BLASTX nr result
ID: Anemarrhena21_contig00020231
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Anemarrhena21_contig00020231
(853 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009413552.1| PREDICTED: pentatricopeptide repeat-containi... 86 3e-28
ref|XP_010326841.1| PREDICTED: pentatricopeptide repeat-containi... 79 4e-28
ref|XP_006360955.1| PREDICTED: pentatricopeptide repeat-containi... 79 5e-28
ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi... 80 7e-27
emb|CBI17228.3| unnamed protein product [Vitis vinifera] 80 7e-27
ref|XP_009768191.1| PREDICTED: pentatricopeptide repeat-containi... 79 3e-26
ref|XP_009610515.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-25
ref|XP_007034318.1| Tetratricopeptide repeat-like superfamily pr... 74 5e-25
emb|CDP11132.1| unnamed protein product [Coffea canephora] 84 3e-24
ref|XP_010274081.1| PREDICTED: pentatricopeptide repeat-containi... 84 4e-24
ref|XP_010921855.1| PREDICTED: pentatricopeptide repeat-containi... 59 8e-22
ref|XP_010906663.1| PREDICTED: pentatricopeptide repeat-containi... 55 9e-21
ref|XP_004300036.2| PREDICTED: pentatricopeptide repeat-containi... 54 1e-20
ref|XP_008808540.1| PREDICTED: pentatricopeptide repeat-containi... 57 1e-19
ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Sela... 58 2e-19
ref|XP_010243344.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-19
ref|XP_011627462.1| PREDICTED: pentatricopeptide repeat-containi... 55 2e-19
ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Sela... 58 4e-19
ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prun... 52 9e-19
ref|XP_002300166.1| pentatricopeptide repeat-containing family p... 65 1e-18
>ref|XP_009413552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840
[Musa acuminata subsp. malaccensis]
Length = 688
Score = 85.5 bits (210), Expect(3) = 3e-28
Identities = 62/162 (38%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS-QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTVGGC 582
M ++ D VLWG+ + +A+K V+LA +AAEK + R ++ S G
Sbjct: 478 MPMEPDFVLWGAFFNACRANKNVELAEVAAEKLLNFRP------KHQGTFIFLSNMYSGA 531
Query: 581 *GGANSYEKL-------SCGEMTRMEFHRDSGK*H*FVASDHSHSRSKEIY---EELERW 432
+ EK+ + + G H FVA D SH RSKEIY EEL
Sbjct: 532 GRWDDDAEKVRTVMKDSGIERLPGWSYIEVEGGGHRFVAGDRSHPRSKEIYGKLEELATR 591
Query: 431 GQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ +WVLHNIE+EDKE+SLGCH EKL +LGLLST
Sbjct: 592 AKEQGYEPDTDWVLHNIEDEDKEESLGCHSEKLALALGLLST 633
Score = 62.4 bits (150), Expect(3) = 3e-28
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK S++ KVI+LRDIK FH FKDG C C DYW
Sbjct: 648 CGDCHLLMKFASKLCNKVIILRDIKRFHHFKDGRCSCGDYW 688
Score = 25.8 bits (55), Expect(3) = 3e-28
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 837 TLKH*TRLVDWYGKAGRFD 781
T+KH T +VD +G+AGR +
Sbjct: 451 TIKHYTCMVDLFGRAGRLN 469
>ref|XP_010326841.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840
[Solanum lycopersicum] gi|723732949|ref|XP_010326842.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g04840 [Solanum lycopersicum]
gi|723732952|ref|XP_004247960.2| PREDICTED:
pentatricopeptide repeat-containing protein At1g04840
[Solanum lycopersicum] gi|723732955|ref|XP_010326843.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g04840 [Solanum lycopersicum]
