BLASTX nr result
ID: Anemarrhena21_contig00023602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00023602
(336 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 113 3e-32
ref|XP_010662484.1| PREDICTED: uncharacterized protein LOC104882... 93 6e-17
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 52 3e-12
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 57 5e-12
ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905... 54 9e-12
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 56 4e-11
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 50 1e-10
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 52 3e-10
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 52 3e-10
gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana] 49 7e-10
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 53 9e-10
gb|ACB45089.1| putative polyprotein [Solanum habrochaites] 47 1e-09
ref|XP_003621710.1| Receptor-like protein kinase [Medicago trunc... 54 2e-09
ref|XP_008245294.1| PREDICTED: uncharacterized protein LOC103343... 44 2e-09
ref|XP_010667912.1| PREDICTED: uncharacterized protein LOC104884... 48 5e-09
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 47 6e-09
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 45 6e-09
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 45 6e-09
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 45 6e-09
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei... 45 6e-09
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 113 bits (283), Expect(2) = 3e-32
Identities = 53/77 (68%), Positives = 61/77 (79%)
Frame = +1
Query: 1 LRQICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHPSSKVSS 180
LRQ+CFIQDLQSGK IG G E EGLY L ++GTCNVVN+ + DLWH+RLGHPSSKVS
Sbjct: 487 LRQVCFIQDLQSGKMIGMGTESEGLYCLNLPRKGTCNVVNTKTQDLWHQRLGHPSSKVSV 546
Query: 181 LFSFPANKSYNASTCSI 231
LF F NK+ + STCSI
Sbjct: 547 LFPFLQNKTLDVSTCSI 563
Score = 51.6 bits (122), Expect(2) = 3e-32
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK TR FPLS + S SCF+LIHVDIWG
Sbjct: 564 CPLAKHTRTPFPLSVSSSDSCFDLIHVDIWG 594
>ref|XP_010662484.1| PREDICTED: uncharacterized protein LOC104882143 [Vitis vinifera]
Length = 1207
Score = 93.2 bits (230), Expect = 6e-17
Identities = 42/68 (61%), Positives = 51/68 (75%)
Frame = +1
Query: 1 LRQICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHPSSKVSS 180
LRQ+CFIQDLQSGK IG G E EGLY L ++GTCNVVN+ + DLWH+RLGHPS+K
Sbjct: 487 LRQVCFIQDLQSGKMIGMGTESEGLYCLNLPRKGTCNVVNTKTQDLWHQRLGHPSNKGYK 546
Query: 181 LFSFPANK 204
++S K
Sbjct: 547 VYSLKDKK 554
>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 51.6 bits (122), Expect(2) = 3e-12
Identities = 24/52 (46%), Positives = 29/52 (55%)
Frame = +1
Query: 13 CFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHPSS 168
C +QD + KTIG G + GLYYL + DLWH+RLGHPSS
Sbjct: 497 CVVQDATTRKTIGLGKQHNGLYYLAQDQNPALAYAIHKHSDLWHQRLGHPSS 548
Score = 46.2 bits (108), Expect(2) = 3e-12
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK TR SFP S SH+ F+LIH DIWG
Sbjct: 572 CPLAKQTRLSFPSSFISSHAPFDLIHCDIWG 602
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 56.6 bits (135), Expect(2) = 5e-12
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 7 QICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHPSSKVSSLF 186
++C IQD + IG G + GLY+ R ++ S LWH RLGHPSSKV L
Sbjct: 427 KVCIIQDRITLTLIGAGKQQNGLYFFRGTETVASMTRMDSSSQLWHCRLGHPSSKVLKLL 486
