BLASTX nr result

ID: Anemarrhena21_contig00027131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Anemarrhena21_contig00027131
         (452 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010926893.1| PREDICTED: pentatricopeptide repeat-containi...    92   1e-16
ref|XP_008807162.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_008807161.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_009393288.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_009393287.1| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   5e-06

>ref|XP_010926893.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic [Elaeis guineensis]
          Length = 865

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
 Frame = -1

Query: 335 GAMPNSFSVHKFAA----IFGITWSSSGMRKTWDVDEIKPIISIVSALGNGEVESHSTSV 168
           G+  NS S H F      +  IT +S  + K+WD D  KP + + +AL NGE+E+HST  
Sbjct: 22  GSSLNSCSGHGFLIPGRPVSSITLNSLRVTKSWDFDVRKPKLRVANALANGEIEAHSTPG 81

Query: 167 QLVEQDLKFSPTFQDYLKVMESVKMDRSKNPNENVDVVTPKKRSVERSA 21
           +L+E + KF+PTF DY+KVMESVKMDRS     ++D  + KKRS  + A
Sbjct: 82  RLLEDEFKFNPTFNDYVKVMESVKMDRSHKLIGDLDEYSSKKRSTGKDA 130


>ref|XP_008807162.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 854

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
 Frame = -1

Query: 335 GAMPNSFSVHKFAA----IFGITWSSSGMRKTWDVDEIKPIISIVSALGNGEVESHSTSV 168
           G+  NS S H F      +   T +S  + K+WD D  KP + + +AL NGE+E+ ST  
Sbjct: 26  GSPLNSCSGHGFLISGRPVSSNTLNSLRVTKSWDFDVRKPKLRVANALANGEIEAPSTPS 85

Query: 167 QLVEQDLKFSPTFQDYLKVMESVKMDRSKNPNENVDVVTPKKRSVERSA 21
           +L+E + KFSPTF DY+KVMESVKM R++    +VD    KKRS  + A
Sbjct: 86  RLLENEFKFSPTFNDYVKVMESVKMGRNQKLIGDVDAYNSKKRSTGKDA 134


>ref|XP_008807161.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic isoform X1 [Phoenix dactylifera]
          Length = 865

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
 Frame = -1

Query: 335 GAMPNSFSVHKFAA----IFGITWSSSGMRKTWDVDEIKPIISIVSALGNGEVESHSTSV 168
           G+  NS S H F      +   T +S  + K+WD D  KP + + +AL NGE+E+ ST  
Sbjct: 26  GSPLNSCSGHGFLISGRPVSSNTLNSLRVTKSWDFDVRKPKLRVANALANGEIEAPSTPS 85

Query: 167 QLVEQDLKFSPTFQDYLKVMESVKMDRSKNPNENVDVVTPKKRSVERSA 21
           +L+E + KFSPTF DY+KVMESVKM R++    +VD    KKRS  + A
Sbjct: 86  RLLENEFKFSPTFNDYVKVMESVKMGRNQKLIGDVDAYNSKKRSTGKDA 134


>ref|XP_009393288.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic isoform X2 [Musa acuminata subsp.
           malaccensis]
          Length = 1086

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 30/84 (35%), Positives = 49/84 (58%)
 Frame = -1

Query: 263 MRKTWDVDEIKPIISIVSALGNGEVESHSTSVQLVEQDLKFSPTFQDYLKVMESVKMDRS 84
           + K W+ D       +  AL + E  S S + + +E++LKFSP F DY+KV+ESV++DRS
Sbjct: 50  LAKNWNFDAGSTKCRLCCALASEEDGSSSVASRFIEKELKFSPAFSDYVKVLESVRVDRS 109

Query: 83  KNPNENVDVVTPKKRSVERSATHR 12
           K+   + D    K+ S+ +  + R
Sbjct: 110 KDSGGDEDRYGSKQTSIAKGKSFR 133


>ref|XP_009393287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
           chloroplastic isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 1105

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 30/84 (35%), Positives = 49/84 (58%)
 Frame = -1

Query: 263 MRKTWDVDEIKPIISIVSALGNGEVESHSTSVQLVEQDLKFSPTFQDYLKVMESVKMDRS 84
           + K W+ D       +  AL + E  S S + + +E++LKFSP F DY+KV+ESV++DRS
Sbjct: 50  LAKNWNFDAGSTKCRLCCALASEEDGSSSVASRFIEKELKFSPAFSDYVKVLESVRVDRS 109

Query: 83  KNPNENVDVVTPKKRSVERSATHR 12
           K+   + D    K+ S+ +  + R
Sbjct: 110 KDSGGDEDRYGSKQTSIAKGKSFR 133


>dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 969

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 22/91 (24%)
 Frame = -1

Query: 209 ALGNGEVESHSTSVQLVEQDLKFSPTFQDYLKVMESVKMDRSKN---------------- 78
           AL +GE  + S+ ++ +E++L FSPTF DY+K+MESVK+DRSK+                
Sbjct: 67  ALASGEAGAGSSELRHIEKELTFSPTFTDYVKMMESVKLDRSKSLQGGDSDGRSSRRRFD 126

Query: 77  ---PNENVDVVTPKKRSVER---SATHRGRE 3
                E+ + + P+K+S ER   S   RGR+
Sbjct: 127 GDGRREDRESIDPRKKSFERKTGSQRERGRD 157


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