gi|723732958|ref|XP_010326844.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g04840
[Solanum lycopersicum]
Length = 666
Score = 79.3 bits (194), Expect(3) = 4e-28
Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 13/164 (7%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS--QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTVGG 585
M ++ D V+WG+L FS +AHK +++A++A+EK ++L YV S G
Sbjct: 457 MPLEPDYVIWGAL-FSACRAHKNIEMAKVASEKLLQLEP------KHAGGYVFLSNVYAG 509
Query: 584 C*GGANSYEKLSCGEMTRMEFHRD--------SGK*H*FVASDHSHSRSKEIY---EELE 438
G + E++ M +D +G+ H FVA D +H+R +EIY EE+
Sbjct: 510 A-GRWDDVERVR-SSMKNKNVEKDPGWSSMEVAGQLHTFVAGDSAHTRKQEIYLKLEEII 567
Query: 437 RWGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ EWVLHNI+EE+KE +LG H EKL + GL+ST
Sbjct: 568 TGAKQQGYMPETEWVLHNIDEEEKEGALGSHSEKLALAFGLIST 611
Score = 61.2 bits (147), Expect(3) = 4e-28
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK VSR+ +VI+LRDIK FH FKDG C C DYW
Sbjct: 626 CGDCHSLMKYVSRMSQRVIVLRDIKRFHHFKDGVCSCKDYW 666
Score = 32.7 bits (73), Expect(3) = 4e-28
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 849 SSKSTLKH*TRLVDWYGKAGRFDRPLKYL 763
S + T+KH +VD G+AGRFD LK++
Sbjct: 426 SIEPTMKHYAAVVDLLGRAGRFDEALKFI 454
>ref|XP_006360955.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like isoform X1 [Solanum tuberosum]
gi|565390461|ref|XP_006360956.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g04840-like isoform X2 [Solanum tuberosum]
Length = 666
Score = 79.0 bits (193), Expect(3) = 5e-28
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS--QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTVGG 585
M ++ D V+WG+L FS +AHK +++A++A+EK ++L YV S G
Sbjct: 457 MPLEPDYVIWGAL-FSACRAHKNIEMAKVASEKLLQLEP------KHAGGYVFLSNVYAG 509
Query: 584 C*GGANSYEKLSCGEMTRMEFHRD--------SGK*H*FVASDHSHSRSKEIY---EELE 438
G + E++ M +D G+ H FVA D +H+R +EIY EE+
Sbjct: 510 A-GRWDDVERVR-SSMKNKNVEKDPGWSSMEVDGQLHTFVAGDSAHTRKQEIYLKLEEII 567
Query: 437 RWGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ EWVLHNI+EE+KE +LG H EKL + GL+ST
Sbjct: 568 TGAKQQGYMPETEWVLHNIDEEEKEGALGSHSEKLALAFGLIST 611
Score = 61.2 bits (147), Expect(3) = 5e-28
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK VSR+ +VI+LRDIK FH FKDG C C DYW
Sbjct: 626 CGDCHSLMKYVSRMSQRVIVLRDIKRFHHFKDGVCSCKDYW 666
Score = 32.7 bits (73), Expect(3) = 5e-28
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 849 SSKSTLKH*TRLVDWYGKAGRFDRPLKYL 763
S + T+KH +VD G+AGRFD LK++
Sbjct: 426 SIEPTMKHYAAVVDLLGRAGRFDEALKFI 454
>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein At1g04840
[Vitis vinifera]
Length = 677
Score = 80.1 bits (196), Expect(4) = 7e-27
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Frame = -3
Query: 767 IYFMSVKLDIVLWGSL*FS-QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTV 591
I M + D V+WG+L + +AHK +++A L AEK ++L P YV S V
Sbjct: 465 IQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEP------KHPGSYVFLS-NV 517
Query: 590 GGC*GGANSYEKLSCGEMTR-------MEFHRDSGK*H*FVASDHSHSRSKEI---YEEL 441
G E++ R + G+ H FVA DH+H R++EI EE+
Sbjct: 518 YAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEI 577
Query: 440 ERWGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ WVLHNIEEE+KED+LG H EKL + GL+ST