Query: 187 SF--PANKSYNASTCSI 231
SF ++++ TC I
Sbjct: 487 SFSDSTGHAFDSKTCEI 503
Score = 40.4 bits (93), Expect(2) = 5e-12
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
C AK TR FPLSN + S FE++H D+WG
Sbjct: 504 CIKAKQTRDPFPLSNNKTSSPFEMVHCDLWG 534
>ref|XP_010692480.1| PREDICTED: uncharacterized protein LOC104905592 [Beta vulgaris
subsp. vulgaris]
Length = 1085
Score = 53.9 bits (128), Expect(2) = 9e-12
Identities = 34/69 (49%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 10 ICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSP---DLWHKRLGHPSSKVSS 180
+C IQDL SG IG G GLYY F V PS DLWH+RLGHPS +V
Sbjct: 481 LCAIQDLPSGTLIGAGERRGGLYY--FRTVAVVQAVGVPSLSLFDLWHQRLGHPSERVVK 538
Query: 181 LFSFPANKS 207
L PA KS
Sbjct: 539 L--LPAIKS 545
Score = 42.4 bits (98), Expect(2) = 9e-12
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CP+AK TR SFP S + FEL+H D+WG
Sbjct: 559 CPMAKQTRDSFPTSEHKASRLFELVHCDLWG 589
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 55.8 bits (133), Expect(2) = 4e-11
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Frame = +1
Query: 7 QICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNS---PSPDLWHKRLGHPSSKVS 177
++C +QD + IG G E GLY+ R + T V S PS LWH+RLGHPSSK
Sbjct: 462 KVCIVQDRTTLMLIGAGRELNGLYFFRGVE--TAAAVTSKALPSSQLWHQRLGHPSSKAL 519
Query: 178 SL--FSFPANKSYNASTCSI 231
L FS + ++++ TC I
Sbjct: 520 HLLPFSDVTSSTFDSKTCEI 539
Score = 38.1 bits (87), Expect(2) = 4e-11
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
C AK TR FPLS+ + FEL+H D+WG
Sbjct: 540 CIQAKQTRDPFPLSSNKTSFAFELVHCDLWG 570
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 49.7 bits (117), Expect(2) = 1e-10
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +1
Query: 13 CFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHPSS 168
C +QD + KT G G + GLYYL + DLWH+RLGHPSS
Sbjct: 89 CVVQDATTRKTXGLGKQHNGLYYLAQDQNPALAYAIHKHSDLWHQRLGHPSS 140
Score = 42.7 bits (99), Expect(2) = 1e-10
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +3
Query: 234 PLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
PLAK TR SFP S SH+ F+LIH DIWG
Sbjct: 165 PLAKQTRLSFPSSFISSHAPFDLIHCDIWG 194
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 52.0 bits (123), Expect(2) = 3e-10
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 10 ICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVN-SPSPDLWHKRLGHPSSKVSSLF 186
IC +QD S IGTG E +G+YYL + T + V+ + LWH+RLGHPS V L
Sbjct: 469 ICVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSV--LS 526
Query: 187 SFPANKSYNASTCSI 231
S P ++ S+CS+
Sbjct: 527 SLPL---FSGSSCSV 538
Score = 38.9 bits (89), Expect(2) = 3e-10
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
C AK TR+ FP S+ S CF LIH D+WG
Sbjct: 546 CFRAKQTREVFPDSSNKSTDCFSLIHCDVWG 576
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 52.0 bits (123), Expect(2) = 3e-10
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 10 ICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVN-SPSPDLWHKRLGHPSSKVSSLF 186
IC +QD S IGTG E +G+YYL + T + V+ + LWH+RLGHPS V L
Sbjct: 469 ICVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSV--LS 526
Query: 187 SFPANKSYNASTCSI 231
S P ++ S+CS+
Sbjct: 527 SLPL---FSGSSCSV 538
Score = 38.9 bits (89), Expect(2) = 3e-10
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
C AK TR+ FP S+ S CF LIH D+WG
Sbjct: 546 CFRAKQTREVFPDSSNKSTDCFSLIHCDVWG 576
