVP 1166
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 192 bits (487), Expect = 1e-46
Identities = 99/159 (62%), Positives = 119/159 (74%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGTS L +G + LV GY DSD+AGD+D RRS+TGYVFT+GG VSWKA+LQ
Sbjct: 1069 FRYLRGTSSACLQFGRSSDGLV-GYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKASLQA 1127
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TV LSTTEAEYMA++EA KE IWL+GL ++L ++CDS SAICL KDQ+ HERT
Sbjct: 1128 TVALSTTEAEYMAISEACKEVIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERT 1187
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHID+RYHF+R +E +KV K+ T DNP DM TK VP
Sbjct: 1188 KHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVP 1226
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 191 bits (485), Expect = 2e-46
Identities = 98/159 (61%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
F+YLRGTS L +G LV GY DSD+AGD+D RRS+TGYVFT+GG VSWKA+LQ
Sbjct: 1039 FKYLRGTSSACLQFGRSRDGLV-GYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQA 1097
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TV LSTTE EYMA++EA KE IWL+GL ++L ++CDS SAIC KDQ+ HERT
Sbjct: 1098 TVALSTTEVEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICFTKDQMFHERT 1157
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHIDVRYHF+R +E +KV K+ T DNPADM TK VP
Sbjct: 1158 KHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVP 1196
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 190 bits (483), Expect = 3e-46
Identities = 100/159 (62%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYL GTS L +G LV GY DSD+AGD+D RRS+ GYVFT+GG VSWKA LQ
Sbjct: 966 FRYLCGTSSACLQFGRSRDGLV-GYVDSDFAGDLDRRRSLAGYVFTIGGCAVSWKANLQA 1024
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TV LSTTEAEYMA++EA KE IWL+GL ++L ++CDS SAICL KDQ+ HERT
Sbjct: 1025 TVALSTTEAEYMAISEACKETIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERT 1084
Query: 110 KHIDVRYHFLRS---EKRIKVNKVGTADNPADMFTKSVP 3
KHIDVRYHF+RS E +KV K+ T DNPADM TK VP
Sbjct: 1085 KHIDVRYHFIRSVITEGDVKVCKISTHDNPADMMTKPVP 1123
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 189 bits (480), Expect = 6e-46
Identities = 95/159 (59%), Positives = 118/159 (74%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGT+D L +G + LV GY DSD+A D+D RRS+TGYVFT+G VSWKATLQP
Sbjct: 121 FRYLRGTTDACLKFGRTDKGLV-GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQP 179
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
V STTEAEYMA+ EA KE +WLKGL ++L ++CDS SAICL KDQ+ HERT
Sbjct: 180 IVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERT 239
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHID++YH++R ++ ++KV K+ T DNPADM TK VP
Sbjct: 240 KHIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMTKPVP 278
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 188 bits (478), Expect = 1e-45
Identities = 86/158 (54%), Positives = 119/158 (75%), Gaps = 3/158 (1%)
Frame = -1
Query: 467 RYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQPT 288
RYL+G D+ L++ + VTGY DS+YA D+D RRS++GYVFT+GG+ VSWKA+LQP
Sbjct: 1182 RYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPV 1241
Query: 287 VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERTK 108
V +STTEAEY+AL EAAKE +W+KGL+ D+G+ D+ ++CDS SAICL+K+ V+HERTK
Sbjct: 1242 VAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTK 1301
Query: 107 HIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
HIDVR++++R + V K+ T+ NP D TK +P
Sbjct: 1302 HIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIP 1339
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 188 bits (478), Expect = 1e-45