Sbjct: 578 TASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLIST 622
Score = 56.2 bits (134), Expect(4) = 7e-27
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H +MK S++ + I+LRDIK FH FKDG C C DYW
Sbjct: 637 CGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 30.4 bits (67), Expect(4) = 7e-27
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 849 SSKSTLKH*TRLVDWYGKAGRFDRPLKYL 763
S + T+KH T +VD G+AGR D L ++
Sbjct: 437 SIEPTMKHYTLIVDLLGRAGRLDEALSFI 465
Score = 21.9 bits (45), Expect(4) = 7e-27
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 300 GEGIRIVKNLRV 265
G IRIVKNLRV
Sbjct: 625 GSTIRIVKNLRV 636
>emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 80.1 bits (196), Expect(4) = 7e-27
Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
Frame = -3
Query: 767 IYFMSVKLDIVLWGSL*FS-QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTV 591
I M + D V+WG+L + +AHK +++A L AEK ++L P YV S V
Sbjct: 378 IQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEP------KHPGSYVFLS-NV 430
Query: 590 GGC*GGANSYEKLSCGEMTR-------MEFHRDSGK*H*FVASDHSHSRSKEI---YEEL 441
G E++ R + G+ H FVA DH+H R++EI EE+
Sbjct: 431 YAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEI 490
Query: 440 ERWGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ WVLHNIEEE+KED+LG H EKL + GL+ST
Sbjct: 491 TASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLIST 535
Score = 56.2 bits (134), Expect(4) = 7e-27
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H +MK S++ + I+LRDIK FH FKDG C C DYW
Sbjct: 550 CGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 590
Score = 30.4 bits (67), Expect(4) = 7e-27
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 849 SSKSTLKH*TRLVDWYGKAGRFDRPLKYL 763
S + T+KH T +VD G+AGR D L ++
Sbjct: 350 SIEPTMKHYTLIVDLLGRAGRLDEALSFI 378
Score = 21.9 bits (45), Expect(4) = 7e-27
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 300 GEGIRIVKNLRV 265
G IRIVKNLRV
Sbjct: 538 GSTIRIVKNLRV 549
>ref|XP_009768191.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840
[Nicotiana sylvestris] gi|698548001|ref|XP_009768192.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g04840 [Nicotiana sylvestris]
gi|698548004|ref|XP_009768194.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g04840
[Nicotiana sylvestris]
Length = 674
Score = 79.0 bits (193), Expect(3) = 3e-26
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS--QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTVGG 585
M ++ D V+WG+L FS +AHK +++A++A++K ++L +V S G
Sbjct: 465 MPLEPDYVIWGAL-FSACRAHKNIEMAKVASQKLLQLEP------KHAGGHVFLSNVYAG 517
Query: 584 C*GGANSYEKLSCGEMTRMEFHRD--------SGK*H*FVASDHSHSRSKEIYEELER-- 435
G + E++ M +D G+ H FVA D++H+R +EIY +LE
Sbjct: 518 A-GRWDDVERVR-SLMKNKNVDKDPGWSSMEVDGQLHTFVAGDNAHTRKQEIYSKLEEII 575
Query: 434 -WGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ H EWVLHNI+EE+KE +LG H EKL + GL+ST
Sbjct: 576 TGAKQHGYMPETEWVLHNIDEEEKEGALGSHSEKLALAFGLIST 619
Score = 60.1 bits (144), Expect(3) = 3e-26
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK VS++ +VI+LRDIK FH FKDG C C DYW
Sbjct: 634 CGDCHSLMKYVSKMSERVIVLRDIKRFHHFKDGVCSCKDYW 674
Score = 28.1 bits (61), Expect(3) = 3e-26
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 849 SSKSTLKH*TRLVDWYGKAGRFDRPLKYL 763