>gb|AAF79427.1|AC025808_9 F18O14.19 [Arabidopsis thaliana]
Length = 1158
Score = 49.3 bits (116), Expect(2) = 7e-10
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 7 QICFIQDLQSGKTIGTGIEDEGLYYLR-FSKEGTCNVVNSPSPDLWHKRLGHPSSKVSSL 183
++C IQD + IG G + GLY+ R +S D+WH+RLGHPSSK +
Sbjct: 258 KVCVIQDRITKTLIGAGEQLNGLYFFRGLGVAAPVQHKDSTPIDVWHRRLGHPSSKAMEM 317
Query: 184 FSFP--ANKSYNASTCSI 231
F ++ +++ C I
Sbjct: 318 LKFSDFSSSGFDSKDCEI 335
Score = 40.4 bits (93), Expect(2) = 7e-10
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
C AK TR SFPLS+ + FELIH D+WG
Sbjct: 336 CISAKQTRDSFPLSSNKTSFAFELIHCDLWG 366
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 53.1 bits (126), Expect(2) = 9e-10
Identities = 28/59 (47%), Positives = 33/59 (55%)
Frame = +1
Query: 13 CFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHPSSKVSSLFS 189
C +QDL SGK IG+G + GLYY+ S + S DLWH RLGHPS L S
Sbjct: 728 CILQDLVSGKMIGSGKQRGGLYYMHPSTNKSVVFHVSQPSDLWHLRLGHPSFSRFKLLS 786
Score = 36.2 bits (82), Expect(2) = 9e-10
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CP AK TR FP S+ + F L+H D+WG
Sbjct: 803 CPQAKQTRLPFPKSSITTKFPFSLLHCDVWG 833
>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
Length = 849
Score = 46.6 bits (109), Expect(2) = 1e-09
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Frame = +1
Query: 13 CFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPS--------PDLWHKRLGHPSS 168
C +QDL + K GTG + GLYY T SPS DLWH+RLGH
Sbjct: 217 CILQDLHTVKVKGTGSMENGLYYWSHIVSPTVAYSVSPSVALSTLDDVDLWHRRLGHIPH 276
Query: 169 KVSSLFSFP-ANKSYNASTCSI 231
KV P + S ++C I
Sbjct: 277 KVLQQMQIPHISSSSKLTSCPI 298
Score = 42.7 bits (99), Expect(2) = 1e-09
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK TR FP S T + + F+LIH D+WG
Sbjct: 299 CPLAKQTRLPFPQSPTRADNVFDLIHADVWG 329
>ref|XP_003621710.1| Receptor-like protein kinase [Medicago truncatula]
Length = 1085
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = +1
Query: 19 IQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHPS 165
I D GKTIGTG +G+YYL C V S SPD+ H+RLGHPS
Sbjct: 118 IHDCNKGKTIGTGYVSQGIYYLHSQSSTICGV--SASPDMIHRRLGHPS 164
Score = 34.3 bits (77), Expect(2) = 2e-09
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 228 NCPLAKLTRQSFPLS-NTISHSCFELIHVDIWG 323
+C L K R SFP S N S S F+++H D+WG
Sbjct: 185 SCQLGKHVRASFPSSPNKRSKSPFDIVHSDVWG 217
>ref|XP_008245294.1| PREDICTED: uncharacterized protein LOC103343416 [Prunus mume]
Length = 582
Score = 44.3 bits (103), Expect(2) = 2e-09
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK TR SFP S+ S + F+LIH DIWG
Sbjct: 542 CPLAKQTRLSFPSSSISSKAHFDLIHCDIWG 572
Score = 43.9 bits (102), Expect(2) = 2e-09
Identities = 22/50 (44%), Positives = 28/50 (56%)
Frame = +1
Query: 13 CFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSPDLWHKRLGHP 162
C IQD+ + +TIG G GLYYL + S + LWH+RLGHP
Sbjct: 467 CVIQDMDTRRTIGLGKRYNGLYYLAPEQNPRLAHHISRNSILWHQRLGHP 516
>ref|XP_010667912.1| PREDICTED: uncharacterized protein LOC104884908 [Beta vulgaris
subsp. vulgaris]
Length = 1117
Score = 47.8 bits (112), Expect(2) = 5e-09
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Frame = +1
Query: 25 DLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSPSP---DLWHKRLGHPSSKVSSL---F 186
DL SG IG G +GLYY R C V + P+ +LWH+R GHPS K+ L F
Sbjct: 384 DLCSGNLIGAGERKDGLYYYR-GIPSVCVVTSPPAVSEFELWHRRFGHPSDKIVKLLPVF 442
Query: 187 SFPANKSYNASTCSI 231
S + C++
Sbjct: 443 SSSGSSKSLPKACTV 457