Identities = 92/158 (58%), Positives = 116/158 (73%), Gaps = 3/158 (1%)
Frame = -1
Query: 467 RYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQPT 288
RY++GT D L + D + + GY DSDYA D+D RRS+TG+VFT GG+ +SWK+ LQ
Sbjct: 1169 RYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRV 1228
Query: 287 VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERTK 108
V LSTTEAEYMAL EA KE IWL+GL +++G D V CDS SAI L+K+ VHHERTK
Sbjct: 1229 VALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTK 1288
Query: 107 HIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
HIDVRYHF+R ++ I+V K+ T NPAD+FTK+VP
Sbjct: 1289 HIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVP 1326
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 187 bits (475), Expect = 2e-45
Identities = 97/159 (61%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGTS L +G LV GY DSD+AGD+D RS+ GYVFT+GG VSWKA+LQ
Sbjct: 1367 FRYLRGTSSACLQFGRSRDGLV-GYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKASLQA 1425
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TV LSTTEAEYMA++EA KE IWL+GL + L ++CDS SAICL KDQ+ HERT
Sbjct: 1426 TVALSTTEAEYMAISEACKEAIWLRGLYTVLCAVTSCINIFCDSQSAICLTKDQMFHERT 1485
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHIDVRYHF+R +E +K+ K+ DNPADM TK VP
Sbjct: 1486 KHIDVRYHFIRGLIAEGDVKICKISIHDNPADMMTKPVP 1524
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 186 bits (473), Expect = 4e-45
Identities = 92/160 (57%), Positives = 119/160 (74%), Gaps = 5/160 (3%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQC--LVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATL 297
F+YL GT +GL+YGG++Q + G+ D+DYAG++D+R+S+TGYVFT G VSWKA L
Sbjct: 1032 FQYLAGTRSLGLVYGGNSQLETQLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANL 1091
Query: 296 QPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHE 117
Q V LSTTEAEYMA+TEA KE IWLKG+ +L ++ + +VYCD+ SAI LAK+Q HE
Sbjct: 1092 QSVVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHE 1151
Query: 116 RTKHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSV 6
R+KHIDVR HF+R + I V KV T DNP+DM TKS+
Sbjct: 1152 RSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSL 1191
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 186 bits (472), Expect = 5e-45
Identities = 90/158 (56%), Positives = 117/158 (74%), Gaps = 4/158 (2%)
Frame = -1
Query: 467 RYLRGTSDVGLIYG-GDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
RYL+G+S V L+YG GD + G++DSD+ GD+ RRS+T Y+FTL G +SW+A+LQP
Sbjct: 1224 RYLKGSSSVCLVYGNGDVSSGLVGFTDSDHGGDLMKRRSLTCYIFTLFGCAISWRASLQP 1283
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TV LSTTEAEYM+LTE KEG+WL G + LGL+ + ++YCDS SA+CLAK+ V+HERT
Sbjct: 1284 TVALSTTEAEYMSLTEGVKEGMWLNGFLGSLGLNLSKPVIYCDSQSALCLAKNPVYHERT 1343
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSV 6
KHIDVR +F+R EK + KV T NPADM TK +
Sbjct: 1344 KHIDVRLNFIRDVIEEKLFSIEKVATEVNPADMLTKPI 1381
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 186 bits (472), Expect = 5e-45
Identities = 90/158 (56%), Positives = 117/158 (74%), Gaps = 4/158 (2%)
Frame = -1
Query: 467 RYLRGTSDVGLIYG-GDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
RYL+G+S V L+YG GD + G++DSD+ GD+ RRS+T Y+FTL G +SW+A+LQP
Sbjct: 1461 RYLKGSSSVCLVYGNGDVSSGLVGFTDSDHGGDLMKRRSLTCYIFTLFGCAISWRASLQP 1520
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
TV LSTTEAEYM+LTE KEG+WL G + LGL+ + ++YCDS SA+CLAK+ V+HERT
Sbjct: 1521 TVALSTTEAEYMSLTEGVKEGMWLNGFLGSLGLNLSKPVIYCDSQSALCLAKNPVYHERT 1580
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSV 6
KHIDVR +F+R EK + KV T NPADM TK +
Sbjct: 1581 KHIDVRLNFIRDVIEEKLFSIEKVATEVNPADMLTKPI 1618