S + T+KH +VD G+AGR D K++
Sbjct: 434 SIEPTMKHYAVVVDLLGRAGRLDEAFKFI 462
>ref|XP_009610515.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840
[Nicotiana tomentosiformis]
Length = 675
Score = 82.8 bits (203), Expect(2) = 4e-25
Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Frame = -3
Query: 767 IYFMSVKLDIVLWGSL*FS--QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWT 594
I M ++ D V+WG+L FS +AHK +++A++A+EK ++L + +V S
Sbjct: 463 IEIMPLEPDYVIWGAL-FSACRAHKNIEMAKIASEKLLQLEP------NHAGGHVFLSNV 515
Query: 593 VGGC*GGANSYEKLSCGEMTRMEFHRD--------SGK*H*FVASDHSHSRSKEIYEELE 438
G G + E++ M +D G+ H FVA D++H+R +EIY +LE
Sbjct: 516 YAGA-GRWDDVERVR-SSMKNKNVDKDPGWSSMEVDGQLHTFVAGDNAHTRKQEIYSKLE 573
Query: 437 R---WGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ H EWVLHNI+EE+KE +LG H EKL + GL+ST
Sbjct: 574 EIITGAKQHGYMPETEWVLHNIDEEEKEGALGSHSEKLALAFGLIST 620
Score = 60.1 bits (144), Expect(2) = 4e-25
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK VS++ +VI+LRDIK FH FKDG C C DYW
Sbjct: 635 CGDCHSLMKYVSKMSQRVIVLRDIKRFHHFKDGVCSCKDYW 675
>ref|XP_007034318.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|590656608|ref|XP_007034319.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
gi|590656611|ref|XP_007034320.1| Tetratricopeptide
repeat-like superfamily protein isoform 1 [Theobroma
cacao] gi|590656614|ref|XP_007034321.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713347|gb|EOY05244.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713348|gb|EOY05245.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713349|gb|EOY05246.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao] gi|508713350|gb|EOY05247.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 682
Score = 73.6 bits (179), Expect(4) = 5e-25
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS-QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTVGGC 582
M + D V WG+L + +AHK +++A L ++ ++L P YV S V
Sbjct: 473 MPMSPDFVTWGALFCACRAHKNIKMAELVSQNLLQLEP------KHPGSYVFLS-NVYAA 525
Query: 581 *GGANSYEKLSCGEMTRM-------EFHRDSGK*H*FVASDHSHSRSKEIY---EELERW 432
G E++ R + G+ H FVA DH+H ++EIY EE+
Sbjct: 526 VGRWEDVERVRMLMQNRAVDKDPGWSYIEVGGEMHSFVAGDHAHKHAREIYLKLEEIVAG 585
Query: 431 GQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ H WVLHNIEEE+KED+LG H EKL + L+ T
Sbjct: 586 TRQHGYMPETGWVLHNIEEEEKEDALGSHSEKLALAFALIRT 627
Score = 56.6 bits (135), Expect(4) = 5e-25
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK S++ + I+LRDIK FH FKDG C C DYW
Sbjct: 642 CGDCHSLMKYASKMSQREIVLRDIKRFHHFKDGACSCGDYW 682
Score = 30.4 bits (67), Expect(4) = 5e-25
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 849 SSKSTLKH*TRLVDWYGKAGRFDRPLKYL 763
S + T+KH T +VD G+AG+ D LK++
Sbjct: 442 SIEPTMKHYTLVVDLLGRAGQLDESLKFI 470
Score = 21.9 bits (45), Expect(4) = 5e-25
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2
Query: 324 LRTSEH*RGEGIRIVKNLRV 265
+RTS G IRIVKNLRV
Sbjct: 625 IRTSP---GTTIRIVKNLRV 641
>emb|CDP11132.1| unnamed protein product [Coffea canephora]
Length = 550
Score = 84.3 bits (207), Expect(2) = 3e-24
Identities = 62/169 (36%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Frame = -3
Query: 767 IYFMSVKLDIVLWGSL*FS--QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWT 594