Score = 39.3 bits (90), Expect(2) = 5e-09
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CP AK +R SFP S + FELIH D+WG
Sbjct: 458 CPQAKQSRPSFPTSYNKASRIFELIHCDLWG 488
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 46.6 bits (109), Expect(2) = 6e-09
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +1
Query: 13 CFIQDLQSGKTIGTGIEDEGLYYLRFSKEGTCNVVNSP---SPDLWHKRLGHPSSKVSSL 183
CF+QD IG G E EG+YY + +S S DLWH+RLGHPS+ V L
Sbjct: 457 CFLQDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSV--L 514
Query: 184 FSFP 195
S P
Sbjct: 515 LSLP 518
Score = 40.0 bits (92), Expect(2) = 6e-09
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
C +K TR+ FP+SN + CF LIH D+WG
Sbjct: 536 CFRSKQTREVFPISNNKTMECFSLIHGDVWG 566
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 45.4 bits (106), Expect(2) = 6e-09
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK R SFP+S+ +S FEL+HVD+WG
Sbjct: 613 CPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 643
Score = 41.2 bits (95), Expect(2) = 6e-09
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 4 RQICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGT---------CNVVNSPSPDLWHKRLG 156
R IQDL G IG G + LY L + C +++ + DLWH RLG
Sbjct: 523 RDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 582
Query: 157 HPSS-KVSSLFSFPANKSYNASTCSI 231
HPS +V S+ K + T SI
Sbjct: 583 HPSDIRVHSIDKSSELKFSTSETSSI 608
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 45.4 bits (106), Expect(2) = 6e-09
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK R SFP+S+ +S FEL+HVD+WG
Sbjct: 582 CPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 612
Score = 41.2 bits (95), Expect(2) = 6e-09
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 4 RQICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGT---------CNVVNSPSPDLWHKRLG 156
R IQDL G IG G + LY L + C +++ + DLWH RLG
Sbjct: 492 RDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 551
Query: 157 HPSS-KVSSLFSFPANKSYNASTCSI 231
HPS +V S+ K + T SI
Sbjct: 552 HPSDIRVHSIDKSSELKFSTSETSSI 577
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 45.4 bits (106), Expect(2) = 6e-09
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK R SFP+S+ +S FEL+HVD+WG
Sbjct: 613 CPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 643
Score = 41.2 bits (95), Expect(2) = 6e-09
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 4 RQICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGT---------CNVVNSPSPDLWHKRLG 156
R IQDL G IG G + LY L + C +++ + DLWH RLG
Sbjct: 523 RDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 582
Query: 157 HPSS-KVSSLFSFPANKSYNASTCSI 231
HPS +V S+ K + T SI
Sbjct: 583 HPSDIRVHSIDKSSELKFSTSETSSI 608
>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X4 [Tarenaya hassleriana]
Length = 940
Score = 45.4 bits (106), Expect(2) = 6e-09
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 231 CPLAKLTRQSFPLSNTISHSCFELIHVDIWG 323
CPLAK R SFP+S+ +S FEL+HVD+WG
Sbjct: 278 CPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 308
Score = 41.2 bits (95), Expect(2) = 6e-09
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 4 RQICFIQDLQSGKTIGTGIEDEGLYYLRFSKEGT---------CNVVNSPSPDLWHKRLG 156
R IQDL G IG G + LY L + C +++ + DLWH RLG
Sbjct: 188 RDSFIIQDLTRGLMIGKGKQLHNLYILEMLHTSSTTISLPSKFCTTLSATTFDLWHHRLG 247
Query: 157 HPSS-KVSSLFSFPANKSYNASTCSI 231
HPS +V S+ K + T SI
Sbjct: 248 HPSDIRVHSIDKSSELKFSTSETSSI 273