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 186 bits (472), Expect = 5e-45
Identities = 93/159 (58%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGT+D L +G + LV GY DSD+A D+D RRS+TGYVFT+G VSWKATLQP
Sbjct: 1150 FRYLRGTADACLKFGRIDKGLV-GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQP 1208
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
V STTEAEYMA+ EA KE +WLKGL ++L ++CDS SAICL KDQ+ HERT
Sbjct: 1209 VVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERT 1268
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHID++YH++R ++ ++KV K+ DNPADM TK +P
Sbjct: 1269 KHIDIKYHYVRDIVAQGKLKVCKISIHDNPADMMTKPIP 1307
>ref|NP_001174752.1| Os06g0316600 [Oryza sativa Japonica Group]
gi|255676990|dbj|BAH93480.1| Os06g0316600 [Oryza sativa
Japonica Group]
Length = 759
Score = 186 bits (471), Expect = 7e-45
Identities = 94/159 (59%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGT+D L +G + LV GY DSD+A D+D RRS+TGYVFT+G VSWKATLQP
Sbjct: 587 FRYLRGTADACLKFGRTDKGLV-GYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQP 645
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
V STTEAEYMA+ EA KE +WLKGL + L ++CDS SAICL KDQ+ HERT
Sbjct: 646 IVAQSTTEAEYMAIAEACKESVWLKGLFAKLCGVDSCINLFCDSQSAICLTKDQMFHERT 705
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
K+ID++YH++R ++ ++KV K+ T DNPADM TK VP
Sbjct: 706 KYIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMTKPVP 744
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 183 bits (464), Expect = 4e-44
Identities = 85/158 (53%), Positives = 115/158 (72%), Gaps = 3/158 (1%)
Frame = -1
Query: 467 RYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQPT 288
RY++GT D L Y ++ + GY D+DYA D+D RRS+TG VFTLGG+ +SWK+ LQ
Sbjct: 1190 RYIKGTVDTRLCYKRNSDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1249
Query: 287 VTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERTK 108
V S+TE EYM+LTEA KE IWLKGL+ D G ++CDS SAI L+K+ VHHERTK
Sbjct: 1250 VAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTK 1309
Query: 107 HIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
HIDV++HF+R ++ +++V+K+ T NPAD+FTK +P
Sbjct: 1310 HIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLP 1347
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 181 bits (460), Expect = 1e-43
Identities = 94/159 (59%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGT+ L +G + L+ GY DSDYA D+D RRS+TGYVFT+G VSW+ATLQ
Sbjct: 1161 FRYLRGTTYSCLKFGRTDKGLI-GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQS 1219
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
V LSTTEAEYMA+ EA KE IWLKGL ++L ++CDS SAI L KDQ+ HERT
Sbjct: 1220 VVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERT 1279
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHID++YHF+R E ++KV K+ T DNPADM TK +P
Sbjct: 1280 KHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIP 1318
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 181 bits (460), Expect = 1e-43
Identities = 94/159 (59%), Positives = 115/159 (72%), Gaps = 3/159 (1%)
Frame = -1
Query: 470 FRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDSRRSMTGYVFTLGGSVVSWKATLQP 291
FRYLRGT+ L +G + L+ GY DSDYA D+D RRS+TGYVFT+G VSW+ATLQ
Sbjct: 1161 FRYLRGTTYSCLKFGRTDKGLI-GYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQS 1219
Query: 290 TVTLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQAIVYCDSLSAICLAKDQVHHERT 111
V LSTTEAEYMA+ EA KE IWLKGL ++L ++CDS SAI L KDQ+ HERT
Sbjct: 1220 VVALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSAIYLTKDQMFHERT 1279
Query: 110 KHIDVRYHFLR---SEKRIKVNKVGTADNPADMFTKSVP 3
KHID++YHF+R E ++KV K+ T DNPADM TK +P
Sbjct: 1280 KHIDIKYHFVRDVIEEGKLKVCKISTHDNPADMMTKPIP 1318