I M++ D V+WG+L FS +AHK +++A+ +EK ++L YV S
Sbjct: 338 IQCMALTPDFVIWGAL-FSACRAHKNIEMAKYVSEKLLQLEP------KHSGSYVFMSNI 390
Query: 593 VGGC*GGANSYEKLSCGE----------MTRMEFHRDSGK*H*FVASDHSHSRSKEIYEE 444
G G E++ ++ +E H GK H FVA D +H +KEIY +
Sbjct: 391 YAGV-GIWEEVERVRTSMKDKGAAKDTGLSHVEVH---GKLHSFVAGDQAHMHTKEIYSK 446
Query: 443 LERW---GQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
LE + H EWVLHNIEEE+KED+LG H EKL + GL+ST
Sbjct: 447 LEEMTNRAREHGYIPETEWVLHNIEEEEKEDALGTHSEKLALAFGLIST 495
Score = 55.8 bits (133), Expect(2) = 3e-24
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK VS++ + I++RDIK FH FKDG C C DYW
Sbjct: 510 CGDCHSLMKHVSKLSQREIVVRDIKRFHHFKDGICSCQDYW 550
>ref|XP_010274081.1| PREDICTED: pentatricopeptide repeat-containing protein At1g04840
[Nelumbo nucifera]
Length = 668
Score = 83.6 bits (205), Expect(3) = 4e-24
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS-QAHKIVQLARLAAEKFVELRL*RFRWLSRPCWYVLWSWTVGGC 582
M +K D V+WG+L + +A+K +++A LA+EK ++L P Y+ S G
Sbjct: 459 MPIKPDFVIWGALFCACRANKNIKMAELASEKLLQLEP------KHPGSYIFLSNIYAGV 512
Query: 581 *GGANSYEKLSCGEMTR-------MEFHRDSGK*H*FVASDHSHSRSKEIYEELERW--- 432
G + E + + + GK H FVA D +H +KEIYE+LE
Sbjct: 513 -GRWDDSESVRIAMRNKGIEKPPGWSYIEVGGKVHYFVAGDQTHKHTKEIYEKLEELTIN 571
Query: 431 GQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
+ EW+ HNIEEE+KEDSLG H EKL GL+ST
Sbjct: 572 ARAQGYLPDTEWIFHNIEEEEKEDSLGSHSEKLALCFGLIST 613
Score = 55.1 bits (131), Expect(3) = 4e-24
Identities = 23/41 (56%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H +MK S + + I+LRDIK FHQFK+G C C DYW
Sbjct: 628 CGDCHSMMKYASEMCHREIILRDIKRFHQFKEGLCTCGDYW 668
Score = 21.2 bits (43), Expect(3) = 4e-24
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 300 GEGIRIVKNLRV 265
G IRIVKNLRV
Sbjct: 616 GMEIRIVKNLRV 627
>ref|XP_010921855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Elaeis guineensis]
Length = 613
Score = 58.9 bits (141), Expect(4) = 8e-22
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Frame = -3
Query: 500 H*FVASDHSHSRSKEIYEELERWG----Q*HWITSMIEWVLHNIEEEDKEDSLGCHGEKL 333
H F++ D SH R KEIY +LE G Q +I E VL++I+EE+KE +LG H EKL
Sbjct: 491 HEFISGDKSHQRYKEIYAKLEELGTRMSQEGYIAGTAE-VLYDIDEEEKERALGHHSEKL 549
Query: 332 VFSLGLLST 306
S GL+ST
Sbjct: 550 AISFGLIST 558
Score = 49.7 bits (117), Expect(4) = 8e-22
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H KL+S+I + I++RD FH FKDG C C+D+W
Sbjct: 573 CSDCHNATKLISKICNREIVVRDRVRFHHFKDGICSCNDFW 613
Score = 39.7 bits (91), Expect(4) = 8e-22
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1
Query: 640 SGG*VVLAGMYCGAGQWEDAEGVQIHMKNCLVEK*RGWSSIEI 512
SG V+L+ +Y G+WED E V+ MK+ +EK G SSIEI
Sbjct: 444 SGDYVLLSNLYASVGKWEDVEKVRRIMKDKGIEKTPGCSSIEI 486
Score = 23.1 bits (48), Expect(4) = 8e-22
Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS-QAHKIVQLA 684
MS+K D+V+W +L + HK V+LA
Sbjct: 407 MSIKPDVVIWRALLGGCRIHKDVELA 432
>ref|XP_010906663.1| PREDICTED: pentatricopeptide repeat-containing protein ELI1,
chloroplastic [Elaeis guineensis]
Length = 639
Score = 55.1 bits (131), Expect(3) = 9e-21
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H +MKL+S+I G+ I++RD FH F DG C C DYW
Sbjct: 599 CTDCHTVMKLISKITGRKIIVRDRNRFHHFVDGSCSCGDYW 639
Score = 53.9 bits (128), Expect(3) = 9e-21
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Frame = -3
Query: 494 FVASDHSHSRSKEIY---EELERWGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFS 324
FV D SH++S+E+Y EEL + H IE VLH++EE +KE +L H EKL +
Sbjct: 519 FVVGDLSHAKSQEMYAMLEELNGLLKAHGYVPQIELVLHDLEELEKERALKVHSEKLAIA 578
Query: 323 LGLLST 306
GL+ST
Sbjct: 579 FGLIST 584
Score = 39.3 bits (90), Expect(3) = 9e-21
Identities = 29/100 (29%), Positives = 46/100 (46%)
Frame = -1
Query: 811 GLVWESREV*PALEISTLCLLSWTLFYGDLYNSLKLTKXXXXXXXXXXXXXXXDFRDSGG 632
GLV E+ E+ + +L + T+ +G L + +L K +SG
Sbjct: 418 GLVDEAYEL-----VRSLKFVPDTVMWGSLLAACRLHKNMALGEKIANYLVGTGLANSGT 472
Query: 631 *VVLAGMYCGAGQWEDAEGVQIHMKNCLVEK*RGWSSIEI 512
V+L+ +Y G WE+ V+ MK V+K G SSIE+
Sbjct: 473 YVLLSNIYAAVGNWEEVARVRTLMKGSGVQKEPGCSSIEV 512
>ref|XP_004300036.2| PREDICTED: pentatricopeptide repeat-containing protein At1g14470
[Fragaria vesca subsp. vesca]
Length = 810
Score = 53.5 bits (127), Expect(4) = 1e-20
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C+D H +K++S + G+ I+LRD FH F DG+C C DYW
Sbjct: 770 CRDCHTAIKMISMLEGRKIILRDNNRFHHFSDGQCSCGDYW 810
Score = 49.3 bits (116), Expect(4) = 1e-20
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = -3
Query: 512 SGK*H*FVASDHSHSRSKEIYEELERWGQ*HWITSMIE---WVLHNIEEEDKEDSLGCHG 342
+GK H F+A D SH S EIY L G+ + I VL +++EE+KE+ +G H
Sbjct: 684 NGKMHKFIAGDRSHEMSDEIYRLLAELGRKLRNSGYIADKACVLRDVDEEEKEEMVGTHS 743
Query: 341 EKLVFSLGLLSTD 303
EKL LL T+
Sbjct: 744 EKLAVCFALLVTE 756
Score = 43.9 bits (102), Expect(4) = 1e-20
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = -1
Query: 733 YGDLYNSLKLTKXXXXXXXXXXXXXXXDFRDSGG*VVLAGMYCGAGQWEDAEGVQIHMKN 554
YG L N+ ++ K + +SG ++L+ MY AG+W+D V+ M+N
Sbjct: 610 YGSLLNASRIHKRIDLAEFAASELFELEPHNSGNYILLSNMYASAGRWDDVVRVREAMRN 669
Query: 553 CLVEK*RGWSSIE 515
V+K GWS +E
Sbjct: 670 AGVKKATGWSWVE 682
Score = 20.4 bits (41), Expect(4) = 1e-20
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2
Query: 291 IRIVKNLRVVK 259
IR+VKNLRV +
Sbjct: 761 IRVVKNLRVCR 771
>ref|XP_008808540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Phoenix dactylifera]
Length = 613
Score = 56.6 bits (135), Expect(4) = 1e-19
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Frame = -3
Query: 500 H*FVASDHSHSRSKEIYEELERWG----Q*HWITSMIEWVLHNIEEEDKEDSLGCHGEKL 333
H F++ D SH + +EIY +LE G + +I E VL++I+EE+KE +LG H EKL
Sbjct: 491 HEFISGDKSHPQHREIYAKLEELGTRMSEEGYIAGTAE-VLYDIDEEEKEQALGHHSEKL 549
Query: 332 VFSLGLLST 306
S GLLST
Sbjct: 550 AISFGLLST 558
Score = 48.1 bits (113), Expect(4) = 1e-19
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H KL+S+I + I++RD FH FKDG C C+D+W
Sbjct: 573 CIDCHNATKLISKICNRGIVVRDRVRFHHFKDGICSCNDFW 613
Score = 38.5 bits (88), Expect(4) = 1e-19
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -1
Query: 640 SGG*VVLAGMYCGAGQWEDAEGVQIHMKNCLVEK*RGWSSIEI 512
SG V+L+ +Y G+W D E V++ MK+ +EK G SSIEI
Sbjct: 444 SGDYVLLSNLYASVGRWGDVEKVRMIMKDKGIEKTPGCSSIEI 486
Score = 20.4 bits (41), Expect(4) = 1e-19
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 300 GEGIRIVKNLRV 265
G +RIVKNLR+
Sbjct: 561 GTPLRIVKNLRI 572
>ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein
SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 58.2 bits (139), Expect(4) = 2e-19
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H K +S++FG+ I++RD++ FH FKDG C C DYW
Sbjct: 765 CVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 51.2 bits (121), Expect(4) = 2e-19
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Frame = -3
Query: 506 K*H*FVASDHSHSRSKEIYEELERWGQ*HWITSMIEW---------VLHNIEEEDKEDSL 354
K H FV D SH +S+ IY ELER + IE VLH++EEE KE L
Sbjct: 681 KVHEFVVRDRSHPQSEAIYAELER------VMGAIERAGYRAVTGEVLHDVEEEQKEQLL 734
Query: 353 GCHGEKLVFSLGLLSTDE 300
H EKL + G++ST +
Sbjct: 735 RFHSEKLAIAFGMMSTPQ 752
Score = 33.1 bits (74), Expect(4) = 2e-19
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = -1
Query: 628 VVLAGMYCGAGQWEDAEGVQIHMKNCLVEK*RGWSSIEI 512
V L +Y AG+WEDA V+ M + + K G SSIEI
Sbjct: 640 VALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEI 678
Score = 20.8 bits (42), Expect(4) = 2e-19
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 303 RGEGIRIVKNLRV 265
+G +R++KNLRV
Sbjct: 752 QGSTLRVIKNLRV 764
>ref|XP_010243344.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Nelumbo nucifera]
Length = 584
Score = 56.6 bits (135), Expect(4) = 2e-19
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = -3
Query: 500 H*FVASDHSHSRSKEIYEELERWGQ*---HWITSMIEWVLHNIEEEDKEDSLGCHGEKLV 330
H FV D SH ++EIYE L++ G+ S VLH+I+EE+KE +LG H E+L
Sbjct: 462 HEFVMGDDSHPETEEIYEMLDQMGRRLKQEGYASTTNDVLHDIDEEEKEHALGLHSERLA 521
Query: 329 FSLGLLSTDE 300
+ GLL T E
Sbjct: 522 IAYGLLRTPE 531
Score = 48.9 bits (115), Expect(4) = 2e-19
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C+D H + KL+S I+ + I +RD FH F+ G+C C+DYW
Sbjct: 544 CRDCHSVTKLISGIYKRDITIRDRIRFHHFRGGKCSCNDYW 584
Score = 33.5 bits (75), Expect(4) = 2e-19
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 628 VVLAGMYCGAGQWEDAEGVQIHMKNCLVEK*RGWSSIEI 512
V+++ +Y G+W D ++ MK K GWSSIE+
Sbjct: 419 VLVSNVYASLGKWSDVGKIRRLMKRKQARKEHGWSSIEV 457
Score = 23.9 bits (50), Expect(4) = 2e-19
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2
Query: 324 LRTSEH*RGEGIRIVKNLRVVK 259
LRT E G IRIVKNLRV +
Sbjct: 527 LRTPE---GSPIRIVKNLRVCR 545
>ref|XP_011627462.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Amborella trichopoda]
Length = 506
Score = 55.1 bits (131), Expect(4) = 2e-19
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = -3
Query: 500 H*FVASDHSHSRSKEIYE---ELERWGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLV 330
H FV+ D +H R EIYE EL+R + + VL++IEEE+KE++LG H EKL
Sbjct: 384 HEFVSGDKTHPRYGEIYEKLDELKRKLKKEGYLAETGMVLYDIEEEEKEEALGHHSEKLA 443
Query: 329 FSLGLLST 306
LGL+ST
Sbjct: 444 IGLGLIST 451
Score = 49.3 bits (116), Expect(4) = 2e-19
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H + KL+S I+G+ I++RD FH F G C C DYW
Sbjct: 466 CSDCHSVTKLISLIYGREIVVRDRIRFHHFNYGTCSCKDYW 506
Score = 37.4 bits (85), Expect(4) = 2e-19
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1
Query: 640 SGG*VVLAGMYCGAGQWEDAEGVQIHMKNCLVEK*RGWSSIE 515
SG V+L+ +Y AG+W D V+ M+ ++K GWSSIE
Sbjct: 337 SGDYVLLSNIYASAGRWVDVSRVRKMMQESGIKKVPGWSSIE 378
Score = 21.2 bits (43), Expect(4) = 2e-19
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2
Query: 300 GEGIRIVKNLRV 265
G +RIVKNLRV
Sbjct: 454 GSTLRIVKNLRV 465
>ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein
SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 58.2 bits (139), Expect(4) = 4e-19
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H K +S++FG+ I++RD++ FH FKDG C C DYW
Sbjct: 765 CVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805
Score = 51.2 bits (121), Expect(4) = 4e-19
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Frame = -3
Query: 506 K*H*FVASDHSHSRSKEIYEELERWGQ*HWITSMIEW---------VLHNIEEEDKEDSL 354
K H FV D SH +S+ IY ELER + IE VLH++EEE KE L
Sbjct: 681 KVHEFVVRDRSHPQSEAIYAELER------VMGAIERAGYRAVTGEVLHDVEEEQKEQLL 734
Query: 353 GCHGEKLVFSLGLLSTDE 300
H EKL + G++ST +
Sbjct: 735 RFHSEKLAIAFGMMSTPQ 752
Score = 32.0 bits (71), Expect(4) = 4e-19
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 628 VVLAGMYCGAGQWEDAEGVQIHMKNCLVEK*RGWSSIEI 512
V L +Y AG+W+DA V+ M + + K G SSIEI
Sbjct: 640 VALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEI 678
Score = 20.8 bits (42), Expect(4) = 4e-19
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 303 RGEGIRIVKNLRV 265
+G +R++KNLRV
Sbjct: 752 QGSTLRVIKNLRV 764
>ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prunus persica]
gi|462422105|gb|EMJ26368.1| hypothetical protein
PRUPE_ppa002283mg [Prunus persica]
Length = 692
Score = 51.6 bits (122), Expect(3) = 9e-19
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = -3
Query: 509 GK*H*FVASDHSHSRSKEIYEELERWGQ*HWITSMIE---WVLHNIEEEDKEDSLGCHGE 339
GK H F+ D SH RS ++Y L G+ + + VL ++EEE+KE+ +G H E
Sbjct: 567 GKLHKFIVGDKSHERSDDVYRVLAELGRKMRNSGYMADKTCVLRDVEEEEKEEMVGTHSE 626
Query: 338 KLVFSLGLLSTDEE 297
KL LL TD E
Sbjct: 627 KLAVCFALLVTDAE 640
Score = 50.4 bits (119), Expect(3) = 9e-19
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H MK++S + G+ I+LRD FH F DG C C DYW
Sbjct: 652 CWDCHTAMKMISNLEGRKIILRDNNRFHCFSDGICSCGDYW 692
Score = 39.3 bits (90), Expect(3) = 9e-19
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = -1
Query: 733 YGDLYNSLKLTKXXXXXXXXXXXXXXXDFRDSGG*VVLAGMYCGAGQWEDAEGVQIHMKN 554
YG L N+ ++ K + +SG ++L+ +Y AG+W+D V+ M+
Sbjct: 492 YGSLLNASRIHKRIDLGEFAASTLFELEPHNSGNYILLSNIYASAGRWDDVVRVRELMRK 551
Query: 553 CLVEK*RGWSSIE 515
V+K GWS +E
Sbjct: 552 VGVKKATGWSWVE 564
>ref|XP_002300166.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222847424|gb|EEE84971.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 719
Score = 65.1 bits (157), Expect(2) = 1e-18
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Frame = -3
Query: 758 MSVKLDIVLWGSL*FS-QAHKIVQLARLAAEKFVELR---L*RFRWLSRPCWYVLWSWT- 594
M + D V+WG+L + +AHK ++A+ A K ++L + +LS + L W
Sbjct: 510 MPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSN-AYAALGQWED 568
Query: 593 -----VGGC*GGANSYEKLSCGEMTRMEFHRDSGK*H*FVASDHSHSRSKEI---YEELE 438
V G + SC E+ G+ H FV+ DH H SK I EE+
Sbjct: 569 AERVRVLMQNRGVHKNSGWSCIEV--------EGQVHRFVSGDHDHKDSKAICLKLEEIM 620
Query: 437 RWGQ*HWITSMIEWVLHNIEEEDKEDSLGCHGEKLVFSLGLLST 306
EWVLHN+E+E+KED LG HGEKL + L+ T
Sbjct: 621 AGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICT 664
Score = 56.2 bits (134), Expect(2) = 1e-18
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = -1
Query: 265 CKDWHYLMKLVSRIFGKVIMLRDIKWFHQFKDGECLCSDYW 143
C D H LMK S+I + IMLRD+K FH FKDG C C D+W
Sbjct: 679 CGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719